RNA–Protein interactions for RNA: ENST00000491075.1

CLIP2-208, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-208ENST00000491075 USP17L19D6RCP7 530 aa25.24■■□□□ 1.63
CLIP2-208ENST00000491075 USP17L20D6RJB6 530 aa25.24■■□□□ 1.63
CLIP2-208ENST00000491075 ZAP70P43403 619 aa25.24■■□□□ 1.63
CLIP2-208ENST00000491075 USP17L24Q0WX57 530 aa25.24■■□□□ 1.63
CLIP2-208ENST00000491075 CLUAP1Q96AJ1 413 aa25.24■■□□□ 1.63
CLIP2-208ENST00000491075 PIH1D3Q9NQM4 214 aaKnown RBP25.24■■□□□ 1.63
CLIP2-208ENST00000491075 UNC80Q8N2C7 3258 aa25.24■■□□□ 1.63
CLIP2-208ENST00000491075 CYP7A1P22680 504 aa25.23■■□□□ 1.63
CLIP2-208ENST00000491075 USP14P54578 494 aa25.23■■□□□ 1.63
CLIP2-208ENST00000491075 DYNLL1P63167 89 aaKnown RBP25.23■■□□□ 1.63
CLIP2-208ENST00000491075 TATDN1Q6P1N9 297 aa25.23■■□□□ 1.63
CLIP2-208ENST00000491075 SSH3Q8TE77 659 aa25.23■■□□□ 1.63
CLIP2-208ENST00000491075 EHD4Q9H223 541 aa25.23■■□□□ 1.63
CLIP2-208ENST00000491075 ZYXQ15942 572 aaKnown RBP25.22■■□□□ 1.63
CLIP2-208ENST00000491075 MFSD14CQ5VZR4 134 aa25.22■■□□□ 1.63
CLIP2-208ENST00000491075 EDC3Q96F86 508 aaKnown RBP25.22■■□□□ 1.63
CLIP2-208ENST00000491075 SLC15A5A6NIM6 579 aa25.21■■□□□ 1.63
CLIP2-208ENST00000491075 CNMDO75829 334 aa25.21■■□□□ 1.63
CLIP2-208ENST00000491075 USP5P45974 858 aa25.21■■□□□ 1.63
CLIP2-208ENST00000491075 KIAA1683Q9H0B3 1180 aa25.21■■□□□ 1.63
CLIP2-208ENST00000491075 SERPINB13Q9UIV8 391 aa25.21■■□□□ 1.63
CLIP2-208ENST00000491075 MSCO60682 206 aa25.2■■□□□ 1.62
CLIP2-208ENST00000491075 SURF6O75683 361 aaKnown RBP25.2■■□□□ 1.62
CLIP2-208ENST00000491075 BCAR3O75815 825 aa25.2■■□□□ 1.62
CLIP2-208ENST00000491075 IDH1O75874 414 aaKnown RBP25.2■■□□□ 1.62
CLIP2-208ENST00000491075 MDM2Q00987 491 aaPredicted RBP25.2■■□□□ 1.62
CLIP2-208ENST00000491075 LBX2Q6XYB7 198 aa25.2■■□□□ 1.62
CLIP2-208ENST00000491075 CATSPERGQ6ZRH7 1159 aa25.2■■□□□ 1.62
CLIP2-208ENST00000491075 TMEM57Q8N5G2 664 aa25.2■■□□□ 1.62
CLIP2-208ENST00000491075 DBNLQ9UJU6 430 aaKnown RBP25.2■■□□□ 1.62
CLIP2-208ENST00000491075 IVNS1ABPQ9Y6Y0 642 aa25.2■■□□□ 1.62
CLIP2-208ENST00000491075 ZNF236Q9UL36 1845 aa25.2■■□□□ 1.62
CLIP2-208ENST00000491075 NAV1Q8NEY1 1877 aa25.19■■□□□ 1.62
CLIP2-208ENST00000491075 VCAM1P19320 739 aa25.19■■□□□ 1.62
CLIP2-208ENST00000491075 PTPREP23469 700 aa25.19■■□□□ 1.62
CLIP2-208ENST00000491075 ATP8B2P98198 1209 aa25.19■■□□□ 1.62
CLIP2-208ENST00000491075 RAB3GAP1Q15042 981 aa25.19■■□□□ 1.62
CLIP2-208ENST00000491075 WDR78Q5VTH9 848 aa25.19■■□□□ 1.62
CLIP2-208ENST00000491075 MIGA1Q8NAN2 632 aa25.19■■□□□ 1.62
CLIP2-208ENST00000491075 HOXC6P09630 235 aa25.18■■□□□ 1.62
CLIP2-208ENST00000491075 TMED8Q6PL24 325 aaPredicted RBP25.18■■□□□ 1.62
CLIP2-208ENST00000491075 TTC6Q86TZ1 520 aa25.18■■□□□ 1.62
CLIP2-208ENST00000491075 FLRT1Q9NZU1 646 aa25.18■■□□□ 1.62
CLIP2-208ENST00000491075 DDX20Q9UHI6 824 aaKnown RBP25.18■■□□□ 1.62
CLIP2-208ENST00000491075 LTBP2Q14767 1821 aa25.18■■□□□ 1.62
CLIP2-208ENST00000491075 GRB14Q14449 540 aa25.17■■□□□ 1.62
CLIP2-208ENST00000491075 ABCB5Q2M3G0 1257 aa25.17■■□□□ 1.62
CLIP2-208ENST00000491075 CERKLQ49MI3 558 aaPredicted RBP25.17■■□□□ 1.62
CLIP2-208ENST00000491075 MAGEB6Q8N7X4 407 aa25.17■■□□□ 1.62
CLIP2-208ENST00000491075 LPAR1Q92633 364 aa25.17■■□□□ 1.62
CLIP2-208ENST00000491075 LBHD1Q9BQE6 289 aaPredicted RBP25.17■■□□□ 1.62
CLIP2-208ENST00000491075 SENP6Q9GZR1 1112 aaPredicted RBP25.17■■□□□ 1.62
CLIP2-208ENST00000491075 TLR7Q9NYK1 1049 aaKnown RBP25.17■■□□□ 1.62
CLIP2-208ENST00000491075 NOP58Q9Y2X3 529 aaKnown RBP25.17■■□□□ 1.62
CLIP2-208ENST00000491075 NDUFB9Q9Y6M9 179 aa25.17■■□□□ 1.62
CLIP2-208ENST00000491075 ATP2B2Q01814 1243 aa25.16■■□□□ 1.62
CLIP2-208ENST00000491075 ZKSCAN2Q63HK3 967 aa25.16■■□□□ 1.62
CLIP2-208ENST00000491075 CABP5Q9NP86 173 aa25.16■■□□□ 1.62
CLIP2-208ENST00000491075 A0A0G2JMZ2 1700 aa25.15■■□□□ 1.62
CLIP2-208ENST00000491075 DNM1LO00429 736 aa25.15■■□□□ 1.62
CLIP2-208ENST00000491075 CNGA1P29973 690 aa25.15■■□□□ 1.62
CLIP2-208ENST00000491075 FAM109BQ6ICB4 259 aaPredicted RBP25.15■■□□□ 1.62
CLIP2-208ENST00000491075 ACER1Q8TDN7 264 aa25.15■■□□□ 1.62
CLIP2-208ENST00000491075 BTBD7Q9P203 1132 aa25.15■■□□□ 1.62
CLIP2-208ENST00000491075 RLFQ13129 1914 aa25.15■■□□□ 1.62
CLIP2-208ENST00000491075 SPDYE16A6NNV3 312 aaPredicted RBP25.14■■□□□ 1.62
CLIP2-208ENST00000491075 MAP3K12Q12852 859 aa25.14■■□□□ 1.62
CLIP2-208ENST00000491075 CCDC8Q9H0W5 538 aaPredicted RBP25.14■■□□□ 1.62
CLIP2-208ENST00000491075 RPAP3Q9H6T3 665 aaPredicted RBP25.14■■□□□ 1.62
CLIP2-208ENST00000491075 SHMT1P34896 483 aa25.13■■□□□ 1.61
CLIP2-208ENST00000491075 NPLOC4Q8TAT6 608 aa25.13■■□□□ 1.61
CLIP2-208ENST00000491075 EAF2Q96CJ1 260 aaPredicted RBP25.13■■□□□ 1.61
CLIP2-208ENST00000491075 C1orf115Q9H7X2 142 aa25.13■■□□□ 1.61
CLIP2-208ENST00000491075 PRKAG2Q9UGJ0 569 aa25.13■■□□□ 1.61
CLIP2-208ENST00000491075 MYH8P13535 1937 aa25.12■■□□□ 1.61
CLIP2-208ENST00000491075 POTEB2H3BUK9 544 aa25.12■■□□□ 1.61
CLIP2-208ENST00000491075 CYP2C19P33261 490 aa25.12■■□□□ 1.61
CLIP2-208ENST00000491075 CCER2I3L3R5 266 aa25.11■■□□□ 1.61
CLIP2-208ENST00000491075 CYBAP13498 195 aa25.11■■□□□ 1.61
CLIP2-208ENST00000491075 ATN1P54259 1190 aaPredicted RBP25.11■■□□□ 1.61
CLIP2-208ENST00000491075 IGHA2P01877 340 aa25.1■■□□□ 1.61
CLIP2-208ENST00000491075 PLCD1P51178 756 aa25.1■■□□□ 1.61
CLIP2-208ENST00000491075 RTP1P59025 263 aa25.1■■□□□ 1.61
CLIP2-208ENST00000491075 DPP9Q86TI2 863 aa25.1■■□□□ 1.61
CLIP2-208ENST00000491075 TRPV1Q8NER1 839 aa25.1■■□□□ 1.61
CLIP2-208ENST00000491075 ANTXR1Q9H6X2 564 aa25.1■■□□□ 1.61
CLIP2-208ENST00000491075 STRNO43815 780 aa25.09■■□□□ 1.61
CLIP2-208ENST00000491075 POLR3DP05423 398 aaPredicted RBP25.09■■□□□ 1.61
CLIP2-208ENST00000491075 GUCY1A2P33402 732 aa25.09■■□□□ 1.61
CLIP2-208ENST00000491075 OLFML2BQ68BL8 750 aa25.09■■□□□ 1.61
CLIP2-208ENST00000491075 FTSJ3Q8IY81 847 aaKnown RBP25.09■■□□□ 1.61
CLIP2-208ENST00000491075 ARRDC4Q8NCT1 418 aa25.09■■□□□ 1.61
CLIP2-208ENST00000491075 GUCD1Q96NT3 240 aa25.09■■□□□ 1.61
CLIP2-208ENST00000491075 RIOK1Q9BRS2 568 aaKnown RBP25.09■■□□□ 1.61
CLIP2-208ENST00000491075 ADORA2AP29274 412 aa25.08■■□□□ 1.61
CLIP2-208ENST00000491075 GABPAQ06546 454 aa25.08■■□□□ 1.61
CLIP2-208ENST00000491075 COG2Q14746 738 aa25.08■■□□□ 1.61
CLIP2-208ENST00000491075 SEPT2Q15019 361 aa25.08■■□□□ 1.61
CLIP2-208ENST00000491075 MOV10L1Q9BXT6 1211 aaKnown RBP25.08■■□□□ 1.61
CLIP2-208ENST00000491075 HOXC10Q9NYD6 342 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms