RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 SH3D19Q5HYK7 790 aa16.33■□□□□ 0.2
CDK9-204ENST00000491521 TMED8Q6PL24 325 aaPredicted RBP16.33■□□□□ 0.2
CDK9-204ENST00000491521 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.33■□□□□ 0.22e-6■■□□□ 13.9
CDK9-204ENST00000491521 DDX60LQ5H9U9 1706 aaKnown RBP16.33■□□□□ 0.2
CDK9-204ENST00000491521 DOCK3Q8IZD9 2030 aa16.33■□□□□ 0.2
CDK9-204ENST00000491521 MPHOSPH10O00566 681 aaKnown RBP16.32■□□□□ 0.2
CDK9-204ENST00000491521 PRKAB2O43741 272 aa16.32■□□□□ 0.2
CDK9-204ENST00000491521 PEX10O60683 326 aa16.32■□□□□ 0.2
CDK9-204ENST00000491521 ADD2P35612 726 aa16.32■□□□□ 0.2
CDK9-204ENST00000491521 ABCB5Q2M3G0 1257 aa16.32■□□□□ 0.2
CDK9-204ENST00000491521 ZSCAN25Q6NSZ9 544 aa16.32■□□□□ 0.2
CDK9-204ENST00000491521 EHD4Q9H223 541 aa16.32■□□□□ 0.2
CDK9-204ENST00000491521 DIAPH3Q9NSV4 1193 aa16.32■□□□□ 0.2
CDK9-204ENST00000491521 BAZ2AQ9UIF9 1905 aaKnown RBP16.32■□□□□ 0.2
CDK9-204ENST00000491521 HIP1O00291 1037 aa16.31■□□□□ 0.2
CDK9-204ENST00000491521 ELNP15502 786 aa16.31■□□□□ 0.2
CDK9-204ENST00000491521 SHMT1P34896 483 aa16.31■□□□□ 0.2
CDK9-204ENST00000491521 GCLCP48506 637 aaPredicted RBP16.31■□□□□ 0.2
CDK9-204ENST00000491521 FLT3LGP49771 235 aa16.31■□□□□ 0.2
CDK9-204ENST00000491521 FAM110CQ1W6H9 321 aa16.31■□□□□ 0.2
CDK9-204ENST00000491521 TATDN1Q6P1N9 297 aa16.31■□□□□ 0.2
CDK9-204ENST00000491521 COA7Q96BR5 231 aa16.31■□□□□ 0.2
CDK9-204ENST00000491521 P2RX7Q99572 595 aaKnown RBP16.31■□□□□ 0.2
CDK9-204ENST00000491521 CABP5Q9NP86 173 aa16.31■□□□□ 0.2
CDK9-204ENST00000491521 DCP1AQ9NPI6 582 aaPredicted RBP16.31■□□□□ 0.2
CDK9-204ENST00000491521 GINM1Q9NU53 330 aa16.31■□□□□ 0.2
CDK9-204ENST00000491521 C19orf81C9J6K1 198 aa16.3■□□□□ 0.2
CDK9-204ENST00000491521 RNF113AO15541 343 aaKnown RBP16.3■□□□□ 0.2
CDK9-204ENST00000491521 ADCY3O60266 1144 aa16.3■□□□□ 0.2
CDK9-204ENST00000491521 CHMLP26374 656 aa16.3■□□□□ 0.2
CDK9-204ENST00000491521 USP17L2Q6R6M4 530 aa16.3■□□□□ 0.2
CDK9-204ENST00000491521 SLC44A5Q8NCS7 719 aa16.3■□□□□ 0.2
CDK9-204ENST00000491521 ACER1Q8TDN7 264 aa16.3■□□□□ 0.2
CDK9-204ENST00000491521 DYNLL2Q96FJ2 89 aa16.3■□□□□ 0.2
CDK9-204ENST00000491521 EMILIN3Q9NT22 766 aa16.3■□□□□ 0.2
CDK9-204ENST00000491521 MYH8P13535 1937 aa16.29■□□□□ 0.2
CDK9-204ENST00000491521 CYP2D7A0A087X1C5 515 aa16.29■□□□□ 0.2
CDK9-204ENST00000491521 ZFYP08048 801 aaPredicted RBP16.29■□□□□ 0.2
CDK9-204ENST00000491521 CCL5P13501 91 aa16.29■□□□□ 0.2
CDK9-204ENST00000491521 UBXN2AP68543 259 aa16.29■□□□□ 0.2
CDK9-204ENST00000491521 SLAIN1Q8ND83 568 aa16.29■□□□□ 0.2
CDK9-204ENST00000491521 PAGR1Q9BTK6 254 aa16.29■□□□□ 0.2
CDK9-204ENST00000491521 RNF208Q9H0X6 261 aa16.29■□□□□ 0.2
CDK9-204ENST00000491521 HERVK_113P62684 666 aa16.28■□□□□ 0.2
CDK9-204ENST00000491521 SEPT2Q15019 361 aa16.28■□□□□ 0.2
CDK9-204ENST00000491521 PRPF38BQ5VTL8 546 aaKnown RBP16.28■□□□□ 0.2
CDK9-204ENST00000491521 CWC27Q6UX04 472 aaKnown RBP16.28■□□□□ 0.2
CDK9-204ENST00000491521 RUFY2Q8WXA3 655 aa16.28■□□□□ 0.2
CDK9-204ENST00000491521 SLC4A4Q9Y6R1 1079 aa16.28■□□□□ 0.2
CDK9-204ENST00000491521 SMIM22K7EJ46 135 aa16.27■□□□□ 0.2
CDK9-204ENST00000491521 INHAP05111 366 aa16.27■□□□□ 0.2
CDK9-204ENST00000491521 HOXA7P31268 230 aaPredicted RBP16.27■□□□□ 0.2
CDK9-204ENST00000491521 NMIQ13287 307 aaPredicted RBP16.27■□□□□ 0.2
CDK9-204ENST00000491521 TICAM2Q86XR7 235 aa16.27■□□□□ 0.2
CDK9-204ENST00000491521 CCAR1Q8IX12 1150 aaKnown RBP16.27■□□□□ 0.2
CDK9-204ENST00000491521 DDRGK1Q96HY6 314 aa16.27■□□□□ 0.2
CDK9-204ENST00000491521 PUS7LQ9H0K6 701 aaKnown RBP16.27■□□□□ 0.2
CDK9-204ENST00000491521 UNC93B1Q9H1C4 597 aa16.27■□□□□ 0.2
CDK9-204ENST00000491521 TXNRD2Q9NNW7 524 aa16.27■□□□□ 0.2
CDK9-204ENST00000491521 GUCY1A2P33402 732 aa16.26■□□□□ 0.19
CDK9-204ENST00000491521 GABPAQ06546 454 aa16.26■□□□□ 0.19
CDK9-204ENST00000491521 UBE3CQ15386 1083 aa16.26■□□□□ 0.19
CDK9-204ENST00000491521 AMOTL1Q8IY63 956 aa16.26■□□□□ 0.19
CDK9-204ENST00000491521 GPRC5AQ8NFJ5 357 aa16.26■□□□□ 0.19
CDK9-204ENST00000491521 FAM227BQ96M60 508 aa16.26■□□□□ 0.19
CDK9-204ENST00000491521 CWC22Q9HCG8 908 aaKnown RBP16.26■□□□□ 0.19
CDK9-204ENST00000491521 ATP8A2Q9NTI2 1148 aa16.26■□□□□ 0.19
CDK9-204ENST00000491521 USP17L12C9JPN9 530 aa16.25■□□□□ 0.19
CDK9-204ENST00000491521 USP17L21D6R901 530 aa16.25■□□□□ 0.19
CDK9-204ENST00000491521 VCAM1P19320 739 aa16.25■□□□□ 0.19
CDK9-204ENST00000491521 USP14P54578 494 aa16.25■□□□□ 0.19
CDK9-204ENST00000491521 C8orf34Q49A92 452 aa16.25■□□□□ 0.19
CDK9-204ENST00000491521 CLEC10AQ8IUN9 316 aa16.25■□□□□ 0.19
CDK9-204ENST00000491521 STK11IPQ8N1F8 1099 aa16.25■□□□□ 0.19
CDK9-204ENST00000491521 SHISA4Q96DD7 197 aa16.25■□□□□ 0.19
CDK9-204ENST00000491521 MORF4L1Q9UBU8 362 aa16.25■□□□□ 0.19
CDK9-204ENST00000491521 USP17L15C9J2P7 530 aa16.24■□□□□ 0.19
CDK9-204ENST00000491521 USP17L13C9JLJ4 530 aa16.24■□□□□ 0.19
CDK9-204ENST00000491521 USP17L11C9JVI0 530 aa16.24■□□□□ 0.19
CDK9-204ENST00000491521 USP17L18D6R9N7 530 aa16.24■□□□□ 0.19
CDK9-204ENST00000491521 USP17L22D6RA61 530 aa16.24■□□□□ 0.19
CDK9-204ENST00000491521 USP17L17D6RBQ6 530 aa16.24■□□□□ 0.19
CDK9-204ENST00000491521 USP17L19D6RCP7 530 aa16.24■□□□□ 0.19
CDK9-204ENST00000491521 USP17L20D6RJB6 530 aa16.24■□□□□ 0.19
CDK9-204ENST00000491521 AKR1B1P15121 316 aa16.24■□□□□ 0.19
CDK9-204ENST00000491521 USP17L24Q0WX57 530 aa16.24■□□□□ 0.19
CDK9-204ENST00000491521 IRF5Q13568 498 aa16.24■□□□□ 0.19
CDK9-204ENST00000491521 MCMDC2Q4G0Z9 681 aa16.24■□□□□ 0.19
CDK9-204ENST00000491521 ZMYM1Q5SVZ6 1142 aa16.24■□□□□ 0.19
CDK9-204ENST00000491521 APPBP2Q92624 585 aa16.24■□□□□ 0.19
CDK9-204ENST00000491521 SEC62Q99442 399 aaKnown RBP16.24■□□□□ 0.19
CDK9-204ENST00000491521 ESYT1Q9BSJ8 1104 aa16.24■□□□□ 0.19
CDK9-204ENST00000491521 KIAA1683Q9H0B3 1180 aa16.24■□□□□ 0.19
CDK9-204ENST00000491521 RPAP3Q9H6T3 665 aaPredicted RBP16.24■□□□□ 0.19
CDK9-204ENST00000491521 HELLSQ9NRZ9 838 aa16.24■□□□□ 0.19
CDK9-204ENST00000491521 RBPJLQ9UBG7 517 aa16.24■□□□□ 0.19
CDK9-204ENST00000491521 SWAP70Q9UH65 585 aa16.24■□□□□ 0.19
CDK9-204ENST00000491521 CEP290O15078 2479 aa16.23■□□□□ 0.19
CDK9-204ENST00000491521 A0A0D9SFI3 127 aa16.23■□□□□ 0.19
CDK9-204ENST00000491521 EIF5BO60841 1220 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms