RNA–Protein interactions for RNA: ENST00000490419.1

HOXB6-204, Transcript of homeobox B6, humanhuman

TSL 3

Gene HOXB6, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB6-204ENST00000490419 TMOD4Q9NZQ9 345 aa12.15□□□□□ -0.46
HOXB6-204ENST00000490419 GREB1LQ9C091 1923 aaPredicted RBP12.15□□□□□ -0.46
HOXB6-204ENST00000490419 MYH4Q9Y623 1939 aa12.14□□□□□ -0.47
HOXB6-204ENST00000490419 RASA1P20936 1047 aa12.14□□□□□ -0.47
HOXB6-204ENST00000490419 CTDSPL2Q05D32 466 aa12.14□□□□□ -0.47
HOXB6-204ENST00000490419 NOM1Q5C9Z4 860 aaKnown RBP12.14□□□□□ -0.47
HOXB6-204ENST00000490419 SH3D19Q5HYK7 790 aa12.14□□□□□ -0.47
HOXB6-204ENST00000490419 GPAT2Q6NUI2 795 aa12.14□□□□□ -0.47
HOXB6-204ENST00000490419 USP17L2Q6R6M4 530 aa12.14□□□□□ -0.47
HOXB6-204ENST00000490419 DSCC1Q9BVC3 393 aa12.14□□□□□ -0.47
HOXB6-204ENST00000490419 ANAPC4Q9UJX5 808 aa12.14□□□□□ -0.47
HOXB6-204ENST00000490419 AGTPBP1Q9UPW5 1226 aa12.14□□□□□ -0.47
HOXB6-204ENST00000490419 GPR25O00155 361 aa12.13□□□□□ -0.47
HOXB6-204ENST00000490419 PRDM1O75626 825 aa12.13□□□□□ -0.47
HOXB6-204ENST00000490419 USP14P54578 494 aa12.13□□□□□ -0.47
HOXB6-204ENST00000490419 ICA1Q05084 483 aa12.13□□□□□ -0.47
HOXB6-204ENST00000490419 PABPC4Q13310 644 aaKnown RBP eCLIP12.13□□□□□ -0.47
HOXB6-204ENST00000490419 PARK7Q99497 189 aaKnown RBP12.13□□□□□ -0.47
HOXB6-204ENST00000490419 R3HDMLQ9H3Y0 253 aa12.13□□□□□ -0.47
HOXB6-204ENST00000490419 ARHGEF10LQ9HCE6 1279 aa12.13□□□□□ -0.47
HOXB6-204ENST00000490419 CTNNA3Q9UI47 895 aa12.13□□□□□ -0.47
HOXB6-204ENST00000490419 SLC45A1Q9Y2W3 748 aa12.13□□□□□ -0.47
HOXB6-204ENST00000490419 ZNF213O14771 459 aa12.12□□□□□ -0.47
HOXB6-204ENST00000490419 SGSM2O43147 1006 aa12.12□□□□□ -0.47
HOXB6-204ENST00000490419 TLR2O60603 784 aa12.12□□□□□ -0.47
HOXB6-204ENST00000490419 HAND2P61296 217 aa12.12□□□□□ -0.47
HOXB6-204ENST00000490419 DGKZQ13574 1117 aa12.12□□□□□ -0.47
HOXB6-204ENST00000490419 ZYXQ15942 572 aaKnown RBP12.12□□□□□ -0.47
HOXB6-204ENST00000490419 TREML2Q5T2D2 321 aa12.12□□□□□ -0.47
HOXB6-204ENST00000490419 ACER1Q8TDN7 264 aa12.12□□□□□ -0.47
HOXB6-204ENST00000490419 KIAA1683Q9H0B3 1180 aa12.12□□□□□ -0.47
HOXB6-204ENST00000490419 IL25Q9H293 177 aa12.12□□□□□ -0.47
HOXB6-204ENST00000490419 SH2D4AQ9H788 454 aa12.12□□□□□ -0.47
HOXB6-204ENST00000490419 KANSL2Q9H9L4 492 aa12.12□□□□□ -0.47
HOXB6-204ENST00000490419 PNMA3Q9UL41 463 aa12.12□□□□□ -0.47
HOXB6-204ENST00000490419 FKTNO75072 461 aa12.11□□□□□ -0.47
HOXB6-204ENST00000490419 TSPY3P0CV98 308 aa12.11□□□□□ -0.47
HOXB6-204ENST00000490419 TSPY8P0CW00 308 aa12.11□□□□□ -0.47
HOXB6-204ENST00000490419 OSBPP22059 807 aa12.11□□□□□ -0.47
HOXB6-204ENST00000490419 TFAP4Q01664 338 aa12.11□□□□□ -0.47
HOXB6-204ENST00000490419 ATP2B2Q01814 1243 aa12.11□□□□□ -0.47
HOXB6-204ENST00000490419 CASC1Q6TDU7 716 aa12.11□□□□□ -0.47
HOXB6-204ENST00000490419 ZNF296Q8WUU4 475 aaPredicted RBP12.11□□□□□ -0.47
HOXB6-204ENST00000490419 C12orf42Q96LP6 360 aa12.11□□□□□ -0.47
HOXB6-204ENST00000490419 TOMM22Q9NS69 142 aa12.11□□□□□ -0.47
HOXB6-204ENST00000490419 EMILIN3Q9NT22 766 aa12.11□□□□□ -0.47
HOXB6-204ENST00000490419 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.11□□□□□ -0.47
HOXB6-204ENST00000490419 PLIN4Q96Q06 1357 aa12.1□□□□□ -0.47
HOXB6-204ENST00000490419 A0A1W2PRG0 241 aa12.1□□□□□ -0.47
HOXB6-204ENST00000490419 TSPY2A6NKD2 308 aa12.1□□□□□ -0.47
HOXB6-204ENST00000490419 ORC4O43929 436 aa12.1□□□□□ -0.47
HOXB6-204ENST00000490419 RANBP6O60518 1105 aaKnown RBP12.1□□□□□ -0.47
HOXB6-204ENST00000490419 CDC45O75419 566 aa12.1□□□□□ -0.47
HOXB6-204ENST00000490419 FGRP09769 529 aa12.1□□□□□ -0.47
HOXB6-204ENST00000490419 CYP2C8P10632 490 aa12.1□□□□□ -0.47
HOXB6-204ENST00000490419 PCP11498 1178 aaKnown RBP12.1□□□□□ -0.47
HOXB6-204ENST00000490419 EEF2P13639 858 aaKnown RBP12.1□□□□□ -0.47
HOXB6-204ENST00000490419 SP3Q02447 781 aa12.1□□□□□ -0.47
HOXB6-204ENST00000490419 IMMTQ16891 758 aaKnown RBP12.1□□□□□ -0.47
HOXB6-204ENST00000490419 FAM47AQ5JRC9 791 aa12.1□□□□□ -0.47
HOXB6-204ENST00000490419 RRP12Q5JTH9 1297 aaKnown RBP12.1□□□□□ -0.47
HOXB6-204ENST00000490419 AKNAD1Q5T1N1 836 aa12.1□□□□□ -0.47
HOXB6-204ENST00000490419 MFSD6Q6ZSS7 791 aa12.1□□□□□ -0.47
HOXB6-204ENST00000490419 KIAA1211Q6ZU35 1233 aa12.1□□□□□ -0.47
HOXB6-204ENST00000490419 CLEC10AQ8IUN9 316 aa12.1□□□□□ -0.47
HOXB6-204ENST00000490419 NEDD1Q8NHV4 660 aa12.1□□□□□ -0.47
HOXB6-204ENST00000490419 SMCR8Q8TEV9 937 aaPredicted RBP12.1□□□□□ -0.47
HOXB6-204ENST00000490419 ESYT1Q9BSJ8 1104 aa12.1□□□□□ -0.47
HOXB6-204ENST00000490419 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.1□□□□□ -0.47
HOXB6-204ENST00000490419 RNF41Q9H4P4 317 aaPredicted RBP12.1□□□□□ -0.47
HOXB6-204ENST00000490419 INCENPQ9NQS7 918 aa12.1□□□□□ -0.47
HOXB6-204ENST00000490419 TMX2Q9Y320 296 aa12.1□□□□□ -0.47
HOXB6-204ENST00000490419 MGAMO43451 1857 aa12.09□□□□□ -0.47
HOXB6-204ENST00000490419 IGKV6D-41A0A0C4DH26 115 aa12.09□□□□□ -0.47
HOXB6-204ENST00000490419 HOXA7P31268 230 aaPredicted RBP12.09□□□□□ -0.47
HOXB6-204ENST00000490419 IRX3P78415 501 aaPredicted RBP12.09□□□□□ -0.47
HOXB6-204ENST00000490419 PTH1RQ03431 593 aa12.09□□□□□ -0.47
HOXB6-204ENST00000490419 PPP4R3BQ5MIZ7 849 aa12.09□□□□□ -0.47
HOXB6-204ENST00000490419 COL13A1Q5TAT6 717 aaPredicted RBP12.09□□□□□ -0.47
HOXB6-204ENST00000490419 C17orf99Q6UX52 265 aa12.09□□□□□ -0.47
HOXB6-204ENST00000490419 SIAH1Q8IUQ4 282 aa12.09□□□□□ -0.47
HOXB6-204ENST00000490419 STAG1Q8WVM7 1258 aa12.09□□□□□ -0.47
HOXB6-204ENST00000490419 ERO1AQ96HE7 468 aa12.09□□□□□ -0.47
HOXB6-204ENST00000490419 ASCC2Q9H1I8 757 aaPredicted RBP12.09□□□□□ -0.47
HOXB6-204ENST00000490419 NYAP2Q9P242 653 aa12.09□□□□□ -0.47
HOXB6-204ENST00000490419 CPA4Q9UI42 421 aa12.09□□□□□ -0.47
HOXB6-204ENST00000490419 TACC3Q9Y6A5 838 aa12.09□□□□□ -0.47
HOXB6-204ENST00000490419 U3KPZ7 1027 aaPredicted RBP12.09□□□□□ -0.47
HOXB6-204ENST00000490419 ADGRA2Q96PE1 1338 aa12.09□□□□□ -0.47
HOXB6-204ENST00000490419 USP17L15C9J2P7 530 aa12.08□□□□□ -0.48
HOXB6-204ENST00000490419 USP17L13C9JLJ4 530 aa12.08□□□□□ -0.48
HOXB6-204ENST00000490419 USP17L11C9JVI0 530 aa12.08□□□□□ -0.48
HOXB6-204ENST00000490419 USP17L18D6R9N7 530 aa12.08□□□□□ -0.48
HOXB6-204ENST00000490419 USP17L22D6RA61 530 aa12.08□□□□□ -0.48
HOXB6-204ENST00000490419 USP17L17D6RBQ6 530 aa12.08□□□□□ -0.48
HOXB6-204ENST00000490419 USP17L19D6RCP7 530 aa12.08□□□□□ -0.48
HOXB6-204ENST00000490419 USP17L20D6RJB6 530 aa12.08□□□□□ -0.48
HOXB6-204ENST00000490419 VCAM1P19320 739 aa12.08□□□□□ -0.48
HOXB6-204ENST00000490419 NT5C2P49902 561 aa12.08□□□□□ -0.48
HOXB6-204ENST00000490419 USP17L24Q0WX57 530 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms