RNA–Protein interactions for RNA: ENST00000491541.1

SREBF2-208, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 1 (best)

Gene SREBF2, Length 4,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-208ENST00000491541 CCDC134Q9H6E4 229 aa11.7□□□□□ -0.54
SREBF2-208ENST00000491541 LRRIQ3A6PVS8 624 aaPredicted RBP11.69□□□□□ -0.54
SREBF2-208ENST00000491541 CTDSPL2Q05D32 466 aa11.69□□□□□ -0.54
SREBF2-208ENST00000491541 PREPLQ4J6C6 727 aaPredicted RBP11.69□□□□□ -0.54
SREBF2-208ENST00000491541 SPATA1Q5VX52 437 aa11.69□□□□□ -0.54
SREBF2-208ENST00000491541 GSDMAQ96QA5 445 aa11.69□□□□□ -0.54
SREBF2-208ENST00000491541 CARD6Q9BX69 1037 aa11.69□□□□□ -0.54
SREBF2-208ENST00000491541 COL16A1Q07092 1604 aaPredicted RBP11.69□□□□□ -0.54
SREBF2-208ENST00000491541 PNPLA7Q6ZV29 1317 aa11.69□□□□□ -0.54
SREBF2-208ENST00000491541 M0R2N6 131 aa11.69□□□□□ -0.54
SREBF2-208ENST00000491541 LIN7AO14910 233 aaPredicted RBP11.69□□□□□ -0.54
SREBF2-208ENST00000491541 SLC3A2P08195 630 aaKnown RBP11.69□□□□□ -0.54
SREBF2-208ENST00000491541 ARID4AP29374 1257 aaPredicted RBP11.69□□□□□ -0.54
SREBF2-208ENST00000491541 KDM7AQ6ZMT4 941 aa11.69□□□□□ -0.54
SREBF2-208ENST00000491541 TMC6Q7Z403 805 aa11.69□□□□□ -0.54
SREBF2-208ENST00000491541 TMEM87BQ96K49 555 aa11.69□□□□□ -0.54
SREBF2-208ENST00000491541 RAI14Q9P0K7 980 aa11.69□□□□□ -0.54
SREBF2-208ENST00000491541 ALS2CLQ60I27 953 aa11.69□□□□□ -0.54
SREBF2-208ENST00000491541 DRC1Q96MC2 740 aa11.69□□□□□ -0.54
SREBF2-208ENST00000491541 JRKLQ9Y4A0 524 aa11.69□□□□□ -0.54
SREBF2-208ENST00000491541 KIF3CO14782 793 aa11.68□□□□□ -0.54
SREBF2-208ENST00000491541 EIF3JO75822 258 aaKnown RBP11.68□□□□□ -0.54
SREBF2-208ENST00000491541 CHMP4BP1P59074 171 aa11.68□□□□□ -0.54
SREBF2-208ENST00000491541 TMTC1Q8IUR5 882 aa11.68□□□□□ -0.54
SREBF2-208ENST00000491541 RETREG2Q8NC44 543 aa11.68□□□□□ -0.54
SREBF2-208ENST00000491541 MAP3K2Q9Y2U5 619 aa11.68□□□□□ -0.54
SREBF2-208ENST00000491541 FNBP4Q8N3X1 1017 aaPredicted RBP11.68□□□□□ -0.54
SREBF2-208ENST00000491541 GDF3Q9NR23 364 aa11.68□□□□□ -0.54
SREBF2-208ENST00000491541 GYPCP04921 128 aa11.68□□□□□ -0.54
SREBF2-208ENST00000491541 RIPK1Q13546 671 aa11.68□□□□□ -0.54
SREBF2-208ENST00000491541 KCNB1Q14721 858 aa11.68□□□□□ -0.54
SREBF2-208ENST00000491541 NPY5RQ15761 445 aa11.68□□□□□ -0.54
SREBF2-208ENST00000491541 ASTE1Q2TB18 679 aaPredicted RBP11.68□□□□□ -0.54
SREBF2-208ENST00000491541 KAT2BQ92831 832 aa11.68□□□□□ -0.54
SREBF2-208ENST00000491541 PYM1Q9BRP8 204 aaKnown RBP11.68□□□□□ -0.54
SREBF2-208ENST00000491541 CCDC9Q9Y3X0 531 aaKnown RBP11.68□□□□□ -0.54
SREBF2-208ENST00000491541 COL4A1P02462 1669 aa11.68□□□□□ -0.54
SREBF2-208ENST00000491541 EIF3HO15372 352 aaKnown RBP eCLIP11.67□□□□□ -0.547e-8■□□□□ 9.7
SREBF2-208ENST00000491541 RNF113AO15541 343 aaKnown RBP11.67□□□□□ -0.54
SREBF2-208ENST00000491541 GHRP10912 638 aa11.67□□□□□ -0.54
SREBF2-208ENST00000491541 IFNAR1P17181 557 aa11.67□□□□□ -0.54
SREBF2-208ENST00000491541 POTEDQ86YR6 584 aa11.67□□□□□ -0.54
SREBF2-208ENST00000491541 ARID2Q68CP9 1835 aa11.67□□□□□ -0.54
SREBF2-208ENST00000491541 CCDC175P0C221 793 aa11.67□□□□□ -0.54
SREBF2-208ENST00000491541 TCEAL1Q15170 157 aa11.67□□□□□ -0.54
SREBF2-208ENST00000491541 AACSQ86V21 672 aa11.67□□□□□ -0.54
SREBF2-208ENST00000491541 CENPTQ96BT3 561 aa11.67□□□□□ -0.54
SREBF2-208ENST00000491541 GPTP24298 496 aa11.67□□□□□ -0.54
SREBF2-208ENST00000491541 SF3A1Q15459 793 aaKnown RBP11.67□□□□□ -0.54
SREBF2-208ENST00000491541 ZNF568Q3ZCX4 644 aa11.67□□□□□ -0.54
SREBF2-208ENST00000491541 ANKRD27Q96NW4 1050 aa11.67□□□□□ -0.54
SREBF2-208ENST00000491541 DEF6Q9H4E7 631 aa11.67□□□□□ -0.54
SREBF2-208ENST00000491541 ROBO3Q96MS0 1386 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 EIF2S2P20042 333 aaKnown RBP11.66□□□□□ -0.54
SREBF2-208ENST00000491541 FMR1Q06787 632 aaKnown RBP eCLIP11.66□□□□□ -0.543e-6■□□□□ 9.2
SREBF2-208ENST00000491541 CCNI2Q6ZMN8 369 aaPredicted RBP11.66□□□□□ -0.54
SREBF2-208ENST00000491541 CNGA4Q8IV77 575 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 MOV10L1Q9BXT6 1211 aaKnown RBP11.66□□□□□ -0.54
SREBF2-208ENST00000491541 TXLNGYQ9BZA5 131 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 EDEM3Q9BZQ6 932 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 EPC1Q9H2F5 836 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 RWDD2AQ9UIY3 292 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 RASSF10A6NK89 507 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 GOLGA8KD6RF30 607 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 ANKRD65E5RJM6 399 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 BIN1O00499 593 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 SLC26A4O43511 780 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 ATP1A3P13637 1013 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 MCM6Q14566 821 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 SMYD5Q6GMV2 418 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 PDXDC2PQ6P474 469 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 CCDC170Q8IYT3 715 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 IQCKQ8N0W5 287 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 EXOC5O00471 708 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 ERLIN1O75477 346 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 ERVK-24P63145 666 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 ICA1Q05084 483 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 PPFIA1Q13136 1202 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 UBE3CQ15386 1083 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 TXNDC2Q86VQ3 553 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 JMYQ8N9B5 988 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 ISCA1Q9BUE6 129 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 RNF14Q9UBS8 474 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 CAPN11Q9UMQ6 739 aa11.66□□□□□ -0.54
SREBF2-208ENST00000491541 ME1P48163 572 aa11.65□□□□□ -0.54
SREBF2-208ENST00000491541 UBASH3AP57075 661 aa11.65□□□□□ -0.54
SREBF2-208ENST00000491541 LRIG3Q6UXM1 1119 aa11.65□□□□□ -0.54
SREBF2-208ENST00000491541 TMEM174Q8WUU8 243 aa11.65□□□□□ -0.54
SREBF2-208ENST00000491541 SHISA4Q96DD7 197 aa11.65□□□□□ -0.54
SREBF2-208ENST00000491541 LOC102724159A0A0B4J2E5 919 aa11.65□□□□□ -0.54
SREBF2-208ENST00000491541 TMEM232C9JQI7 657 aa11.65□□□□□ -0.54
SREBF2-208ENST00000491541 MMP1P03956 469 aa11.65□□□□□ -0.54
SREBF2-208ENST00000491541 VSNL1P62760 191 aa11.65□□□□□ -0.54
SREBF2-208ENST00000491541 ORC2Q13416 577 aaPredicted RBP11.65□□□□□ -0.54
SREBF2-208ENST00000491541 PWP2Q15269 919 aaKnown RBP11.65□□□□□ -0.54
SREBF2-208ENST00000491541 TTLL5Q6EMB2 1281 aa11.65□□□□□ -0.54
SREBF2-208ENST00000491541 PDILTQ8N807 584 aa11.65□□□□□ -0.54
SREBF2-208ENST00000491541 PLBD2Q8NHP8 589 aa11.65□□□□□ -0.54
SREBF2-208ENST00000491541 PIK3R5Q8WYR1 880 aa11.65□□□□□ -0.54
SREBF2-208ENST00000491541 ZNF622Q969S3 477 aaKnown RBP eCLIP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms