RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 LSSP48449 732 aa3.9□□□□□ -1.78
UBXN4-208ENST00000490163 AP3B2Q13367 1082 aa3.9□□□□□ -1.78
UBXN4-208ENST00000490163 RAPGEF1Q13905 1077 aa3.9□□□□□ -1.78
UBXN4-208ENST00000490163 PASD1Q8IV76 773 aa3.9□□□□□ -1.78
UBXN4-208ENST00000490163 CPA6Q8N4T0 437 aa3.9□□□□□ -1.78
UBXN4-208ENST00000490163 ZSCAN1Q8NBB4 408 aa3.9□□□□□ -1.78
UBXN4-208ENST00000490163 CHMP7Q8WUX9 453 aaPredicted RBP3.9□□□□□ -1.78
UBXN4-208ENST00000490163 ZFYVE21Q9BQ24 234 aa3.9□□□□□ -1.78
UBXN4-208ENST00000490163 ZCCHC2Q9C0B9 1178 aaKnown RBP3.9□□□□□ -1.78
UBXN4-208ENST00000490163 TCEAL9Q9UHQ7 104 aa3.9□□□□□ -1.78
UBXN4-208ENST00000490163 LAS1LQ9Y4W2 734 aaKnown RBP3.9□□□□□ -1.78
UBXN4-208ENST00000490163 MINDY4BA8MYZ0 360 aa3.9□□□□□ -1.79
UBXN4-208ENST00000490163 ZRANB2O95218 330 aaKnown RBP eCLIP3.9□□□□□ -1.79
UBXN4-208ENST00000490163 CKMP06732 381 aa3.9□□□□□ -1.79
UBXN4-208ENST00000490163 BAG6P46379 1132 aa3.9□□□□□ -1.79
UBXN4-208ENST00000490163 HYAL2Q12891 473 aa3.9□□□□□ -1.79
UBXN4-208ENST00000490163 DUSP27Q5VZP5 1158 aa3.9□□□□□ -1.79
UBXN4-208ENST00000490163 SPRYD7Q5W111 196 aa3.9□□□□□ -1.79
UBXN4-208ENST00000490163 MAMDC2Q7Z304 686 aaPredicted RBP3.9□□□□□ -1.79
UBXN4-208ENST00000490163 SLC7A14Q8TBB6 771 aa3.9□□□□□ -1.79
UBXN4-208ENST00000490163 OSMRQ99650 979 aa3.9□□□□□ -1.79
UBXN4-208ENST00000490163 GRB10Q13322 594 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 GNASQ5JWF2 1037 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 ZFYVE27Q5T4F4 411 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 C6orf15Q6UXA7 325 aaPredicted RBP3.89□□□□□ -1.79
UBXN4-208ENST00000490163 KIAA0319LQ8IZA0 1049 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 ARHGEF39Q8N4T4 335 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 HOOK2Q96ED9 719 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 CCDC136Q96JN2 1154 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 TBATAQ96M53 351 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 CCDC140Q96MF4 163 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 KLHL25Q9H0H3 589 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 CSRNP2Q9H175 543 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 APOBEC2Q9Y235 224 aaKnown RBP3.89□□□□□ -1.79
UBXN4-208ENST00000490163 TRAV20A0A0B4J274 112 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 CES1P23141 567 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 GUCY2FP51841 1108 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 GABREP78334 506 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 NFKB2Q00653 900 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 MCATQ8IVS2 390 aaKnown RBP3.89□□□□□ -1.79
UBXN4-208ENST00000490163 NLRP3Q96P20 1036 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.89□□□□□ -1.79
UBXN4-208ENST00000490163 RASSF1Q9NS23 344 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 PDP2Q9P2J9 529 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 WASF3Q9UPY6 502 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 IPPQ9Y573 584 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 GADD45BO75293 160 aaPredicted RBP3.89□□□□□ -1.79
UBXN4-208ENST00000490163 PAPLNO95428 1278 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 ESRRAP11474 423 aaPredicted RBP3.89□□□□□ -1.79
UBXN4-208ENST00000490163 USP14P54578 494 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 STAT4Q14765 748 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 C8orf34Q49A92 452 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 AXDND1Q5T1B0 1012 aaPredicted RBP3.89□□□□□ -1.79
UBXN4-208ENST00000490163 KRBA2Q6ZNG9 492 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 EPM2AIP1Q7L775 607 aaPredicted RBP3.89□□□□□ -1.79
UBXN4-208ENST00000490163 Q8N1Y9 231 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 BSNDQ8WZ55 320 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 SLC9A7Q96T83 725 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 GDF15Q99988 308 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 TSEN34Q9BSV6 310 aaKnown RBP3.89□□□□□ -1.79
UBXN4-208ENST00000490163 RBSNQ9H1K0 784 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 SUCOQ9UBS9 1254 aaKnown RBP3.89□□□□□ -1.79
UBXN4-208ENST00000490163 DACH1Q9UI36 760 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 NCAPD3P42695 1498 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 CECR2Q9BXF3 1484 aa3.89□□□□□ -1.79
UBXN4-208ENST00000490163 ANKRD34BA5PLL1 514 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 B2RBV5 119 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 RGS13O14921 159 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 PRPF3O43395 683 aaKnown RBP3.88□□□□□ -1.79
UBXN4-208ENST00000490163 TATP17735 454 aaPredicted RBP3.88□□□□□ -1.79
UBXN4-208ENST00000490163 FAM160A1Q05DH4 1040 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 SSRP1Q08945 709 aaKnown RBP3.88□□□□□ -1.79
UBXN4-208ENST00000490163 PCBP1Q15365 356 aaKnown RBP eCLIP3.88□□□□□ -1.79
UBXN4-208ENST00000490163 ZYXQ15942 572 aaKnown RBP3.88□□□□□ -1.79
UBXN4-208ENST00000490163 DDX46Q7L014 1031 aaKnown RBP3.88□□□□□ -1.79
UBXN4-208ENST00000490163 E2F7Q96AV8 911 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 ITPKCQ96DU7 683 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 TTC14Q96N46 770 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 AARSD1Q9BTE6 412 aaKnown RBP3.88□□□□□ -1.79
UBXN4-208ENST00000490163 SELENOOQ9BVL4 669 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 CDIP1Q9H305 208 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 B4GALT6Q9UBX8 382 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 TRBV23-1A0A0A0MS06 115 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 TCRBV16S1A1N1A0A5B0 115 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 MEGF11A6BM72 1044 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 H3BRJ5 948 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 ARNTLO00327 626 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 ZNF862O60290 1169 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 GRIN3BO60391 1043 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 SARSP49591 514 aaKnown RBP3.88□□□□□ -1.79
UBXN4-208ENST00000490163 MLC1Q15049 377 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 MZT2AQ6P582 158 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 TRIM67Q6ZTA4 783 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 TRIM59Q8IWR1 403 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 TMEM192Q8IY95 271 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 KREMEN2Q8NCW0 462 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 EHBP1Q8NDI1 1231 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 HERPUD2Q9BSE4 406 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 MIR1-1HGQ9H1L0 117 aa3.88□□□□□ -1.79
UBXN4-208ENST00000490163 PRDM11Q9NQV5 511 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms