RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 ADCY3O60266 1144 aa18.03■□□□□ 0.48
TOM1-215ENST00000491987 PEX10O60683 326 aa18.03■□□□□ 0.48
TOM1-215ENST00000491987 USP14P54578 494 aa18.03■□□□□ 0.48
TOM1-215ENST00000491987 C12orf60Q5U649 245 aa18.03■□□□□ 0.48
TOM1-215ENST00000491987 SLAIN1Q8ND83 568 aa18.03■□□□□ 0.48
TOM1-215ENST00000491987 APPBP2Q92624 585 aa18.03■□□□□ 0.48
TOM1-215ENST00000491987 TAOK2Q9UL54 1235 aa18.03■□□□□ 0.48
TOM1-215ENST00000491987 ELNP15502 786 aa18.02■□□□□ 0.48
TOM1-215ENST00000491987 VCAM1P19320 739 aa18.02■□□□□ 0.48
TOM1-215ENST00000491987 ANKRD45Q5TZF3 282 aa18.02■□□□□ 0.48
TOM1-215ENST00000491987 OSBP2Q969R2 916 aa18.02■□□□□ 0.48
TOM1-215ENST00000491987 STRBPQ96SI9 672 aaKnown RBP18.02■□□□□ 0.48
TOM1-215ENST00000491987 PAGR1Q9BTK6 254 aa18.02■□□□□ 0.48
TOM1-215ENST00000491987 TXNRD2Q9NNW7 524 aa18.02■□□□□ 0.48
TOM1-215ENST00000491987 ZBTB47Q9UFB7 747 aaPredicted RBP18.02■□□□□ 0.48
TOM1-215ENST00000491987 BRCA2P51587 3418 aa18.01■□□□□ 0.47
TOM1-215ENST00000491987 USP17L15C9J2P7 530 aa18.01■□□□□ 0.47
TOM1-215ENST00000491987 USP17L13C9JLJ4 530 aa18.01■□□□□ 0.47
TOM1-215ENST00000491987 USP17L11C9JVI0 530 aa18.01■□□□□ 0.47
TOM1-215ENST00000491987 USP17L18D6R9N7 530 aa18.01■□□□□ 0.47
TOM1-215ENST00000491987 USP17L22D6RA61 530 aa18.01■□□□□ 0.47
TOM1-215ENST00000491987 USP17L17D6RBQ6 530 aa18.01■□□□□ 0.47
TOM1-215ENST00000491987 USP17L19D6RCP7 530 aa18.01■□□□□ 0.47
TOM1-215ENST00000491987 USP17L20D6RJB6 530 aa18.01■□□□□ 0.47
TOM1-215ENST00000491987 GLRX3O76003 335 aaKnown RBP18.01■□□□□ 0.47
TOM1-215ENST00000491987 ZFYP08048 801 aaPredicted RBP18.01■□□□□ 0.47
TOM1-215ENST00000491987 CCL5P13501 91 aa18.01■□□□□ 0.47
TOM1-215ENST00000491987 AKR1B1P15121 316 aa18.01■□□□□ 0.47
TOM1-215ENST00000491987 MX1P20591 662 aa18.01■□□□□ 0.47
TOM1-215ENST00000491987 CDK8P49336 464 aa18.01■□□□□ 0.47
TOM1-215ENST00000491987 UBXN2AP68543 259 aa18.01■□□□□ 0.47
TOM1-215ENST00000491987 USP17L24Q0WX57 530 aa18.01■□□□□ 0.47
TOM1-215ENST00000491987 HDAC1Q13547 482 aaPredicted RBP18.01■□□□□ 0.47
TOM1-215ENST00000491987 IRF5Q13568 498 aa18.01■□□□□ 0.47
TOM1-215ENST00000491987 CTR9Q6PD62 1173 aa18.01■□□□□ 0.47
TOM1-215ENST00000491987 TMEM179Q6ZVK1 233 aa18.01■□□□□ 0.47
TOM1-215ENST00000491987 RBPJLQ9UBG7 517 aa18.01■□□□□ 0.47
TOM1-215ENST00000491987 A0A1W2PRG0 241 aa18■□□□□ 0.47
TOM1-215ENST00000491987 M0R2C6 588 aa18■□□□□ 0.47
TOM1-215ENST00000491987 GPAA1O43292 621 aa18■□□□□ 0.47
TOM1-215ENST00000491987 C16orf86Q6ZW13 317 aa18■□□□□ 0.47
TOM1-215ENST00000491987 CLEC10AQ8IUN9 316 aa18■□□□□ 0.47
TOM1-215ENST00000491987 GPRC5AQ8NFJ5 357 aa18■□□□□ 0.47
TOM1-215ENST00000491987 GCC1Q96CN9 775 aa18■□□□□ 0.47
TOM1-215ENST00000491987 ARPP21Q9UBL0 812 aaPredicted RBP18■□□□□ 0.47
TOM1-215ENST00000491987 MYH8P13535 1937 aa18■□□□□ 0.47
TOM1-215ENST00000491987 SALL3Q9BXA9 1300 aa17.99■□□□□ 0.47
TOM1-215ENST00000491987 GSG1L2A8MUP6 293 aa17.99■□□□□ 0.47
TOM1-215ENST00000491987 ERVK-9P63128 1117 aa17.99■□□□□ 0.47
TOM1-215ENST00000491987 ERVK-24P63145 666 aa17.99■□□□□ 0.47
TOM1-215ENST00000491987 LRRFIP1Q32MZ4 808 aaKnown RBP17.99■□□□□ 0.47
TOM1-215ENST00000491987 POTEEQ6S8J3 1075 aa17.99■□□□□ 0.47
TOM1-215ENST00000491987 CATSPERGQ6ZRH7 1159 aa17.99■□□□□ 0.47
TOM1-215ENST00000491987 PXYLP1Q8TE99 480 aa17.99■□□□□ 0.47
TOM1-215ENST00000491987 GTF3C2Q8WUA4 911 aaPredicted RBP17.99■□□□□ 0.47
TOM1-215ENST00000491987 FSD1Q9BTV5 496 aa17.99■□□□□ 0.47
TOM1-215ENST00000491987 RPAP3Q9H6T3 665 aaPredicted RBP17.99■□□□□ 0.47
TOM1-215ENST00000491987 INHAP05111 366 aa17.98■□□□□ 0.47
TOM1-215ENST00000491987 ICA1Q05084 483 aa17.98■□□□□ 0.47
TOM1-215ENST00000491987 Q3C1V9 767 aa17.98■□□□□ 0.47
TOM1-215ENST00000491987 CCDC17Q96LX7 622 aa17.98■□□□□ 0.47
TOM1-215ENST00000491987 RNF208Q9H0X6 261 aa17.98■□□□□ 0.47
TOM1-215ENST00000491987 UNC93B1Q9H1C4 597 aa17.98■□□□□ 0.47
TOM1-215ENST00000491987 MINDY4BA8MYZ0 360 aa17.97■□□□□ 0.47
TOM1-215ENST00000491987 GIMAP6Q6P9H5 292 aa17.97■□□□□ 0.47
TOM1-215ENST00000491987 STK11IPQ8N1F8 1099 aa17.97■□□□□ 0.47
TOM1-215ENST00000491987 SHISA4Q96DD7 197 aa17.97■□□□□ 0.47
TOM1-215ENST00000491987 SEC62Q99442 399 aaKnown RBP17.97■□□□□ 0.47
TOM1-215ENST00000491987 PORCNQ9H237 461 aa17.97■□□□□ 0.47
TOM1-215ENST00000491987 ARHGEF10LQ9HCE6 1279 aa17.97■□□□□ 0.47
TOM1-215ENST00000491987 EPB41L4AQ9HCS5 686 aaPredicted RBP17.97■□□□□ 0.47
TOM1-215ENST00000491987 GJD2Q9UKL4 321 aa17.97■□□□□ 0.47
TOM1-215ENST00000491987 KIAA0100Q14667 2235 aaKnown RBP17.96■□□□□ 0.47
TOM1-215ENST00000491987 CNMDO75829 334 aa17.96■□□□□ 0.47
TOM1-215ENST00000491987 GJB1P08034 283 aa17.96■□□□□ 0.47
TOM1-215ENST00000491987 MAPK4P31152 587 aa17.96■□□□□ 0.47
TOM1-215ENST00000491987 TDO2P48775 406 aa17.96■□□□□ 0.47
TOM1-215ENST00000491987 AAMPQ13685 434 aa17.96■□□□□ 0.47
TOM1-215ENST00000491987 SBK1Q52WX2 424 aa17.96■□□□□ 0.47
TOM1-215ENST00000491987 PRPF38BQ5VTL8 546 aaKnown RBP17.96■□□□□ 0.47
TOM1-215ENST00000491987 SIAH1Q8IUQ4 282 aa17.96■□□□□ 0.47
TOM1-215ENST00000491987 CCAR1Q8IX12 1150 aaKnown RBP17.96■□□□□ 0.47
TOM1-215ENST00000491987 EXOC6Q8TAG9 804 aa17.96■□□□□ 0.47
TOM1-215ENST00000491987 PLXNB2O15031 1838 aa17.95■□□□□ 0.46
TOM1-215ENST00000491987 ROBO3Q96MS0 1386 aa17.95■□□□□ 0.46
TOM1-215ENST00000491987 SPDYE16A6NNV3 312 aaPredicted RBP17.95■□□□□ 0.46
TOM1-215ENST00000491987 APPP05067 770 aa17.95■□□□□ 0.46
TOM1-215ENST00000491987 GNAT2P19087 354 aa17.95■□□□□ 0.46
TOM1-215ENST00000491987 ATP2B2Q01814 1243 aa17.95■□□□□ 0.46
TOM1-215ENST00000491987 KIAA1755Q5JYT7 1200 aa17.95■□□□□ 0.46
TOM1-215ENST00000491987 ZMYM1Q5SVZ6 1142 aa17.95■□□□□ 0.46
TOM1-215ENST00000491987 TANGO6Q9C0B7 1094 aa17.95■□□□□ 0.46
TOM1-215ENST00000491987 SH2D4AQ9H788 454 aa17.95■□□□□ 0.46
TOM1-215ENST00000491987 CWC22Q9HCG8 908 aaKnown RBP17.95■□□□□ 0.46
TOM1-215ENST00000491987 STAP2Q9UGK3 403 aa17.95■□□□□ 0.46
TOM1-215ENST00000491987 TMX2Q9Y320 296 aa17.95■□□□□ 0.46
TOM1-215ENST00000491987 RABGAP1Q9Y3P9 1069 aa17.95■□□□□ 0.46
TOM1-215ENST00000491987 CYP2B6P20813 491 aa17.94■□□□□ 0.46
TOM1-215ENST00000491987 GJA8P48165 433 aa17.94■□□□□ 0.46
TOM1-215ENST00000491987 PDE1AP54750 535 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms