RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 C7orf61Q8IZ16 206 aa10.32□□□□□ -0.76
APOBEC3F-204ENST00000491387 PANK1Q8TE04 598 aa10.32□□□□□ -0.76
APOBEC3F-204ENST00000491387 TRIM34Q9BYJ4 488 aa10.32□□□□□ -0.76
APOBEC3F-204ENST00000491387 KIAA1683Q9H0B3 1180 aa10.32□□□□□ -0.76
APOBEC3F-204ENST00000491387 PORCNQ9H237 461 aa10.32□□□□□ -0.76
APOBEC3F-204ENST00000491387 SLC15A5A6NIM6 579 aa10.31□□□□□ -0.76
APOBEC3F-204ENST00000491387 PEX10O60683 326 aa10.31□□□□□ -0.76
APOBEC3F-204ENST00000491387 CNMDO75829 334 aa10.31□□□□□ -0.76
APOBEC3F-204ENST00000491387 GH2P01242 217 aa10.31□□□□□ -0.76
APOBEC3F-204ENST00000491387 CYP7A1P22680 504 aa10.31□□□□□ -0.76
APOBEC3F-204ENST00000491387 MAGEA10P43363 369 aaPredicted RBP10.31□□□□□ -0.76
APOBEC3F-204ENST00000491387 USP14P54578 494 aa10.31□□□□□ -0.76
APOBEC3F-204ENST00000491387 DYNLL1P63167 89 aaKnown RBP10.31□□□□□ -0.76
APOBEC3F-204ENST00000491387 CCNA1P78396 465 aa10.31□□□□□ -0.76
APOBEC3F-204ENST00000491387 MAP2K5Q13163 448 aa10.31□□□□□ -0.76
APOBEC3F-204ENST00000491387 CATSPERGQ6ZRH7 1159 aa10.31□□□□□ -0.76
APOBEC3F-204ENST00000491387 TTC6Q86TZ1 520 aa10.31□□□□□ -0.76
APOBEC3F-204ENST00000491387 EAF2Q96CJ1 260 aaPredicted RBP10.31□□□□□ -0.76
APOBEC3F-204ENST00000491387 SERPINB13Q9UIV8 391 aa10.31□□□□□ -0.76
APOBEC3F-204ENST00000491387 ZMYND8Q9ULU4 1186 aaPredicted RBP10.31□□□□□ -0.76
APOBEC3F-204ENST00000491387 GLRX3O76003 335 aaKnown RBP10.3□□□□□ -0.76
APOBEC3F-204ENST00000491387 OS9Q13438 667 aaPredicted RBP10.3□□□□□ -0.76
APOBEC3F-204ENST00000491387 CCL14Q16627 93 aa10.3□□□□□ -0.76
APOBEC3F-204ENST00000491387 TDHQ8IZJ6 230 aa10.3□□□□□ -0.76
APOBEC3F-204ENST00000491387 SLC17A8Q8NDX2 589 aa10.3□□□□□ -0.76
APOBEC3F-204ENST00000491387 TLR7Q9NYK1 1049 aaKnown RBP10.3□□□□□ -0.76
APOBEC3F-204ENST00000491387 SAP30BPQ9UHR5 308 aaKnown RBP10.3□□□□□ -0.76
APOBEC3F-204ENST00000491387 PARP14Q460N5 1801 aa10.29□□□□□ -0.76
APOBEC3F-204ENST00000491387 MSCO60682 206 aa10.29□□□□□ -0.76
APOBEC3F-204ENST00000491387 IDH1O75874 414 aaKnown RBP10.29□□□□□ -0.76
APOBEC3F-204ENST00000491387 VCAM1P19320 739 aa10.29□□□□□ -0.76
APOBEC3F-204ENST00000491387 PTPREP23469 700 aa10.29□□□□□ -0.76
APOBEC3F-204ENST00000491387 CCND3P30281 292 aaPredicted RBP10.29□□□□□ -0.76
APOBEC3F-204ENST00000491387 SHMT1P34896 483 aa10.29□□□□□ -0.76
APOBEC3F-204ENST00000491387 GABPAQ06546 454 aa10.29□□□□□ -0.76
APOBEC3F-204ENST00000491387 MAP3K12Q12852 859 aa10.29□□□□□ -0.76
APOBEC3F-204ENST00000491387 GRB14Q14449 540 aa10.29□□□□□ -0.76
APOBEC3F-204ENST00000491387 CERKLQ49MI3 558 aaPredicted RBP10.29□□□□□ -0.76
APOBEC3F-204ENST00000491387 CCAR1Q8IX12 1150 aaKnown RBP10.29□□□□□ -0.76
APOBEC3F-204ENST00000491387 EDC3Q96F86 508 aaKnown RBP10.29□□□□□ -0.76
APOBEC3F-204ENST00000491387 RIOK1Q9BRS2 568 aaKnown RBP10.29□□□□□ -0.76
APOBEC3F-204ENST00000491387 PAGR1Q9BTK6 254 aa10.29□□□□□ -0.76
APOBEC3F-204ENST00000491387 CCDC8Q9H0W5 538 aaPredicted RBP10.29□□□□□ -0.76
APOBEC3F-204ENST00000491387 SYN1P17600 705 aa10.28□□□□□ -0.76
APOBEC3F-204ENST00000491387 GUCY1A2P33402 732 aa10.28□□□□□ -0.76
APOBEC3F-204ENST00000491387 USP5P45974 858 aa10.28□□□□□ -0.76
APOBEC3F-204ENST00000491387 LRRC26Q2I0M4 334 aa10.28□□□□□ -0.76
APOBEC3F-204ENST00000491387 ABCB5Q2M3G0 1257 aa10.28□□□□□ -0.76
APOBEC3F-204ENST00000491387 MFSD14CQ5VZR4 134 aa10.28□□□□□ -0.76
APOBEC3F-204ENST00000491387 FAM109BQ6ICB4 259 aaPredicted RBP10.28□□□□□ -0.76
APOBEC3F-204ENST00000491387 ERC1Q8IUD2 1116 aa10.28□□□□□ -0.76
APOBEC3F-204ENST00000491387 ITPRIPQ8IWB1 547 aa10.28□□□□□ -0.76
APOBEC3F-204ENST00000491387 DEFB123Q8N688 67 aa10.28□□□□□ -0.76
APOBEC3F-204ENST00000491387 MAGEB6Q8N7X4 407 aa10.28□□□□□ -0.76
APOBEC3F-204ENST00000491387 ACER1Q8TDN7 264 aa10.28□□□□□ -0.76
APOBEC3F-204ENST00000491387 FEZ1Q99689 392 aa10.28□□□□□ -0.76
APOBEC3F-204ENST00000491387 UBE2OQ9C0C9 1292 aaKnown RBP10.28□□□□□ -0.76
APOBEC3F-204ENST00000491387 MTMR10Q9NXD2 777 aa10.28□□□□□ -0.76
APOBEC3F-204ENST00000491387 FLRT1Q9NZU1 646 aa10.28□□□□□ -0.76
APOBEC3F-204ENST00000491387 STXBP5LQ9Y2K9 1186 aa10.28□□□□□ -0.76
APOBEC3F-204ENST00000491387 NDUFB9Q9Y6M9 179 aa10.28□□□□□ -0.76
APOBEC3F-204ENST00000491387 FRMPD3Q5JV73 1810 aa10.28□□□□□ -0.76
APOBEC3F-204ENST00000491387 ZNF236Q9UL36 1845 aa10.28□□□□□ -0.76
APOBEC3F-204ENST00000491387 SPDYE16A6NNV3 312 aaPredicted RBP10.27□□□□□ -0.77
APOBEC3F-204ENST00000491387 DLL1O00548 723 aa10.27□□□□□ -0.77
APOBEC3F-204ENST00000491387 STRNO43815 780 aa10.27□□□□□ -0.77
APOBEC3F-204ENST00000491387 PLCD1P51178 756 aa10.27□□□□□ -0.77
APOBEC3F-204ENST00000491387 OLFML2BQ68BL8 750 aa10.27□□□□□ -0.77
APOBEC3F-204ENST00000491387 CEP85Q6P2H3 762 aa10.27□□□□□ -0.77
APOBEC3F-204ENST00000491387 MIGA1Q8NAN2 632 aa10.27□□□□□ -0.77
APOBEC3F-204ENST00000491387 SHCBP1Q8NEM2 672 aa10.27□□□□□ -0.77
APOBEC3F-204ENST00000491387 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.27□□□□□ -0.77
APOBEC3F-204ENST00000491387 LPAR1Q92633 364 aa10.27□□□□□ -0.77
APOBEC3F-204ENST00000491387 ANTXR1Q9H6X2 564 aa10.27□□□□□ -0.77
APOBEC3F-204ENST00000491387 CABP5Q9NP86 173 aa10.27□□□□□ -0.77
APOBEC3F-204ENST00000491387 HOXC10Q9NYD6 342 aa10.27□□□□□ -0.77
APOBEC3F-204ENST00000491387 BTBD7Q9P203 1132 aa10.27□□□□□ -0.77
APOBEC3F-204ENST00000491387 DDX20Q9UHI6 824 aaKnown RBP10.27□□□□□ -0.77
APOBEC3F-204ENST00000491387 COL11A1P12107 1806 aaPredicted RBP10.27□□□□□ -0.77
APOBEC3F-204ENST00000491387 RLFQ13129 1914 aa10.27□□□□□ -0.77
APOBEC3F-204ENST00000491387 DNAH12Q6ZR08 3092 aa10.26□□□□□ -0.77
APOBEC3F-204ENST00000491387 POTEB2H3BUK9 544 aa10.26□□□□□ -0.77
APOBEC3F-204ENST00000491387 DNM1LO00429 736 aa10.26□□□□□ -0.77
APOBEC3F-204ENST00000491387 CYBAP13498 195 aa10.26□□□□□ -0.77
APOBEC3F-204ENST00000491387 COG2Q14746 738 aa10.26□□□□□ -0.77
APOBEC3F-204ENST00000491387 RAB3GAP1Q15042 981 aa10.26□□□□□ -0.77
APOBEC3F-204ENST00000491387 TTF1Q15361 905 aaPredicted RBP10.26□□□□□ -0.77
APOBEC3F-204ENST00000491387 HSP90AB4PQ58FF6 505 aa10.26□□□□□ -0.77
APOBEC3F-204ENST00000491387 C20orf194Q5TEA3 1177 aa10.26□□□□□ -0.77
APOBEC3F-204ENST00000491387 FTSJ3Q8IY81 847 aaKnown RBP10.26□□□□□ -0.77
APOBEC3F-204ENST00000491387 ABRAQ8N0Z2 381 aa10.26□□□□□ -0.77
APOBEC3F-204ENST00000491387 IVNS1ABPQ9Y6Y0 642 aa10.26□□□□□ -0.77
APOBEC3F-204ENST00000491387 MAGEB6P1A0A0J9YX57 407 aa10.25□□□□□ -0.77
APOBEC3F-204ENST00000491387 A0A1W2PRG0 241 aa10.25□□□□□ -0.77
APOBEC3F-204ENST00000491387 PDE6AP16499 860 aa10.25□□□□□ -0.77
APOBEC3F-204ENST00000491387 ATP2B2Q01814 1243 aa10.25□□□□□ -0.77
APOBEC3F-204ENST00000491387 SEPT2Q15019 361 aa10.25□□□□□ -0.77
APOBEC3F-204ENST00000491387 ZYXQ15942 572 aaKnown RBP10.25□□□□□ -0.77
APOBEC3F-204ENST00000491387 AACSQ86V21 672 aa10.25□□□□□ -0.77
APOBEC3F-204ENST00000491387 MB21D1Q8N884 522 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms