RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 COA7Q96BR5 231 aa37.72■■■■□ 3.63
LDB1-204ENST00000490751 KIAA1683Q9H0B3 1180 aa37.72■■■■□ 3.63
LDB1-204ENST00000490751 MORF4L1Q9UBU8 362 aa37.72■■■■□ 3.63
LDB1-204ENST00000490751 TAOK2Q9UL54 1235 aa37.72■■■■□ 3.63
LDB1-204ENST00000490751 SLAIN1Q8ND83 568 aa37.71■■■■□ 3.63
LDB1-204ENST00000490751 APPBP2Q92624 585 aa37.71■■■■□ 3.63
LDB1-204ENST00000490751 SMIM22K7EJ46 135 aa37.7■■■■□ 3.63
LDB1-204ENST00000490751 RNF113AO15541 343 aaKnown RBP37.7■■■■□ 3.63
LDB1-204ENST00000490751 MTFR1Q15390 333 aa37.7■■■■□ 3.63
LDB1-204ENST00000490751 STRBPQ96SI9 672 aaKnown RBP37.7■■■■□ 3.63
LDB1-204ENST00000490751 GLRX3O76003 335 aaKnown RBP37.69■■■■□ 3.62
LDB1-204ENST00000490751 ZFYP08048 801 aaPredicted RBP37.69■■■■□ 3.62
LDB1-204ENST00000490751 MX1P20591 662 aa37.69■■■■□ 3.62
LDB1-204ENST00000490751 HDAC1Q13547 482 aaPredicted RBP37.69■■■■□ 3.62
LDB1-204ENST00000490751 OSBP2Q969R2 916 aa37.69■■■■□ 3.62
LDB1-204ENST00000490751 BIN2Q9UBW5 565 aaPredicted RBP37.69■■■■□ 3.62
LDB1-204ENST00000490751 ZBTB47Q9UFB7 747 aaPredicted RBP37.69■■■■□ 3.62
LDB1-204ENST00000490751 ANKRD45Q5TZF3 282 aa37.68■■■■□ 3.62
LDB1-204ENST00000490751 ADCY3O60266 1144 aa37.67■■■■□ 3.62
LDB1-204ENST00000490751 PEX10O60683 326 aa37.67■■■■□ 3.62
LDB1-204ENST00000490751 IRF5Q13568 498 aa37.67■■■■□ 3.62
LDB1-204ENST00000490751 CTR9Q6PD62 1173 aa37.67■■■■□ 3.62
LDB1-204ENST00000490751 TMEM179Q6ZVK1 233 aa37.67■■■■□ 3.62
LDB1-204ENST00000490751 GCC1Q96CN9 775 aa37.67■■■■□ 3.62
LDB1-204ENST00000490751 TXNRD2Q9NNW7 524 aa37.67■■■■□ 3.62
LDB1-204ENST00000490751 USP17L15C9J2P7 530 aa37.66■■■■□ 3.62
LDB1-204ENST00000490751 USP17L13C9JLJ4 530 aa37.66■■■■□ 3.62
LDB1-204ENST00000490751 USP17L11C9JVI0 530 aa37.66■■■■□ 3.62
LDB1-204ENST00000490751 USP17L18D6R9N7 530 aa37.66■■■■□ 3.62
LDB1-204ENST00000490751 USP17L22D6RA61 530 aa37.66■■■■□ 3.62
LDB1-204ENST00000490751 USP17L17D6RBQ6 530 aa37.66■■■■□ 3.62
LDB1-204ENST00000490751 USP17L19D6RCP7 530 aa37.66■■■■□ 3.62
LDB1-204ENST00000490751 USP17L20D6RJB6 530 aa37.66■■■■□ 3.62
LDB1-204ENST00000490751 VCAM1P19320 739 aa37.66■■■■□ 3.62
LDB1-204ENST00000490751 USP17L24Q0WX57 530 aa37.66■■■■□ 3.62
LDB1-204ENST00000490751 SALL3Q9BXA9 1300 aa37.65■■■■□ 3.62
LDB1-204ENST00000490751 AKR1B1P15121 316 aa37.65■■■■□ 3.62
LDB1-204ENST00000490751 CDK8P49336 464 aa37.65■■■■□ 3.62
LDB1-204ENST00000490751 UBXN2AP68543 259 aa37.65■■■■□ 3.62
LDB1-204ENST00000490751 LRRFIP1Q32MZ4 808 aaKnown RBP37.65■■■■□ 3.62
LDB1-204ENST00000490751 C16orf86Q6ZW13 317 aa37.65■■■■□ 3.62
LDB1-204ENST00000490751 GPRC5AQ8NFJ5 357 aa37.65■■■■□ 3.62
LDB1-204ENST00000490751 GTF3C2Q8WUA4 911 aaPredicted RBP37.65■■■■□ 3.62
LDB1-204ENST00000490751 RBPJLQ9UBG7 517 aa37.65■■■■□ 3.62
LDB1-204ENST00000490751 ARPP21Q9UBL0 812 aaPredicted RBP37.65■■■■□ 3.62
LDB1-204ENST00000490751 ELNP15502 786 aa37.64■■■■□ 3.62
LDB1-204ENST00000490751 PXYLP1Q8TE99 480 aa37.64■■■■□ 3.62
LDB1-204ENST00000490751 A0A1W2PRG0 241 aa37.63■■■■□ 3.61
LDB1-204ENST00000490751 AAMPQ13685 434 aa37.63■■■■□ 3.61
LDB1-204ENST00000490751 PAGR1Q9BTK6 254 aa37.63■■■■□ 3.61
LDB1-204ENST00000490751 GSG1L2A8MUP6 293 aa37.62■■■■□ 3.61
LDB1-204ENST00000490751 M0R2C6 588 aa37.62■■■■□ 3.61
LDB1-204ENST00000490751 GPAA1O43292 621 aa37.62■■■■□ 3.61
LDB1-204ENST00000490751 CCL5P13501 91 aa37.62■■■■□ 3.61
LDB1-204ENST00000490751 CATSPERGQ6ZRH7 1159 aa37.62■■■■□ 3.61
LDB1-204ENST00000490751 CCDC17Q96LX7 622 aa37.62■■■■□ 3.61
LDB1-204ENST00000490751 FSD1Q9BTV5 496 aa37.62■■■■□ 3.61
LDB1-204ENST00000490751 PLXNB2O15031 1838 aa37.61■■■■□ 3.61
LDB1-204ENST00000490751 ERVK-9P63128 1117 aa37.61■■■■□ 3.61
LDB1-204ENST00000490751 ERVK-24P63145 666 aa37.61■■■■□ 3.61
LDB1-204ENST00000490751 POTEEQ6S8J3 1075 aa37.61■■■■□ 3.61
LDB1-204ENST00000490751 CLEC10AQ8IUN9 316 aa37.61■■■■□ 3.61
LDB1-204ENST00000490751 RPAP3Q9H6T3 665 aaPredicted RBP37.61■■■■□ 3.61
LDB1-204ENST00000490751 GIMAP6Q6P9H5 292 aa37.6■■■■□ 3.61
LDB1-204ENST00000490751 INHAP05111 366 aa37.59■■■■□ 3.61
LDB1-204ENST00000490751 ICA1Q05084 483 aa37.59■■■■□ 3.61
LDB1-204ENST00000490751 Q3C1V9 767 aa37.59■■■■□ 3.61
LDB1-204ENST00000490751 SBK1Q52WX2 424 aa37.59■■■■□ 3.61
LDB1-204ENST00000490751 RNF208Q9H0X6 261 aa37.59■■■■□ 3.61
LDB1-204ENST00000490751 GJD2Q9UKL4 321 aa37.59■■■■□ 3.61
LDB1-204ENST00000490751 MKI67P46013 3256 aaKnown RBP37.59■■■■□ 3.61
LDB1-204ENST00000490751 GNAT2P19087 354 aa37.58■■■■□ 3.61
LDB1-204ENST00000490751 ARHGEF10LQ9HCE6 1279 aa37.58■■■■□ 3.61
LDB1-204ENST00000490751 SEC62Q99442 399 aaKnown RBP37.57■■■■□ 3.6
LDB1-204ENST00000490751 UNC93B1Q9H1C4 597 aa37.57■■■■□ 3.6
LDB1-204ENST00000490751 EPB41L4AQ9HCS5 686 aaPredicted RBP37.57■■■■□ 3.6
LDB1-204ENST00000490751 RABGAP1Q9Y3P9 1069 aa37.57■■■■□ 3.6
LDB1-204ENST00000490751 SIAH1Q8IUQ4 282 aa37.56■■■■□ 3.6
LDB1-204ENST00000490751 SHISA4Q96DD7 197 aa37.56■■■■□ 3.6
LDB1-204ENST00000490751 PORCNQ9H237 461 aa37.56■■■■□ 3.6
LDB1-204ENST00000490751 MINDY4BA8MYZ0 360 aa37.55■■■■□ 3.6
LDB1-204ENST00000490751 CNMDO75829 334 aa37.55■■■■□ 3.6
LDB1-204ENST00000490751 GJB1P08034 283 aa37.55■■■■□ 3.6
LDB1-204ENST00000490751 MAPK4P31152 587 aa37.55■■■■□ 3.6
LDB1-204ENST00000490751 PRPF38BQ5VTL8 546 aaKnown RBP37.55■■■■□ 3.6
LDB1-204ENST00000490751 CCAR1Q8IX12 1150 aaKnown RBP37.55■■■■□ 3.6
LDB1-204ENST00000490751 STAP2Q9UGK3 403 aa37.55■■■■□ 3.6
LDB1-204ENST00000490751 APPP05067 770 aa37.54■■■■□ 3.6
LDB1-204ENST00000490751 TDO2P48775 406 aa37.54■■■■□ 3.6
LDB1-204ENST00000490751 LBX2Q6XYB7 198 aa37.54■■■■□ 3.6
LDB1-204ENST00000490751 EXOC6Q8TAG9 804 aa37.54■■■■□ 3.6
LDB1-204ENST00000490751 NKX2-3Q8TAU0 364 aa37.54■■■■□ 3.6
LDB1-204ENST00000490751 SH2D4AQ9H788 454 aa37.54■■■■□ 3.6
LDB1-204ENST00000490751 TMX2Q9Y320 296 aa37.54■■■■□ 3.6
LDB1-204ENST00000490751 ROBO3Q96MS0 1386 aa37.54■■■■□ 3.6
LDB1-204ENST00000490751 SPDYE16A6NNV3 312 aaPredicted RBP37.53■■■■□ 3.6
LDB1-204ENST00000490751 PDE1AP54750 535 aa37.53■■■■□ 3.6
LDB1-204ENST00000490751 KIAA1755Q5JYT7 1200 aa37.53■■■■□ 3.6
LDB1-204ENST00000490751 ZMYM1Q5SVZ6 1142 aa37.53■■■■□ 3.6
LDB1-204ENST00000490751 STK11IPQ8N1F8 1099 aa37.53■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms