RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 PDE4BQ07343 736 aa17.09■□□□□ 0.33
SRGAP3-208ENST00000490348 SH3D19Q5HYK7 790 aa17.09■□□□□ 0.33
SRGAP3-208ENST00000490348 TREML2Q5T2D2 321 aa17.09■□□□□ 0.33
SRGAP3-208ENST00000490348 AS3MTQ9HBK9 375 aa17.09■□□□□ 0.33
SRGAP3-208ENST00000490348 SAGE1Q9NXZ1 904 aa17.09■□□□□ 0.33
SRGAP3-208ENST00000490348 IGKV6D-41A0A0C4DH26 115 aa17.08■□□□□ 0.32
SRGAP3-208ENST00000490348 SLC3A2P08195 630 aaKnown RBP17.08■□□□□ 0.32
SRGAP3-208ENST00000490348 FAM47AQ5JRC9 791 aa17.08■□□□□ 0.32
SRGAP3-208ENST00000490348 MAP4K1Q92918 833 aa17.08■□□□□ 0.32
SRGAP3-208ENST00000490348 ZNF287Q9HBT7 754 aa17.08■□□□□ 0.32
SRGAP3-208ENST00000490348 TAF6LQ9Y6J9 622 aa17.08■□□□□ 0.32
SRGAP3-208ENST00000490348 LOC285556D6RIA3 1793 aa17.08■□□□□ 0.32
SRGAP3-208ENST00000490348 PLIN4Q96Q06 1357 aa17.08■□□□□ 0.32
SRGAP3-208ENST00000490348 USP17L10C9JJH3 530 aa17.07■□□□□ 0.32
SRGAP3-208ENST00000490348 ZNF213O14771 459 aa17.07■□□□□ 0.32
SRGAP3-208ENST00000490348 ORC4O43929 436 aa17.07■□□□□ 0.32
SRGAP3-208ENST00000490348 TBC1D8O95759 1140 aa17.07■□□□□ 0.32
SRGAP3-208ENST00000490348 ICA1Q05084 483 aa17.07■□□□□ 0.32
SRGAP3-208ENST00000490348 GADL1Q6ZQY3 521 aa17.07■□□□□ 0.32
SRGAP3-208ENST00000490348 ANKRD23Q86SG2 305 aa17.07■□□□□ 0.32
SRGAP3-208ENST00000490348 ZNF444Q8N0Y2 327 aaPredicted RBP17.07■□□□□ 0.32
SRGAP3-208ENST00000490348 STAG1Q8WVM7 1258 aa17.07■□□□□ 0.32
SRGAP3-208ENST00000490348 BEGAINQ9BUH8 593 aa17.07■□□□□ 0.32
SRGAP3-208ENST00000490348 EMILIN3Q9NT22 766 aa17.07■□□□□ 0.32
SRGAP3-208ENST00000490348 NEDD4P46934 1319 aa17.07■□□□□ 0.32
SRGAP3-208ENST00000490348 CA12O43570 354 aa17.06■□□□□ 0.32
SRGAP3-208ENST00000490348 HSPA8P11142 646 aaKnown RBP17.06■□□□□ 0.32
SRGAP3-208ENST00000490348 TFAP4Q01664 338 aa17.06■□□□□ 0.32
SRGAP3-208ENST00000490348 CRHR2Q13324 411 aa17.06■□□□□ 0.32
SRGAP3-208ENST00000490348 AKNAD1Q5T1N1 836 aa17.06■□□□□ 0.32
SRGAP3-208ENST00000490348 FASTKD5Q7L8L6 764 aaKnown RBP17.06■□□□□ 0.32
SRGAP3-208ENST00000490348 CFHR5Q9BXR6 569 aa17.06■□□□□ 0.32
SRGAP3-208ENST00000490348 KIAA1683Q9H0B3 1180 aa17.06■□□□□ 0.32
SRGAP3-208ENST00000490348 CTNNA3Q9UI47 895 aa17.06■□□□□ 0.32
SRGAP3-208ENST00000490348 PDHXO00330 501 aa17.06■□□□□ 0.32
SRGAP3-208ENST00000490348 CYP21A2P08686 494 aa17.06■□□□□ 0.32
SRGAP3-208ENST00000490348 EEF2P13639 858 aaKnown RBP17.06■□□□□ 0.32
SRGAP3-208ENST00000490348 ZYXQ15942 572 aaKnown RBP17.06■□□□□ 0.32
SRGAP3-208ENST00000490348 KIAA1755Q5JYT7 1200 aa17.06■□□□□ 0.32
SRGAP3-208ENST00000490348 PROCA1Q8NCQ7 364 aaPredicted RBP17.06■□□□□ 0.32
SRGAP3-208ENST00000490348 NEDD1Q8NHV4 660 aa17.06■□□□□ 0.32
SRGAP3-208ENST00000490348 CEP95Q96GE4 821 aa17.06■□□□□ 0.32
SRGAP3-208ENST00000490348 KANSL2Q9H9L4 492 aa17.06■□□□□ 0.32
SRGAP3-208ENST00000490348 AGTPBP1Q9UPW5 1226 aa17.06■□□□□ 0.32
SRGAP3-208ENST00000490348 RBM8AQ9Y5S9 174 aaKnown RBP17.06■□□□□ 0.32
SRGAP3-208ENST00000490348 C19orf81C9J6K1 198 aa17.05■□□□□ 0.32
SRGAP3-208ENST00000490348 NMT2O60551 498 aa17.05■□□□□ 0.32
SRGAP3-208ENST00000490348 ALDH1A1P00352 501 aa17.05■□□□□ 0.32
SRGAP3-208ENST00000490348 IMMTQ16891 758 aaKnown RBP17.05■□□□□ 0.32
SRGAP3-208ENST00000490348 OTUD7BQ6GQQ9 843 aa17.05■□□□□ 0.32
SRGAP3-208ENST00000490348 ZCCHC17Q9NP64 241 aaKnown RBP17.05■□□□□ 0.32
SRGAP3-208ENST00000490348 ANO2Q9NQ90 1003 aa17.05■□□□□ 0.32
SRGAP3-208ENST00000490348 IL17RBQ9NRM6 502 aa17.05■□□□□ 0.32
SRGAP3-208ENST00000490348 U3KPZ7 1027 aaPredicted RBP17.05■□□□□ 0.32
SRGAP3-208ENST00000490348 RANBP6O60518 1105 aaKnown RBP17.04■□□□□ 0.32
SRGAP3-208ENST00000490348 TSPY3P0CV98 308 aa17.04■□□□□ 0.32
SRGAP3-208ENST00000490348 TSPY8P0CW00 308 aa17.04■□□□□ 0.32
SRGAP3-208ENST00000490348 LBX1P52954 281 aa17.04■□□□□ 0.32
SRGAP3-208ENST00000490348 RRP12Q5JTH9 1297 aaKnown RBP17.04■□□□□ 0.32
SRGAP3-208ENST00000490348 CASC1Q6TDU7 716 aa17.04■□□□□ 0.32
SRGAP3-208ENST00000490348 MFSD6Q6ZSS7 791 aa17.04■□□□□ 0.32
SRGAP3-208ENST00000490348 C12orf42Q96LP6 360 aa17.04■□□□□ 0.32
SRGAP3-208ENST00000490348 FEZ1Q99689 392 aa17.04■□□□□ 0.32
SRGAP3-208ENST00000490348 MTMR4Q9NYA4 1195 aa17.04■□□□□ 0.32
SRGAP3-208ENST00000490348 TMX2Q9Y320 296 aa17.04■□□□□ 0.32
SRGAP3-208ENST00000490348 GTF3C3Q9Y5Q9 886 aa17.04■□□□□ 0.32
SRGAP3-208ENST00000490348 CYP2C8P10632 490 aa17.03■□□□□ 0.32
SRGAP3-208ENST00000490348 PCP11498 1178 aaKnown RBP17.03■□□□□ 0.32
SRGAP3-208ENST00000490348 CTCFP49711 727 aaPredicted RBP17.03■□□□□ 0.32
SRGAP3-208ENST00000490348 TAF1CQ15572 869 aaPredicted RBP17.03■□□□□ 0.32
SRGAP3-208ENST00000490348 USP17L2Q6R6M4 530 aa17.03■□□□□ 0.32
SRGAP3-208ENST00000490348 KIAA1211Q6ZU35 1233 aa17.03■□□□□ 0.32
SRGAP3-208ENST00000490348 ADGRA2Q96PE1 1338 aa17.03■□□□□ 0.32
SRGAP3-208ENST00000490348 TSPY2A6NKD2 308 aa17.02■□□□□ 0.32
SRGAP3-208ENST00000490348 VCAM1P19320 739 aa17.02■□□□□ 0.32
SRGAP3-208ENST00000490348 NOVP48745 357 aa17.02■□□□□ 0.32
SRGAP3-208ENST00000490348 ATP2B2Q01814 1243 aa17.02■□□□□ 0.32
SRGAP3-208ENST00000490348 STOX1Q6ZVD7 989 aa17.02■□□□□ 0.32
SRGAP3-208ENST00000490348 RNF41Q9H4P4 317 aaPredicted RBP17.02■□□□□ 0.32
SRGAP3-208ENST00000490348 ARHGEF10LQ9HCE6 1279 aa17.02■□□□□ 0.32
SRGAP3-208ENST00000490348 TOMM22Q9NS69 142 aa17.02■□□□□ 0.32
SRGAP3-208ENST00000490348 TMOD4Q9NZQ9 345 aa17.02■□□□□ 0.32
SRGAP3-208ENST00000490348 NYAP2Q9P242 653 aa17.02■□□□□ 0.32
SRGAP3-208ENST00000490348 SLC45A1Q9Y2W3 748 aa17.02■□□□□ 0.32
SRGAP3-208ENST00000490348 USP14P54578 494 aa17.02■□□□□ 0.31
SRGAP3-208ENST00000490348 NECTIN1Q15223 517 aa17.02■□□□□ 0.31
SRGAP3-208ENST00000490348 CLIP2Q9UDT6 1046 aa17.02■□□□□ 0.31
SRGAP3-208ENST00000490348 B4E1Z4 1266 aa17.01■□□□□ 0.31
SRGAP3-208ENST00000490348 HOXA7P31268 230 aaPredicted RBP17.01■□□□□ 0.31
SRGAP3-208ENST00000490348 COL9A3Q14050 684 aaPredicted RBP17.01■□□□□ 0.31
SRGAP3-208ENST00000490348 SPICE1Q8N0Z3 855 aa17.01■□□□□ 0.31
SRGAP3-208ENST00000490348 MKL1Q969V6 931 aa17.01■□□□□ 0.31
SRGAP3-208ENST00000490348 VCPKMTQ9H867 229 aa17.01■□□□□ 0.31
SRGAP3-208ENST00000490348 E7EWF7 191 aa17■□□□□ 0.31
SRGAP3-208ENST00000490348 GPR25O00155 361 aa17■□□□□ 0.31
SRGAP3-208ENST00000490348 SLC27A2O14975 620 aa17■□□□□ 0.31
SRGAP3-208ENST00000490348 TLR2O60603 784 aa17■□□□□ 0.31
SRGAP3-208ENST00000490348 KDM4AO75164 1064 aa17■□□□□ 0.31
SRGAP3-208ENST00000490348 TTLL1O95922 423 aa17■□□□□ 0.31
SRGAP3-208ENST00000490348 CREB3L3Q68CJ9 461 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms