RNA–Protein interactions for RNA: ENST00000490387.1

RAPGEF3-212, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-212ENST00000490387 SLC44A5Q8NCS7 719 aa20.27■□□□□ 0.84
RAPGEF3-212ENST00000490387 CPA4Q9UI42 421 aa20.27■□□□□ 0.84
RAPGEF3-212ENST00000490387 AFG3L2Q9Y4W6 797 aa20.27■□□□□ 0.84
RAPGEF3-212ENST00000490387 TACC3Q9Y6A5 838 aa20.27■□□□□ 0.84
RAPGEF3-212ENST00000490387 GREB1LQ9C091 1923 aaPredicted RBP20.26■□□□□ 0.83
RAPGEF3-212ENST00000490387 A0A0G2JLL6 359 aaPredicted RBP20.26■□□□□ 0.83
RAPGEF3-212ENST00000490387 EPB41L2O43491 1005 aaKnown RBP20.26■□□□□ 0.83
RAPGEF3-212ENST00000490387 FGRP09769 529 aa20.26■□□□□ 0.83
RAPGEF3-212ENST00000490387 LACTBP83111 547 aaPredicted RBP20.26■□□□□ 0.83
RAPGEF3-212ENST00000490387 RRP1BQ14684 758 aaKnown RBP20.26■□□□□ 0.83
RAPGEF3-212ENST00000490387 NECTIN1Q15223 517 aa20.26■□□□□ 0.83
RAPGEF3-212ENST00000490387 GADL1Q6ZQY3 521 aa20.26■□□□□ 0.83
RAPGEF3-212ENST00000490387 PRRT2Q7Z6L0 340 aaPredicted RBP20.26■□□□□ 0.83
RAPGEF3-212ENST00000490387 CRACR2BQ8N4Y2 399 aaPredicted RBP20.26■□□□□ 0.83
RAPGEF3-212ENST00000490387 PARK7Q99497 189 aaKnown RBP20.26■□□□□ 0.83
RAPGEF3-212ENST00000490387 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.26■□□□□ 0.83
RAPGEF3-212ENST00000490387 SWAP70Q9UH65 585 aa20.26■□□□□ 0.83
RAPGEF3-212ENST00000490387 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.26■□□□□ 0.83
RAPGEF3-212ENST00000490387 TRIM75PA6NK02 468 aa20.25■□□□□ 0.83
RAPGEF3-212ENST00000490387 CDK8P49336 464 aa20.25■□□□□ 0.83
RAPGEF3-212ENST00000490387 HAND2P61296 217 aa20.25■□□□□ 0.83
RAPGEF3-212ENST00000490387 CTDSPL2Q05D32 466 aa20.25■□□□□ 0.83
RAPGEF3-212ENST00000490387 GPAT2Q6NUI2 795 aa20.25■□□□□ 0.83
RAPGEF3-212ENST00000490387 C17orf99Q6UX52 265 aa20.25■□□□□ 0.83
RAPGEF3-212ENST00000490387 CCDC84Q86UT8 332 aaPredicted RBP20.25■□□□□ 0.83
RAPGEF3-212ENST00000490387 TBC1D10CQ8IV04 446 aa20.25■□□□□ 0.83
RAPGEF3-212ENST00000490387 ARHGAP39Q9C0H5 1083 aa20.25■□□□□ 0.83
RAPGEF3-212ENST00000490387 HTTP42858 3142 aa20.25■□□□□ 0.83
RAPGEF3-212ENST00000490387 ECM2O94769 699 aaPredicted RBP20.24■□□□□ 0.83
RAPGEF3-212ENST00000490387 SEC24BO95487 1268 aa20.24■□□□□ 0.83
RAPGEF3-212ENST00000490387 CYP21A2P08686 494 aa20.24■□□□□ 0.83
RAPGEF3-212ENST00000490387 IMMTQ16891 758 aaKnown RBP20.24■□□□□ 0.83
RAPGEF3-212ENST00000490387 USP26Q9BXU7 913 aa20.24■□□□□ 0.83
RAPGEF3-212ENST00000490387 TRIM34Q9BYJ4 488 aa20.24■□□□□ 0.83
RAPGEF3-212ENST00000490387 PTCH2Q9Y6C5 1203 aa20.24■□□□□ 0.83
RAPGEF3-212ENST00000490387 ADGRA2Q96PE1 1338 aa20.24■□□□□ 0.83
RAPGEF3-212ENST00000490387 ZNF213O14771 459 aa20.23■□□□□ 0.83
RAPGEF3-212ENST00000490387 CYP2C8P10632 490 aa20.23■□□□□ 0.83
RAPGEF3-212ENST00000490387 RASA1P20936 1047 aa20.23■□□□□ 0.83
RAPGEF3-212ENST00000490387 STAG1Q8WVM7 1258 aa20.23■□□□□ 0.83
RAPGEF3-212ENST00000490387 TAF6LQ9Y6J9 622 aa20.23■□□□□ 0.83
RAPGEF3-212ENST00000490387 PDE4DIPQ5VU43 2346 aa20.22■□□□□ 0.83
RAPGEF3-212ENST00000490387 SLC27A2O14975 620 aa20.22■□□□□ 0.83
RAPGEF3-212ENST00000490387 ORC4O43929 436 aa20.22■□□□□ 0.83
RAPGEF3-212ENST00000490387 GNRH1P01148 92 aa20.22■□□□□ 0.83
RAPGEF3-212ENST00000490387 SLC3A2P08195 630 aaKnown RBP20.22■□□□□ 0.83
RAPGEF3-212ENST00000490387 CAP2P40123 477 aa20.22■□□□□ 0.83
RAPGEF3-212ENST00000490387 JAG1P78504 1218 aa20.22■□□□□ 0.83
RAPGEF3-212ENST00000490387 AKNAD1Q5T1N1 836 aa20.22■□□□□ 0.83
RAPGEF3-212ENST00000490387 CREB3L3Q68CJ9 461 aa20.22■□□□□ 0.83
RAPGEF3-212ENST00000490387 KCNB2Q92953 911 aa20.22■□□□□ 0.83
RAPGEF3-212ENST00000490387 ARMC5Q96C12 935 aa20.22■□□□□ 0.83
RAPGEF3-212ENST00000490387 TBC1D2Q9BYX2 928 aa20.22■□□□□ 0.83
RAPGEF3-212ENST00000490387 INCENPQ9NQS7 918 aa20.22■□□□□ 0.83
RAPGEF3-212ENST00000490387 KIAA0100Q14667 2235 aaKnown RBP20.22■□□□□ 0.83
RAPGEF3-212ENST00000490387 MGAMO43451 1857 aa20.22■□□□□ 0.83
RAPGEF3-212ENST00000490387 RBBP6Q7Z6E9 1792 aaKnown RBP20.21■□□□□ 0.83
RAPGEF3-212ENST00000490387 PCP11498 1178 aaKnown RBP20.21■□□□□ 0.83
RAPGEF3-212ENST00000490387 HSPA4P34932 840 aa20.21■□□□□ 0.83
RAPGEF3-212ENST00000490387 PDE4BQ07343 736 aa20.21■□□□□ 0.83
RAPGEF3-212ENST00000490387 SHROOM1Q2M3G4 852 aaPredicted RBP20.21■□□□□ 0.83
RAPGEF3-212ENST00000490387 SLC9C1Q4G0N8 1177 aa20.21■□□□□ 0.83
RAPGEF3-212ENST00000490387 SLC45A1Q9Y2W3 748 aa20.21■□□□□ 0.83
RAPGEF3-212ENST00000490387 LOC285556D6RIA3 1793 aa20.21■□□□□ 0.83
RAPGEF3-212ENST00000490387 CENPFP49454 3210 aa20.2■□□□□ 0.82
RAPGEF3-212ENST00000490387 USP17L5A8MUK1 530 aa20.2■□□□□ 0.82
RAPGEF3-212ENST00000490387 EIF5BO60841 1220 aaKnown RBP20.2■□□□□ 0.82
RAPGEF3-212ENST00000490387 PRDM1O75626 825 aa20.2■□□□□ 0.82
RAPGEF3-212ENST00000490387 PSMC4P43686 418 aa20.2■□□□□ 0.82
RAPGEF3-212ENST00000490387 SPP2Q13103 211 aa20.2■□□□□ 0.82
RAPGEF3-212ENST00000490387 CERKLQ49MI3 558 aaPredicted RBP20.2■□□□□ 0.82
RAPGEF3-212ENST00000490387 NBPF11Q86T75 865 aa20.2■□□□□ 0.82
RAPGEF3-212ENST00000490387 STK11IPQ8N1F8 1099 aa20.2■□□□□ 0.82
RAPGEF3-212ENST00000490387 ZNF280CQ8ND82 737 aa20.2■□□□□ 0.82
RAPGEF3-212ENST00000490387 ZNF287Q9HBT7 754 aa20.2■□□□□ 0.82
RAPGEF3-212ENST00000490387 AGTPBP1Q9UPW5 1226 aa20.2■□□□□ 0.82
RAPGEF3-212ENST00000490387 NEDD4P46934 1319 aa20.2■□□□□ 0.82
RAPGEF3-212ENST00000490387 PLIN4Q96Q06 1357 aa20.2■□□□□ 0.82
RAPGEF3-212ENST00000490387 FMNL1O95466 1100 aaPredicted RBP20.19■□□□□ 0.82
RAPGEF3-212ENST00000490387 PRMT2P55345 433 aa20.19■□□□□ 0.82
RAPGEF3-212ENST00000490387 TSGA10IPQ3SY00 556 aa20.19■□□□□ 0.82
RAPGEF3-212ENST00000490387 MFSD6Q6ZSS7 791 aa20.19■□□□□ 0.82
RAPGEF3-212ENST00000490387 STOX1Q6ZVD7 989 aa20.19■□□□□ 0.82
RAPGEF3-212ENST00000490387 NKX2-3Q8TAU0 364 aa20.19■□□□□ 0.82
RAPGEF3-212ENST00000490387 SMCR8Q8TEV9 937 aaPredicted RBP20.19■□□□□ 0.82
RAPGEF3-212ENST00000490387 CCDC17Q96LX7 622 aa20.19■□□□□ 0.82
RAPGEF3-212ENST00000490387 RNF41Q9H4P4 317 aaPredicted RBP20.19■□□□□ 0.82
RAPGEF3-212ENST00000490387 AS3MTQ9HBK9 375 aa20.19■□□□□ 0.82
RAPGEF3-212ENST00000490387 GINM1Q9NU53 330 aa20.19■□□□□ 0.82
RAPGEF3-212ENST00000490387 TNRC18O15417 2968 aaPredicted RBP20.18■□□□□ 0.82
RAPGEF3-212ENST00000490387 GDF11O95390 407 aa20.18■□□□□ 0.82
RAPGEF3-212ENST00000490387 BCRP11274 1271 aa20.18■□□□□ 0.82
RAPGEF3-212ENST00000490387 AKR1B1P15121 316 aa20.18■□□□□ 0.82
RAPGEF3-212ENST00000490387 HOXD10P28358 340 aa20.18■□□□□ 0.82
RAPGEF3-212ENST00000490387 CTGFP29279 349 aa20.18■□□□□ 0.82
RAPGEF3-212ENST00000490387 GUCY1A2P33402 732 aa20.18■□□□□ 0.82
RAPGEF3-212ENST00000490387 RASEFQ8IZ41 740 aa20.18■□□□□ 0.82
RAPGEF3-212ENST00000490387 PROCA1Q8NCQ7 364 aaPredicted RBP20.18■□□□□ 0.82
RAPGEF3-212ENST00000490387 ZNF333Q96JL9 665 aa20.18■□□□□ 0.82
RAPGEF3-212ENST00000490387 TRIM47Q96LD4 638 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms