RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 TMEM179Q6ZVK1 233 aa18.38■□□□□ 0.53
VPS26A-207ENST00000490696 ZNF589Q86UQ0 364 aaPredicted RBP18.38■□□□□ 0.53
VPS26A-207ENST00000490696 ACER1Q8TDN7 264 aa18.38■□□□□ 0.53
VPS26A-207ENST00000490696 ERO1AQ96HE7 468 aa18.38■□□□□ 0.53
VPS26A-207ENST00000490696 CCDC17Q96LX7 622 aa18.38■□□□□ 0.53
VPS26A-207ENST00000490696 MYH8P13535 1937 aa18.37■□□□□ 0.53
VPS26A-207ENST00000490696 CCDC85CA6NKD9 419 aa18.37■□□□□ 0.53
VPS26A-207ENST00000490696 CENPQQ7L2Z9 268 aaPredicted RBP18.37■□□□□ 0.53
VPS26A-207ENST00000490696 CD99L2Q8TCZ2 262 aa18.37■□□□□ 0.53
VPS26A-207ENST00000490696 KIAA1683Q9H0B3 1180 aa18.37■□□□□ 0.53
VPS26A-207ENST00000490696 NAPBQ9H115 298 aa18.37■□□□□ 0.53
VPS26A-207ENST00000490696 EMILIN3Q9NT22 766 aa18.37■□□□□ 0.53
VPS26A-207ENST00000490696 TMOD4Q9NZQ9 345 aa18.37■□□□□ 0.53
VPS26A-207ENST00000490696 CPA4Q9UI42 421 aa18.37■□□□□ 0.53
VPS26A-207ENST00000490696 BCRP11274 1271 aa18.36■□□□□ 0.53
VPS26A-207ENST00000490696 ALX1Q15699 326 aa18.36■□□□□ 0.53
VPS26A-207ENST00000490696 USP17L2Q6R6M4 530 aa18.36■□□□□ 0.53
VPS26A-207ENST00000490696 C12orf42Q96LP6 360 aa18.36■□□□□ 0.53
VPS26A-207ENST00000490696 CCDC171Q6TFL3 1326 aa18.35■□□□□ 0.53
VPS26A-207ENST00000490696 A0A1W2PRG0 241 aa18.35■□□□□ 0.53
VPS26A-207ENST00000490696 HIP1O00291 1037 aa18.35■□□□□ 0.53
VPS26A-207ENST00000490696 RASA1P20936 1047 aa18.35■□□□□ 0.53
VPS26A-207ENST00000490696 HOXA7P31268 230 aaPredicted RBP18.35■□□□□ 0.53
VPS26A-207ENST00000490696 HOXD11P31277 338 aaPredicted RBP18.35■□□□□ 0.53
VPS26A-207ENST00000490696 PPARAQ07869 468 aa18.35■□□□□ 0.53
VPS26A-207ENST00000490696 PABPC4Q13310 644 aaKnown RBP eCLIP18.35■□□□□ 0.53
VPS26A-207ENST00000490696 PKN2Q16513 984 aaKnown RBP18.35■□□□□ 0.53
VPS26A-207ENST00000490696 SIAH1Q8IUQ4 282 aa18.35■□□□□ 0.53
VPS26A-207ENST00000490696 STK11IPQ8N1F8 1099 aa18.35■□□□□ 0.53
VPS26A-207ENST00000490696 FEZ1Q99689 392 aa18.35■□□□□ 0.53
VPS26A-207ENST00000490696 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.35■□□□□ 0.53
VPS26A-207ENST00000490696 ASCC2Q9H1I8 757 aaPredicted RBP18.35■□□□□ 0.53
VPS26A-207ENST00000490696 PNMA3Q9UL41 463 aa18.35■□□□□ 0.53
VPS26A-207ENST00000490696 PDE4DIPQ5VU43 2346 aa18.35■□□□□ 0.53
VPS26A-207ENST00000490696 HSPD1P10809 573 aaKnown RBP18.34■□□□□ 0.53
VPS26A-207ENST00000490696 USP14P54578 494 aa18.34■□□□□ 0.53
VPS26A-207ENST00000490696 LACTBP83111 547 aaPredicted RBP18.34■□□□□ 0.53
VPS26A-207ENST00000490696 CWC27Q6UX04 472 aaKnown RBP18.34■□□□□ 0.53
VPS26A-207ENST00000490696 OTOP1Q7RTM1 612 aa18.34■□□□□ 0.53
VPS26A-207ENST00000490696 CLEC10AQ8IUN9 316 aa18.34■□□□□ 0.53
VPS26A-207ENST00000490696 SMCR8Q8TEV9 937 aaPredicted RBP18.34■□□□□ 0.53
VPS26A-207ENST00000490696 MKNK2Q9HBH9 465 aa18.34■□□□□ 0.53
VPS26A-207ENST00000490696 DIAPH3Q9NSV4 1193 aa18.34■□□□□ 0.53
VPS26A-207ENST00000490696 TRIM17Q9Y577 477 aa18.34■□□□□ 0.53
VPS26A-207ENST00000490696 OSBPP22059 807 aa18.33■□□□□ 0.52
VPS26A-207ENST00000490696 ICA1Q05084 483 aa18.33■□□□□ 0.52
VPS26A-207ENST00000490696 ZYXQ15942 572 aaKnown RBP18.33■□□□□ 0.52
VPS26A-207ENST00000490696 ARHGAP39Q9C0H5 1083 aa18.33■□□□□ 0.52
VPS26A-207ENST00000490696 EFCC1Q9HA90 598 aa18.33■□□□□ 0.52
VPS26A-207ENST00000490696 GREB1LQ9C091 1923 aaPredicted RBP18.33■□□□□ 0.52
VPS26A-207ENST00000490696 ZMYM6O95789 1325 aa18.32■□□□□ 0.52
VPS26A-207ENST00000490696 PRDM1O75626 825 aa18.32■□□□□ 0.52
VPS26A-207ENST00000490696 FGAP02671 866 aa18.32■□□□□ 0.52
VPS26A-207ENST00000490696 MFAP1P55081 439 aaKnown RBP18.32■□□□□ 0.52
VPS26A-207ENST00000490696 KANSL2Q9H9L4 492 aa18.32■□□□□ 0.52
VPS26A-207ENST00000490696 ZNF287Q9HBT7 754 aa18.32■□□□□ 0.52
VPS26A-207ENST00000490696 ANAPC4Q9UJX5 808 aa18.32■□□□□ 0.52
VPS26A-207ENST00000490696 NEFLP07196 543 aa18.31■□□□□ 0.52
VPS26A-207ENST00000490696 CENPBP07199 599 aaPredicted RBP18.31■□□□□ 0.52
VPS26A-207ENST00000490696 SLC3A2P08195 630 aaKnown RBP18.31■□□□□ 0.52
VPS26A-207ENST00000490696 VCAM1P19320 739 aa18.31■□□□□ 0.52
VPS26A-207ENST00000490696 CTGFP29279 349 aa18.31■□□□□ 0.52
VPS26A-207ENST00000490696 GCLCP48506 637 aaPredicted RBP18.31■□□□□ 0.52
VPS26A-207ENST00000490696 IRX3P78415 501 aaPredicted RBP18.31■□□□□ 0.52
VPS26A-207ENST00000490696 PDE4BQ07343 736 aa18.31■□□□□ 0.52
VPS26A-207ENST00000490696 FBXO46Q6PJ61 603 aaPredicted RBP18.31■□□□□ 0.52
VPS26A-207ENST00000490696 P2RX7Q99572 595 aaKnown RBP18.31■□□□□ 0.52
VPS26A-207ENST00000490696 ARHGEF10LQ9HCE6 1279 aa18.31■□□□□ 0.52
VPS26A-207ENST00000490696 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.31■□□□□ 0.52
VPS26A-207ENST00000490696 TMX2Q9Y320 296 aa18.31■□□□□ 0.52
VPS26A-207ENST00000490696 HTTP42858 3142 aa18.31■□□□□ 0.52
VPS26A-207ENST00000490696 ZSWIM8A7E2V4 1837 aa18.3■□□□□ 0.52
VPS26A-207ENST00000490696 IGKV6D-41A0A0C4DH26 115 aa18.3■□□□□ 0.52
VPS26A-207ENST00000490696 EEF2P13639 858 aaKnown RBP18.3■□□□□ 0.52
VPS26A-207ENST00000490696 CTDSPL2Q05D32 466 aa18.3■□□□□ 0.52
VPS26A-207ENST00000490696 KIF22Q14807 665 aa18.3■□□□□ 0.52
VPS26A-207ENST00000490696 ARHGEF6Q15052 776 aa18.3■□□□□ 0.52
VPS26A-207ENST00000490696 KIAA1755Q5JYT7 1200 aa18.3■□□□□ 0.52
VPS26A-207ENST00000490696 SKAP1Q86WV1 359 aa18.3■□□□□ 0.52
VPS26A-207ENST00000490696 ZNF444Q8N0Y2 327 aaPredicted RBP18.3■□□□□ 0.52
VPS26A-207ENST00000490696 ANKRD13CQ8N6S4 541 aa18.3■□□□□ 0.52
VPS26A-207ENST00000490696 CCDC136Q96JN2 1154 aa18.3■□□□□ 0.52
VPS26A-207ENST00000490696 IL25Q9H293 177 aa18.3■□□□□ 0.52
VPS26A-207ENST00000490696 TACC3Q9Y6A5 838 aa18.3■□□□□ 0.52
VPS26A-207ENST00000490696 USP17L15C9J2P7 530 aa18.29■□□□□ 0.52
VPS26A-207ENST00000490696 USP17L13C9JLJ4 530 aa18.29■□□□□ 0.52
VPS26A-207ENST00000490696 USP17L11C9JVI0 530 aa18.29■□□□□ 0.52
VPS26A-207ENST00000490696 USP17L18D6R9N7 530 aa18.29■□□□□ 0.52
VPS26A-207ENST00000490696 USP17L22D6RA61 530 aa18.29■□□□□ 0.52
VPS26A-207ENST00000490696 USP17L17D6RBQ6 530 aa18.29■□□□□ 0.52
VPS26A-207ENST00000490696 USP17L19D6RCP7 530 aa18.29■□□□□ 0.52
VPS26A-207ENST00000490696 USP17L20D6RJB6 530 aa18.29■□□□□ 0.52
VPS26A-207ENST00000490696 PSMC4P43686 418 aa18.29■□□□□ 0.52
VPS26A-207ENST00000490696 USP17L24Q0WX57 530 aa18.29■□□□□ 0.52
VPS26A-207ENST00000490696 FAM110CQ1W6H9 321 aa18.29■□□□□ 0.52
VPS26A-207ENST00000490696 CATSPERGQ6ZRH7 1159 aa18.29■□□□□ 0.52
VPS26A-207ENST00000490696 TRIM47Q96LD4 638 aa18.29■□□□□ 0.52
VPS26A-207ENST00000490696 SH2D4AQ9H788 454 aa18.29■□□□□ 0.52
VPS26A-207ENST00000490696 VCPKMTQ9H867 229 aa18.29■□□□□ 0.52
VPS26A-207ENST00000490696 INCENPQ9NQS7 918 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms