RNA–Protein interactions for RNA: ENST00000490444.2

PUM3-204, Transcript of pumilio RNA binding family member 3, human

TSL 5

Gene PUM3, Length 340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM3-204	ENST00000490444	ZNF605	Q86T29	641 aa		4.22	□□□□□ -1.73
PUM3-204	ENST00000490444	RNF214	Q8ND24	703 aa		4.22	□□□□□ -1.73
PUM3-204	ENST00000490444	KCNB2	Q92953	911 aa		4.22	□□□□□ -1.73
PUM3-204	ENST00000490444	BDH2	Q9BUT1	245 aa		4.22	□□□□□ -1.73
PUM3-204	ENST00000490444	OSBPL7	Q9BZF2	842 aa		4.22	□□□□□ -1.73
PUM3-204	ENST00000490444	ZNF552	Q9H707	407 aa	Predicted RBP	4.22	□□□□□ -1.73
PUM3-204	ENST00000490444	LUC7L	Q9NQ29	371 aa	Known RBP	4.22	□□□□□ -1.73
PUM3-204	ENST00000490444	PRDM5	Q9NQX1	630 aa	Predicted RBP	4.22	□□□□□ -1.73
PUM3-204	ENST00000490444	TMEM39A	Q9NV64	488 aa		4.22	□□□□□ -1.73
PUM3-204	ENST00000490444	GPN3	Q9UHW5	284 aa	Predicted RBP	4.22	□□□□□ -1.73
PUM3-204	ENST00000490444	ALG1L	Q6GMV1	187 aa		4.21	□□□□□ -1.74
PUM3-204	ENST00000490444	LILRA2	Q8N149	483 aa		4.21	□□□□□ -1.74
PUM3-204	ENST00000490444	SIGLEC10	Q96LC7	697 aa		4.21	□□□□□ -1.74
PUM3-204	ENST00000490444	ADAM7	Q9H2U9	754 aa		4.21	□□□□□ -1.74
PUM3-204	ENST00000490444	DNAJC25-GNG10	A0A024R161	153 aa		4.2	□□□□□ -1.74
PUM3-204	ENST00000490444	RBM47	A0AV96	593 aa	Known RBP	4.2	□□□□□ -1.74
PUM3-204	ENST00000490444	FAM155A	B1AL88	458 aa	Predicted RBP	4.2	□□□□□ -1.74
PUM3-204	ENST00000490444	MATN3	O15232	486 aa		4.2	□□□□□ -1.74
PUM3-204	ENST00000490444	GRIN3B	O60391	1043 aa		4.2	□□□□□ -1.74
PUM3-204	ENST00000490444	ZNF16	P17020	682 aa	Predicted RBP	4.2	□□□□□ -1.74
PUM3-204	ENST00000490444	PI3	P19957	117 aa		4.2	□□□□□ -1.74
PUM3-204	ENST00000490444	FCGRT	P55899	365 aa		4.2	□□□□□ -1.74
PUM3-204	ENST00000490444	ERVK-24	P63145	666 aa		4.2	□□□□□ -1.74
PUM3-204	ENST00000490444	RALGPS1	Q5JS13	557 aa		4.2	□□□□□ -1.74
PUM3-204	ENST00000490444	C3orf58	Q8NDZ4	430 aa		4.2	□□□□□ -1.74
PUM3-204	ENST00000490444	DUSP9	Q99956	384 aa	Known RBP	4.2	□□□□□ -1.74
PUM3-204	ENST00000490444	BCO2	Q9BYV7	579 aa		4.2	□□□□□ -1.74
PUM3-204	ENST00000490444	SLITRK6	Q9H5Y7	841 aa		4.2	□□□□□ -1.74
PUM3-204	ENST00000490444	SP110	Q9HB58	689 aa		4.2	□□□□□ -1.74
PUM3-204	ENST00000490444	NLRP2	Q9NX02	1062 aa		4.2	□□□□□ -1.74
PUM3-204	ENST00000490444	CCDC9	Q9Y3X0	531 aa	Known RBP	4.2	□□□□□ -1.74
PUM3-204	ENST00000490444	ST14	Q9Y5Y6	855 aa		4.2	□□□□□ -1.74
PUM3-204	ENST00000490444		H3BS24	57 aa		4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	FSHB	P01225	129 aa		4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	XRCC5	P13010	732 aa	Known RBP	4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	GNA15	P30679	374 aa		4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	HK2	P52789	917 aa		4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	DAB2	P98082	770 aa		4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	ZNF827	Q17R98	1081 aa		4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	CDKAL1	Q5VV42	579 aa		4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	NXPE4	Q6UWF7	544 aa		4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	TMC4	Q7Z404	712 aa		4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	NPM2	Q86SE8	214 aa	Known RBP	4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	PDZD3	Q86UT5	571 aa		4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	SULF2	Q8IWU5	870 aa		4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	MFSD4A	Q8N468	514 aa		4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	PANK1	Q8TE04	598 aa		4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	GIPC2	Q8TF65	315 aa		4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	ACSBG1	Q96GR2	724 aa		4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	SGPP1	Q9BX95	441 aa		4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	BCL2L13	Q9BXK5	485 aa		4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	EMILIN2	Q9BXX0	1053 aa		4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	CWC22	Q9HCG8	908 aa	Known RBP	4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	PARP2	Q9UGN5	583 aa		4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	IRAK3	Q9Y616	596 aa		4.19	□□□□□ -1.74
PUM3-204	ENST00000490444	GIPC1	O14908	333 aa		4.18	□□□□□ -1.74
PUM3-204	ENST00000490444	CTSH	P09668	335 aa		4.18	□□□□□ -1.74
PUM3-204	ENST00000490444	ARNT	P27540	789 aa		4.18	□□□□□ -1.74
PUM3-204	ENST00000490444	ATP2B2	Q01814	1243 aa		4.18	□□□□□ -1.74
PUM3-204	ENST00000490444	MRPL58	Q14197	206 aa	Known RBP	4.18	□□□□□ -1.74
PUM3-204	ENST00000490444	ZC3H12A	Q5D1E8	599 aa	Known RBP	4.18	□□□□□ -1.74
PUM3-204	ENST00000490444	LDLRAD1	Q5T700	205 aa		4.18	□□□□□ -1.74
PUM3-204	ENST00000490444	MAP1S	Q66K74	1059 aa	Predicted RBP	4.18	□□□□□ -1.74
PUM3-204	ENST00000490444	ANKRD24	Q8TF21	1146 aa		4.18	□□□□□ -1.74
PUM3-204	ENST00000490444	INTS4	Q96HW7	963 aa	Known RBP	4.18	□□□□□ -1.74
PUM3-204	ENST00000490444	C12orf49	Q9H741	205 aa		4.18	□□□□□ -1.74
PUM3-204	ENST00000490444	CBX8	Q9HC52	389 aa		4.18	□□□□□ -1.74
PUM3-204	ENST00000490444	PICK1	Q9NRD5	415 aa		4.18	□□□□□ -1.74
PUM3-204	ENST00000490444	AKAP2	Q9Y2D5	859 aa		4.18	□□□□□ -1.74
PUM3-204	ENST00000490444	AK5	Q9Y6K8	562 aa		4.18	□□□□□ -1.74
PUM3-204	ENST00000490444	UNCX	A6NJT0	531 aa		4.17	□□□□□ -1.74
PUM3-204	ENST00000490444	PRR33	A8MZF0	331 aa		4.17	□□□□□ -1.74
PUM3-204	ENST00000490444		K7ESM1	405 aa		4.17	□□□□□ -1.74
PUM3-204	ENST00000490444	CILP	O75339	1184 aa		4.17	□□□□□ -1.74
PUM3-204	ENST00000490444	NME2	P22392	152 aa		4.17	□□□□□ -1.74
PUM3-204	ENST00000490444	TRHR	P34981	398 aa	Predicted RBP	4.17	□□□□□ -1.74
PUM3-204	ENST00000490444	ZFYVE27	Q5T4F4	411 aa		4.17	□□□□□ -1.74
PUM3-204	ENST00000490444	SYT8	Q8NBV8	401 aa		4.17	□□□□□ -1.74
PUM3-204	ENST00000490444	GPBAR1	Q8TDU6	330 aa		4.17	□□□□□ -1.74
PUM3-204	ENST00000490444	FAM161B	Q96MY7	647 aa		4.17	□□□□□ -1.74
PUM3-204	ENST00000490444	FRMD6	Q96NE9	622 aa		4.17	□□□□□ -1.74
PUM3-204	ENST00000490444	SRCIN1	Q9C0H9	1055 aa		4.17	□□□□□ -1.74
PUM3-204	ENST00000490444	YBX2	Q9Y2T7	364 aa	Known RBP	4.17	□□□□□ -1.74
PUM3-204	ENST00000490444	MAGEA10	P43363	369 aa	Predicted RBP	4.16	□□□□□ -1.74
PUM3-204	ENST00000490444	FGD1	P98174	961 aa		4.16	□□□□□ -1.74
PUM3-204	ENST00000490444	RTP5	Q14D33	572 aa		4.16	□□□□□ -1.74
PUM3-204	ENST00000490444	NR0B2	Q15466	257 aa		4.16	□□□□□ -1.74
PUM3-204	ENST00000490444	TMPRSS7	Q7RTY8	843 aa		4.16	□□□□□ -1.74
PUM3-204	ENST00000490444	PDZD8	Q8NEN9	1154 aa		4.16	□□□□□ -1.74
PUM3-204	ENST00000490444	STK35	Q8TDR2	534 aa		4.16	□□□□□ -1.74
PUM3-204	ENST00000490444	UBE2F	Q969M7	185 aa		4.16	□□□□□ -1.74
PUM3-204	ENST00000490444	ADAMTS10	Q9H324	1103 aa		4.16	□□□□□ -1.74
PUM3-204	ENST00000490444	SPG7	Q9UQ90	795 aa		4.16	□□□□□ -1.74
PUM3-204	ENST00000490444	SAMM50	Q9Y512	469 aa		4.16	□□□□□ -1.74
PUM3-204	ENST00000490444	CAPN6	Q9Y6Q1	641 aa		4.16	□□□□□ -1.74
PUM3-204	ENST00000490444	C1QTNF3-AMACR	E9PGA6	284 aa		4.15	□□□□□ -1.75
PUM3-204	ENST00000490444	ESR1	P03372	595 aa		4.15	□□□□□ -1.75
PUM3-204	ENST00000490444	USP17L7	P0C7H9	530 aa		4.15	□□□□□ -1.75
PUM3-204	ENST00000490444	ADAM17	P78536	824 aa		4.15	□□□□□ -1.75
PUM3-204	ENST00000490444	PPM1J	Q5JR12	505 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms