RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 SNX14Q9Y5W7 946 aa14.74□□□□□ -0.05
HDAC1-210ENST00000490081 NEDD4P46934 1319 aa14.73□□□□□ -0.05
HDAC1-210ENST00000490081 TSPY2A6NKD2 308 aa14.73□□□□□ -0.05
HDAC1-210ENST00000490081 RANBP6O60518 1105 aaKnown RBP14.73□□□□□ -0.05
HDAC1-210ENST00000490081 PRDM1O75626 825 aa14.73□□□□□ -0.05
HDAC1-210ENST00000490081 PPIL2Q13356 520 aa14.73□□□□□ -0.05
HDAC1-210ENST00000490081 SPRYD7Q5W111 196 aa14.73□□□□□ -0.05
HDAC1-210ENST00000490081 CYP4F22Q6NT55 531 aa14.73□□□□□ -0.05
HDAC1-210ENST00000490081 STOX1Q6ZVD7 989 aa14.73□□□□□ -0.05
HDAC1-210ENST00000490081 DGKHQ86XP1 1220 aa14.73□□□□□ -0.05
HDAC1-210ENST00000490081 SIAH1Q8IUQ4 282 aa14.73□□□□□ -0.05
HDAC1-210ENST00000490081 MB21D2Q8IYB1 491 aaPredicted RBP14.73□□□□□ -0.05
HDAC1-210ENST00000490081 FBXL16Q8N461 479 aa14.73□□□□□ -0.05
HDAC1-210ENST00000490081 CLMNQ96JQ2 1002 aa14.73□□□□□ -0.05
HDAC1-210ENST00000490081 CAPNS2Q96L46 248 aa14.73□□□□□ -0.05
HDAC1-210ENST00000490081 NEK1Q96PY6 1258 aa14.73□□□□□ -0.05
HDAC1-210ENST00000490081 AS3MTQ9HBK9 375 aa14.73□□□□□ -0.05
HDAC1-210ENST00000490081 MTMR4Q9NYA4 1195 aa14.73□□□□□ -0.05
HDAC1-210ENST00000490081 TAF6LQ9Y6J9 622 aa14.73□□□□□ -0.05
HDAC1-210ENST00000490081 FAM155AB1AL88 458 aaPredicted RBP14.72□□□□□ -0.05
HDAC1-210ENST00000490081 C19orf81C9J6K1 198 aa14.72□□□□□ -0.05
HDAC1-210ENST00000490081 GDF11O95390 407 aa14.72□□□□□ -0.05
HDAC1-210ENST00000490081 SLC10A3P09131 477 aa14.72□□□□□ -0.05
HDAC1-210ENST00000490081 HSPA8P11142 646 aaKnown RBP14.72□□□□□ -0.05
HDAC1-210ENST00000490081 PSMA5P28066 241 aa14.72□□□□□ -0.05
HDAC1-210ENST00000490081 ZNF157P51786 506 aaPredicted RBP14.72□□□□□ -0.05
HDAC1-210ENST00000490081 INHBEP58166 350 aa14.72□□□□□ -0.05
HDAC1-210ENST00000490081 MAP2K1Q02750 393 aaPredicted RBP14.72□□□□□ -0.05
HDAC1-210ENST00000490081 SEPT2Q15019 361 aa14.72□□□□□ -0.05
HDAC1-210ENST00000490081 SH3D19Q5HYK7 790 aa14.72□□□□□ -0.05
HDAC1-210ENST00000490081 RALYLQ86SE5 291 aaKnown RBP14.72□□□□□ -0.05
HDAC1-210ENST00000490081 IQCA1Q86XH1 822 aa14.72□□□□□ -0.05
HDAC1-210ENST00000490081 REM2Q8IYK8 340 aaPredicted RBP14.72□□□□□ -0.05
HDAC1-210ENST00000490081 ZNF280CQ8ND82 737 aa14.72□□□□□ -0.05
HDAC1-210ENST00000490081 UPF2Q9HAU5 1272 aaKnown RBP14.72□□□□□ -0.05
HDAC1-210ENST00000490081 IL17RBQ9NRM6 502 aa14.72□□□□□ -0.05
HDAC1-210ENST00000490081 PTPRFP10586 1907 aa14.72□□□□□ -0.05
HDAC1-210ENST00000490081 TESPA1A2RU30 521 aaPredicted RBP14.71□□□□□ -0.05
HDAC1-210ENST00000490081 B4E1Z4 1266 aa14.71□□□□□ -0.05
HDAC1-210ENST00000490081 KDM4AO75164 1064 aa14.71□□□□□ -0.05
HDAC1-210ENST00000490081 MCM5P33992 734 aa14.71□□□□□ -0.05
HDAC1-210ENST00000490081 ECE1P42892 770 aa14.71□□□□□ -0.05
HDAC1-210ENST00000490081 EXOSC10Q01780 885 aaKnown RBP14.71□□□□□ -0.05
HDAC1-210ENST00000490081 DHX32Q7L7V1 743 aaKnown RBP14.71□□□□□ -0.05
HDAC1-210ENST00000490081 RASAL3Q86YV0 1011 aa14.71□□□□□ -0.05
HDAC1-210ENST00000490081 OPTNQ96CV9 577 aa14.71□□□□□ -0.05
HDAC1-210ENST00000490081 WNK4Q96J92 1243 aa14.71□□□□□ -0.05
HDAC1-210ENST00000490081 TMEM87BQ96K49 555 aa14.71□□□□□ -0.05
HDAC1-210ENST00000490081 KIAA1683Q9H0B3 1180 aa14.71□□□□□ -0.05
HDAC1-210ENST00000490081 ELP3Q9H9T3 547 aa14.71□□□□□ -0.05
HDAC1-210ENST00000490081 ZSWIM6Q9HCJ5 1215 aa14.71□□□□□ -0.05
HDAC1-210ENST00000490081 TOMM22Q9NS69 142 aa14.71□□□□□ -0.05
HDAC1-210ENST00000490081 TMX2Q9Y320 296 aa14.71□□□□□ -0.05
HDAC1-210ENST00000490081 ZHX2Q9Y6X8 837 aa14.71□□□□□ -0.05
HDAC1-210ENST00000490081 MYH4Q9Y623 1939 aa14.7□□□□□ -0.06
HDAC1-210ENST00000490081 MPHOSPH10O00566 681 aaKnown RBP14.7□□□□□ -0.06
HDAC1-210ENST00000490081 CAPN15O75808 1086 aa14.7□□□□□ -0.06
HDAC1-210ENST00000490081 TTLL1O95922 423 aa14.7□□□□□ -0.06
HDAC1-210ENST00000490081 LBX1P52954 281 aa14.7□□□□□ -0.06
HDAC1-210ENST00000490081 BACE1P56817 501 aa14.7□□□□□ -0.06
HDAC1-210ENST00000490081 ADCK5Q3MIX3 580 aa14.7□□□□□ -0.06
HDAC1-210ENST00000490081 FAM47AQ5JRC9 791 aa14.7□□□□□ -0.06
HDAC1-210ENST00000490081 STK11IPQ8N1F8 1099 aa14.7□□□□□ -0.06
HDAC1-210ENST00000490081 TMTC2Q8N394 836 aa14.7□□□□□ -0.06
HDAC1-210ENST00000490081 ZSCAN10Q96SZ4 725 aaPredicted RBP14.7□□□□□ -0.06
HDAC1-210ENST00000490081 C22orf23Q9BZE7 217 aa14.7□□□□□ -0.06
HDAC1-210ENST00000490081 ALDH8A1Q9H2A2 487 aaPredicted RBP14.7□□□□□ -0.06
HDAC1-210ENST00000490081 SH2D4AQ9H788 454 aa14.7□□□□□ -0.06
HDAC1-210ENST00000490081 ARHGEF10LQ9HCE6 1279 aa14.7□□□□□ -0.06
HDAC1-210ENST00000490081 A0A0G2JLL6 359 aaPredicted RBP14.69□□□□□ -0.06
HDAC1-210ENST00000490081 USP17L10C9JJH3 530 aa14.69□□□□□ -0.06
HDAC1-210ENST00000490081 IRF6O14896 467 aa14.69□□□□□ -0.06
HDAC1-210ENST00000490081 EEF2P13639 858 aaKnown RBP14.69□□□□□ -0.06
HDAC1-210ENST00000490081 GJA5P36382 358 aa14.69□□□□□ -0.06
HDAC1-210ENST00000490081 MAP2K2P36507 400 aa14.69□□□□□ -0.06
HDAC1-210ENST00000490081 LIFRP42702 1097 aa14.69□□□□□ -0.06
HDAC1-210ENST00000490081 GTF2A2P52657 109 aa14.69□□□□□ -0.06
HDAC1-210ENST00000490081 USP14P54578 494 aa14.69□□□□□ -0.06
HDAC1-210ENST00000490081 ICA1Q05084 483 aa14.69□□□□□ -0.06
HDAC1-210ENST00000490081 NOGQ13253 232 aa14.69□□□□□ -0.06
HDAC1-210ENST00000490081 SNAPC2Q13487 334 aa14.69□□□□□ -0.06
HDAC1-210ENST00000490081 SART3Q15020 963 aaKnown RBP14.69□□□□□ -0.06
HDAC1-210ENST00000490081 RAB3GAP1Q15042 981 aa14.69□□□□□ -0.06
HDAC1-210ENST00000490081 SEC23AQ15436 765 aa14.69□□□□□ -0.06
HDAC1-210ENST00000490081 SHROOM1Q2M3G4 852 aaPredicted RBP14.69□□□□□ -0.06
HDAC1-210ENST00000490081 RRP12Q5JTH9 1297 aaKnown RBP14.69□□□□□ -0.06
HDAC1-210ENST00000490081 RCSD1Q6JBY9 416 aa14.69□□□□□ -0.06
HDAC1-210ENST00000490081 CYB5R4Q7L1T6 521 aa14.69□□□□□ -0.06
HDAC1-210ENST00000490081 PRRT2Q7Z6L0 340 aaPredicted RBP14.69□□□□□ -0.06
HDAC1-210ENST00000490081 NKX2-3Q8TAU0 364 aa14.69□□□□□ -0.06
HDAC1-210ENST00000490081 IGDCC4Q8TDY8 1250 aa14.69□□□□□ -0.06
HDAC1-210ENST00000490081 CEP95Q96GE4 821 aa14.69□□□□□ -0.06
HDAC1-210ENST00000490081 MS4A4AQ96JQ5 239 aa14.69□□□□□ -0.06
HDAC1-210ENST00000490081 C12orf42Q96LP6 360 aa14.69□□□□□ -0.06
HDAC1-210ENST00000490081 AGXT2Q9BYV1 514 aa14.69□□□□□ -0.06
HDAC1-210ENST00000490081 MANSC4A6NHS7 340 aaPredicted RBP14.68□□□□□ -0.06
HDAC1-210ENST00000490081 AOC2O75106 756 aa14.68□□□□□ -0.06
HDAC1-210ENST00000490081 TM4SF4P48230 202 aa14.68□□□□□ -0.06
HDAC1-210ENST00000490081 ANTXR2P58335 489 aa14.68□□□□□ -0.06
HDAC1-210ENST00000490081 SPP2Q13103 211 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms