RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 INHBEP58166 350 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 RHBDL3P58872 404 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 FUT2Q10981 343 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 MVPQ14764 893 aaKnown RBP9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 CCL15Q16663 113 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 GORABQ5T7V8 394 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 C20orf194Q5TEA3 1177 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 CEP85Q6P2H3 762 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 SIRT2Q8IXJ6 389 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 FTSJ3Q8IY81 847 aaKnown RBP9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 SPATA5Q8NB90 893 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 RDH13Q8NBN7 331 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 NSUN4Q96CB9 384 aaKnown RBP9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 ZNF333Q96JL9 665 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 ZNF341Q9BYN7 854 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 ZNF112Q9UJU3 913 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 EXOC6BQ9Y2D4 811 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 COG6Q9Y2V7 657 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 NOP58Q9Y2X3 529 aaKnown RBP9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 LAMA3Q16787 3333 aa9.01□□□□□ -0.97
PRPF4B-208ENST00000490653 MYO5AQ9Y4I1 1855 aaKnown RBP9□□□□□ -0.97
PRPF4B-208ENST00000490653 GPR75-ASB3A0A0A6YYF3 556 aa9□□□□□ -0.97
PRPF4B-208ENST00000490653 SPDYE5A6NIY4 337 aa9□□□□□ -0.97
PRPF4B-208ENST00000490653 FAM196BA6NMK8 535 aa9□□□□□ -0.97
PRPF4B-208ENST00000490653 PHF20L1A8MW92 1017 aa9□□□□□ -0.97
PRPF4B-208ENST00000490653 CD2BP2O95400 341 aaKnown RBP9□□□□□ -0.97
PRPF4B-208ENST00000490653 CYP2E1P05181 493 aaPredicted RBP9□□□□□ -0.97
PRPF4B-208ENST00000490653 FECHP22830 423 aa9□□□□□ -0.97
PRPF4B-208ENST00000490653 ZAP70P43403 619 aa9□□□□□ -0.97
PRPF4B-208ENST00000490653 OS9Q13438 667 aaPredicted RBP9□□□□□ -0.97
PRPF4B-208ENST00000490653 PICALMQ13492 652 aa9□□□□□ -0.97
PRPF4B-208ENST00000490653 RRP1BQ14684 758 aaKnown RBP9□□□□□ -0.97
PRPF4B-208ENST00000490653 CCDC84Q86UT8 332 aaPredicted RBP9□□□□□ -0.97
PRPF4B-208ENST00000490653 DZIP1Q86YF9 867 aaKnown RBP9□□□□□ -0.97
PRPF4B-208ENST00000490653 FAM160A2Q8N612 972 aaPredicted RBP9□□□□□ -0.97
PRPF4B-208ENST00000490653 IDI2Q9BXS1 227 aa9□□□□□ -0.97
PRPF4B-208ENST00000490653 ARHGAP39Q9C0H5 1083 aa9□□□□□ -0.97
PRPF4B-208ENST00000490653 GPR108Q9NPR9 543 aa9□□□□□ -0.97
PRPF4B-208ENST00000490653 PIH1D3Q9NQM4 214 aaKnown RBP9□□□□□ -0.97
PRPF4B-208ENST00000490653 RAI14Q9P0K7 980 aa9□□□□□ -0.97
PRPF4B-208ENST00000490653 DBNLQ9UJU6 430 aaKnown RBP9□□□□□ -0.97
PRPF4B-208ENST00000490653 CSADQ9Y600 493 aa9□□□□□ -0.97
PRPF4B-208ENST00000490653 ZSWIM8A7E2V4 1837 aa8.99□□□□□ -0.97
PRPF4B-208ENST00000490653 BTBD19C9JJ37 291 aa8.99□□□□□ -0.97
PRPF4B-208ENST00000490653 FMNL1O95466 1100 aaPredicted RBP8.99□□□□□ -0.97
PRPF4B-208ENST00000490653 MOGSQ13724 837 aa8.99□□□□□ -0.97
PRPF4B-208ENST00000490653 TTC39AQ5SRH9 613 aa8.99□□□□□ -0.97
PRPF4B-208ENST00000490653 ADGRA1Q86SQ6 560 aa8.99□□□□□ -0.97
PRPF4B-208ENST00000490653 ERO1BQ86YB8 467 aa8.99□□□□□ -0.97
PRPF4B-208ENST00000490653 ZGPATQ8N5A5 531 aaKnown RBP8.99□□□□□ -0.97
PRPF4B-208ENST00000490653 SH3RF3Q8TEJ3 882 aaPredicted RBP8.99□□□□□ -0.97
PRPF4B-208ENST00000490653 SHISA4Q96DD7 197 aa8.99□□□□□ -0.97
PRPF4B-208ENST00000490653 BCL11AQ9H165 835 aa8.99□□□□□ -0.97
PRPF4B-208ENST00000490653 ANTXR1Q9H6X2 564 aa8.99□□□□□ -0.97
PRPF4B-208ENST00000490653 IL1RAPL2Q9NP60 686 aa8.99□□□□□ -0.97
PRPF4B-208ENST00000490653 DACH1Q9UI36 760 aa8.99□□□□□ -0.97
PRPF4B-208ENST00000490653 SLC27A5Q9Y2P5 690 aa8.99□□□□□ -0.97
PRPF4B-208ENST00000490653 PTCH2Q9Y6C5 1203 aa8.99□□□□□ -0.97
PRPF4B-208ENST00000490653 MROH7-TTC4A0A0A0MT08 1334 aa8.99□□□□□ -0.97
PRPF4B-208ENST00000490653 RBBP6Q7Z6E9 1792 aaKnown RBP8.99□□□□□ -0.97
PRPF4B-208ENST00000490653 ATRNL1Q5VV63 1379 aa8.99□□□□□ -0.97
PRPF4B-208ENST00000490653 DDX11L8A8MPP1 907 aa8.98□□□□□ -0.97
PRPF4B-208ENST00000490653 APBB1O00213 710 aa8.98□□□□□ -0.97
PRPF4B-208ENST00000490653 ENTPD3O75355 529 aa8.98□□□□□ -0.97
PRPF4B-208ENST00000490653 ALDH1A1P00352 501 aa8.98□□□□□ -0.97
PRPF4B-208ENST00000490653 UQCRFS1P1P0C7P4 283 aa8.98□□□□□ -0.97
PRPF4B-208ENST00000490653 GCGRP47871 477 aa8.98□□□□□ -0.97
PRPF4B-208ENST00000490653 GTF2A2P52657 109 aa8.98□□□□□ -0.97
PRPF4B-208ENST00000490653 DYNLL1P63167 89 aaKnown RBP8.98□□□□□ -0.97
PRPF4B-208ENST00000490653 MAP3K10Q02779 954 aa8.98□□□□□ -0.97
PRPF4B-208ENST00000490653 TAF1CQ15572 869 aaPredicted RBP8.98□□□□□ -0.97
PRPF4B-208ENST00000490653 DCAF15Q66K64 600 aa8.98□□□□□ -0.97
PRPF4B-208ENST00000490653 SPTY2D1Q68D10 685 aaPredicted RBP8.98□□□□□ -0.97
PRPF4B-208ENST00000490653 ZSCAN29Q8IWY8 852 aaPredicted RBP8.98□□□□□ -0.97
PRPF4B-208ENST00000490653 CYP4X1Q8N118 509 aa8.98□□□□□ -0.97
PRPF4B-208ENST00000490653 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.98□□□□□ -0.97
PRPF4B-208ENST00000490653 LRP2BPQ9P2M1 347 aa8.98□□□□□ -0.97
PRPF4B-208ENST00000490653 RCAN3Q9UKA8 241 aa8.98□□□□□ -0.97
PRPF4B-208ENST00000490653 KIAA0100Q14667 2235 aaKnown RBP8.98□□□□□ -0.97
PRPF4B-208ENST00000490653 PDS5AQ29RF7 1337 aaKnown RBP8.98□□□□□ -0.97
PRPF4B-208ENST00000490653 RFX7Q2KHR2 1363 aa8.98□□□□□ -0.97
PRPF4B-208ENST00000490653 H0YGN5 161 aa8.97□□□□□ -0.97
PRPF4B-208ENST00000490653 SMCPP49901 116 aaPredicted RBP8.97□□□□□ -0.97
PRPF4B-208ENST00000490653 JAG1P78504 1218 aa8.97□□□□□ -0.97
PRPF4B-208ENST00000490653 SP3Q02447 781 aa8.97□□□□□ -0.97
PRPF4B-208ENST00000490653 PPATQ06203 517 aa8.97□□□□□ -0.97
PRPF4B-208ENST00000490653 PPIL2Q13356 520 aa8.97□□□□□ -0.97
PRPF4B-208ENST00000490653 SHROOM1Q2M3G4 852 aaPredicted RBP8.97□□□□□ -0.97
PRPF4B-208ENST00000490653 CTC1Q2NKJ3 1217 aa8.97□□□□□ -0.97
PRPF4B-208ENST00000490653 CCDC158Q5M9N0 1113 aa8.97□□□□□ -0.97
PRPF4B-208ENST00000490653 GPAT2Q6NUI2 795 aa8.97□□□□□ -0.97
PRPF4B-208ENST00000490653 BRICD5Q6PL45 260 aa8.97□□□□□ -0.97
PRPF4B-208ENST00000490653 UBE2Q1Q7Z7E8 422 aa8.97□□□□□ -0.97
PRPF4B-208ENST00000490653 PRO3102Q9H379 93 aa8.97□□□□□ -0.97
PRPF4B-208ENST00000490653 EFCC1Q9HA90 598 aa8.97□□□□□ -0.97
PRPF4B-208ENST00000490653 ZBTB40Q9NUA8 1239 aa8.97□□□□□ -0.97
PRPF4B-208ENST00000490653 AATFQ9NY61 560 aaKnown RBP eCLIP8.97□□□□□ -0.97
PRPF4B-208ENST00000490653 RPAP1Q9BWH6 1393 aaPredicted RBP8.97□□□□□ -0.97
PRPF4B-208ENST00000490653 COL6A3P12111 3177 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 3168.5 ms