RNA–Protein interactions for RNA: ENST00000491292.5

ERCC3-208, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 4,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-208ENST00000491292 TBC1D10CQ8IV04 446 aa11.06□□□□□ -0.64
ERCC3-208ENST00000491292 IFNL2Q8IZJ0 200 aa11.06□□□□□ -0.64
ERCC3-208ENST00000491292 CCDC42Q96M95 316 aa11.06□□□□□ -0.64
ERCC3-208ENST00000491292 JPH2Q9BR39 696 aaPredicted RBP11.06□□□□□ -0.64
ERCC3-208ENST00000491292 MMRN2Q9H8L6 949 aa11.06□□□□□ -0.64
ERCC3-208ENST00000491292 MED4Q9NPJ6 270 aa11.06□□□□□ -0.64
ERCC3-208ENST00000491292 HPS5Q9UPZ3 1129 aa11.06□□□□□ -0.64
ERCC3-208ENST00000491292 NRKQ7Z2Y5 1582 aa11.05□□□□□ -0.64
ERCC3-208ENST00000491292 CCDC196A0A1B0GTZ2 297 aa11.05□□□□□ -0.64
ERCC3-208ENST00000491292 FRMD3A2A2Y4 597 aa11.05□□□□□ -0.64
ERCC3-208ENST00000491292 ZNF185O15231 689 aa11.05□□□□□ -0.64
ERCC3-208ENST00000491292 CYLC1P35663 651 aaPredicted RBP11.05□□□□□ -0.64
ERCC3-208ENST00000491292 L1RE1Q9UN81 338 aa11.05□□□□□ -0.64
ERCC3-208ENST00000491292 GOLGA6L7A0A1B0GV03 622 aa11.05□□□□□ -0.64
ERCC3-208ENST00000491292 SNAP23O00161 211 aa11.05□□□□□ -0.64
ERCC3-208ENST00000491292 STAT6P42226 847 aa11.05□□□□□ -0.64
ERCC3-208ENST00000491292 PDCLQ13371 301 aa11.05□□□□□ -0.64
ERCC3-208ENST00000491292 FAM169AQ9Y6X4 670 aa11.05□□□□□ -0.64
ERCC3-208ENST00000491292 RIMS1Q86UR5 1692 aaKnown RBP11.05□□□□□ -0.64
ERCC3-208ENST00000491292 KCNJ18B7U540 433 aa11.05□□□□□ -0.64
ERCC3-208ENST00000491292 USO1O60763 962 aaKnown RBP11.05□□□□□ -0.64
ERCC3-208ENST00000491292 BMP6P22004 513 aa11.05□□□□□ -0.64
ERCC3-208ENST00000491292 PPARAQ07869 468 aa11.05□□□□□ -0.64
ERCC3-208ENST00000491292 KCNJ12Q14500 433 aa11.05□□□□□ -0.64
ERCC3-208ENST00000491292 KIFC2Q96AC6 838 aa11.05□□□□□ -0.64
ERCC3-208ENST00000491292 MMS19Q96T76 1030 aa11.05□□□□□ -0.64
ERCC3-208ENST00000491292 TEX13AQ9BXU3 409 aaPredicted RBP11.05□□□□□ -0.64
ERCC3-208ENST00000491292 SLC52A2Q9HAB3 445 aa11.05□□□□□ -0.64
ERCC3-208ENST00000491292 STRN4Q9NRL3 753 aa11.05□□□□□ -0.64
ERCC3-208ENST00000491292 OVOS2A0A0J9YW53 1432 aa11.05□□□□□ -0.64
ERCC3-208ENST00000491292 OVOS2Q6IE36 1432 aa11.05□□□□□ -0.64
ERCC3-208ENST00000491292 A2ML1A8K2U0 1454 aa11.04□□□□□ -0.64
ERCC3-208ENST00000491292 TBC1D8BQ0IIM8 1120 aa11.04□□□□□ -0.64
ERCC3-208ENST00000491292 PAK1Q13153 545 aa11.04□□□□□ -0.64
ERCC3-208ENST00000491292 TTF1Q15361 905 aaPredicted RBP11.04□□□□□ -0.64
ERCC3-208ENST00000491292 KIF6Q6ZMV9 814 aa11.04□□□□□ -0.64
ERCC3-208ENST00000491292 MB21D2Q8IYB1 491 aaPredicted RBP11.04□□□□□ -0.64
ERCC3-208ENST00000491292 THEMISQ8N1K5 641 aaPredicted RBP11.04□□□□□ -0.64
ERCC3-208ENST00000491292 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.04□□□□□ -0.64
ERCC3-208ENST00000491292 MAP3K12Q12852 859 aa11.04□□□□□ -0.64
ERCC3-208ENST00000491292 MORC3Q14149 939 aa11.04□□□□□ -0.64
ERCC3-208ENST00000491292 KRT31Q15323 416 aa11.04□□□□□ -0.64
ERCC3-208ENST00000491292 PIK3AP1Q6ZUJ8 805 aa11.04□□□□□ -0.64
ERCC3-208ENST00000491292 PLBD2Q8NHP8 589 aa11.04□□□□□ -0.64
ERCC3-208ENST00000491292 NAA15Q9BXJ9 866 aaKnown RBP11.04□□□□□ -0.64
ERCC3-208ENST00000491292 HECW2Q9P2P5 1572 aa11.04□□□□□ -0.64
ERCC3-208ENST00000491292 CDC42BPGQ6DT37 1551 aa11.04□□□□□ -0.64
ERCC3-208ENST00000491292 A0A087WUV0 522 aaPredicted RBP11.04□□□□□ -0.64
ERCC3-208ENST00000491292 ECM2O94769 699 aaPredicted RBP11.04□□□□□ -0.64
ERCC3-208ENST00000491292 ATP1A1P05023 1023 aaKnown RBP11.04□□□□□ -0.64
ERCC3-208ENST00000491292 COPB1P53618 953 aaKnown RBP11.04□□□□□ -0.64
ERCC3-208ENST00000491292 CACNA2D4Q7Z3S7 1137 aa11.04□□□□□ -0.64
ERCC3-208ENST00000491292 EFCAB13Q8IY85 973 aa11.04□□□□□ -0.64
ERCC3-208ENST00000491292 ZHX3Q9H4I2 956 aa11.04□□□□□ -0.64
ERCC3-208ENST00000491292 PPANQ9NQ55 473 aaKnown RBP11.04□□□□□ -0.64
ERCC3-208ENST00000491292 FAM53CQ9NYF3 392 aa11.04□□□□□ -0.64
ERCC3-208ENST00000491292 UBA7P41226 1012 aa11.03□□□□□ -0.64
ERCC3-208ENST00000491292 SYNE4Q8N205 404 aa11.03□□□□□ -0.64
ERCC3-208ENST00000491292 IQUBQ8NA54 791 aa11.03□□□□□ -0.64
ERCC3-208ENST00000491292 OR8K1Q8NGG5 319 aa11.03□□□□□ -0.64
ERCC3-208ENST00000491292 PANX2Q96RD6 677 aa11.03□□□□□ -0.64
ERCC3-208ENST00000491292 KAT14Q9H8E8 782 aa11.03□□□□□ -0.64
ERCC3-208ENST00000491292 SMARCAL1Q9NZC9 954 aa11.03□□□□□ -0.64
ERCC3-208ENST00000491292 ZSWIM5Q9P217 1185 aa11.03□□□□□ -0.64
ERCC3-208ENST00000491292 IFT172Q9UG01 1749 aa11.03□□□□□ -0.64
ERCC3-208ENST00000491292 PRKAB2O43741 272 aa11.03□□□□□ -0.64
ERCC3-208ENST00000491292 KRT83P78385 493 aa11.03□□□□□ -0.64
ERCC3-208ENST00000491292 SPAG1Q07617 926 aa11.03□□□□□ -0.64
ERCC3-208ENST00000491292 CFAP58Q5T655 872 aa11.03□□□□□ -0.64
ERCC3-208ENST00000491292 CCDC114Q96M63 670 aa11.03□□□□□ -0.64
ERCC3-208ENST00000491292 TRMT112Q9UI30 125 aaKnown RBP11.03□□□□□ -0.64
ERCC3-208ENST00000491292 GDAQ9Y2T3 454 aa11.03□□□□□ -0.64
ERCC3-208ENST00000491292 ARAP3Q8WWN8 1544 aa11.03□□□□□ -0.64
ERCC3-208ENST00000491292 TRIM49BA6NDI0 452 aa11.03□□□□□ -0.64
ERCC3-208ENST00000491292 OPA1O60313 960 aa11.03□□□□□ -0.64
ERCC3-208ENST00000491292 TYW1BQ6NUM6 668 aa11.03□□□□□ -0.64
ERCC3-208ENST00000491292 SMCR8Q8TEV9 937 aaPredicted RBP11.03□□□□□ -0.64
ERCC3-208ENST00000491292 SELENOOQ9BVL4 669 aa11.03□□□□□ -0.64
ERCC3-208ENST00000491292 BAZ2BQ9UIF8 2168 aaKnown RBP11.03□□□□□ -0.64
ERCC3-208ENST00000491292 RAD21O60216 631 aa11.02□□□□□ -0.64
ERCC3-208ENST00000491292 TACC1O75410 805 aa11.02□□□□□ -0.64
ERCC3-208ENST00000491292 MMS22LQ6ZRQ5 1243 aa11.02□□□□□ -0.64
ERCC3-208ENST00000491292 TAX1BP1Q86VP1 789 aa11.02□□□□□ -0.64
ERCC3-208ENST00000491292 SH2D3CQ8N5H7 860 aa11.02□□□□□ -0.64
ERCC3-208ENST00000491292 DDX17Q92841 729 aaKnown RBP11.02□□□□□ -0.64
ERCC3-208ENST00000491292 FAM212AQ96EL1 285 aa11.02□□□□□ -0.64
ERCC3-208ENST00000491292 PLCD4Q9BRC7 762 aa11.02□□□□□ -0.64
ERCC3-208ENST00000491292 ADGRL3Q9HAR2 1447 aa11.02□□□□□ -0.64
ERCC3-208ENST00000491292 SH2B2O14492 632 aaPredicted RBP11.02□□□□□ -0.65
ERCC3-208ENST00000491292 NDUFA10O95299 355 aa11.02□□□□□ -0.65
ERCC3-208ENST00000491292 KRT2P35908 639 aa11.02□□□□□ -0.65
ERCC3-208ENST00000491292 RFX5P48382 616 aaPredicted RBP11.02□□□□□ -0.65
ERCC3-208ENST00000491292 NR1I3Q14994 352 aa11.02□□□□□ -0.65
ERCC3-208ENST00000491292 ARHGEF25Q86VW2 580 aa11.02□□□□□ -0.65
ERCC3-208ENST00000491292 HSD3B7Q9H2F3 369 aa11.02□□□□□ -0.65
ERCC3-208ENST00000491292 FAM207AQ9NSI2 230 aaPredicted RBP11.02□□□□□ -0.65
ERCC3-208ENST00000491292 UBN2Q6ZU65 1347 aa11.02□□□□□ -0.65
ERCC3-208ENST00000491292 NEURL4Q96JN8 1562 aa11.02□□□□□ -0.65
ERCC3-208ENST00000491292 BUB1O43683 1085 aa11.02□□□□□ -0.65
ERCC3-208ENST00000491292 CATIPQ7Z7H3 387 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms