RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 UPK3BL2E5RIL1 263 aa6.84□□□□□ -1.31
HMGN1-218ENST00000490032 RBAK-RBAKDNI3L0D1 243 aa6.84□□□□□ -1.31
HMGN1-218ENST00000490032 YARSP54577 528 aaKnown RBP6.84□□□□□ -1.31
HMGN1-218ENST00000490032 FAM160A1Q05DH4 1040 aa6.84□□□□□ -1.31
HMGN1-218ENST00000490032 SNAP47Q5SQN1 464 aa6.84□□□□□ -1.31
HMGN1-218ENST00000490032 FAM196AQ6ZSG2 479 aa6.84□□□□□ -1.31
HMGN1-218ENST00000490032 REC114Q7Z4M0 266 aa6.84□□□□□ -1.31
HMGN1-218ENST00000490032 GOLM1Q8NBJ4 401 aa6.84□□□□□ -1.31
HMGN1-218ENST00000490032 FAM13CQ8NE31 585 aa6.84□□□□□ -1.31
HMGN1-218ENST00000490032 Q96M66 194 aa6.84□□□□□ -1.31
HMGN1-218ENST00000490032 LRRC3Q9BY71 257 aa6.84□□□□□ -1.31
HMGN1-218ENST00000490032 CARS2Q9HA77 564 aaKnown RBP6.84□□□□□ -1.31
HMGN1-218ENST00000490032 REV1Q9UBZ9 1251 aa6.84□□□□□ -1.31
HMGN1-218ENST00000490032 ROBO2Q9HCK4 1378 aa6.83□□□□□ -1.32
HMGN1-218ENST00000490032 FAM168AQ92567 244 aa6.83□□□□□ -1.32
HMGN1-218ENST00000490032 COPRSQ9NQ92 184 aa6.83□□□□□ -1.32
HMGN1-218ENST00000490032 CTNND2Q9UQB3 1225 aa6.83□□□□□ -1.32
HMGN1-218ENST00000490032 GREM1O60565 184 aa6.82□□□□□ -1.32
HMGN1-218ENST00000490032 HTR3BO95264 441 aa6.82□□□□□ -1.32
HMGN1-218ENST00000490032 FBXL19Q6PCT2 694 aa6.82□□□□□ -1.32
HMGN1-218ENST00000490032 FBXO27Q8NI29 283 aa6.82□□□□□ -1.32
HMGN1-218ENST00000490032 TMEM40Q8WWA1 233 aa6.82□□□□□ -1.32
HMGN1-218ENST00000490032 UBE2FQ969M7 185 aa6.82□□□□□ -1.32
HMGN1-218ENST00000490032 GRIN3BO60391 1043 aa6.81□□□□□ -1.32
HMGN1-218ENST00000490032 SRFP11831 508 aa6.81□□□□□ -1.32
HMGN1-218ENST00000490032 YBX3P16989 372 aaKnown RBP eCLIP6.81□□□□□ -1.32
HMGN1-218ENST00000490032 EIF4A3P38919 411 aaKnown RBP6.81□□□□□ -1.32
HMGN1-218ENST00000490032 TMPRSS7Q7RTY8 843 aa6.81□□□□□ -1.32
HMGN1-218ENST00000490032 RNF141Q8WVD5 230 aa6.81□□□□□ -1.32
HMGN1-218ENST00000490032 DUSP15Q9H1R2 295 aaPredicted RBP6.81□□□□□ -1.32
HMGN1-218ENST00000490032 C19orf73Q9NVV2 129 aa6.81□□□□□ -1.32
HMGN1-218ENST00000490032 ZSWIM5Q9P217 1185 aa6.81□□□□□ -1.32
HMGN1-218ENST00000490032 SUPT16HQ9Y5B9 1047 aaKnown RBP6.81□□□□□ -1.32
HMGN1-218ENST00000490032 CHURC1-FNTBB4DL54 471 aa6.8□□□□□ -1.32
HMGN1-218ENST00000490032 DNAJA2O60884 412 aa6.8□□□□□ -1.32
HMGN1-218ENST00000490032 ESR1P03372 595 aa6.8□□□□□ -1.32
HMGN1-218ENST00000490032 LDLRAD1Q5T700 205 aa6.8□□□□□ -1.32
HMGN1-218ENST00000490032 TMCO4Q5TGY1 634 aa6.8□□□□□ -1.32
HMGN1-218ENST00000490032 GPR62Q9BZJ7 368 aa6.8□□□□□ -1.32
HMGN1-218ENST00000490032 BCL11AQ9H165 835 aa6.8□□□□□ -1.32
HMGN1-218ENST00000490032 ZBTB7CA1YPR0 619 aa6.79□□□□□ -1.32
HMGN1-218ENST00000490032 ATE1O95260 518 aa6.79□□□□□ -1.32
HMGN1-218ENST00000490032 ZNF16P17020 682 aaPredicted RBP6.79□□□□□ -1.32
HMGN1-218ENST00000490032 GDNFP39905 211 aa6.79□□□□□ -1.32
HMGN1-218ENST00000490032 AFMP43652 599 aa6.79□□□□□ -1.32
HMGN1-218ENST00000490032 CWF19L2Q2TBE0 894 aaKnown RBP6.79□□□□□ -1.32
HMGN1-218ENST00000490032 GAB4Q2WGN9 574 aa6.79□□□□□ -1.32
HMGN1-218ENST00000490032 HS2ST1Q7LGA3 356 aa6.79□□□□□ -1.32
HMGN1-218ENST00000490032 ZSWIM9Q86XI8 627 aa6.79□□□□□ -1.32
HMGN1-218ENST00000490032 DTWD2Q8NBA8 298 aa6.79□□□□□ -1.32
HMGN1-218ENST00000490032 CCDC74BQ96LY2 380 aa6.79□□□□□ -1.32
HMGN1-218ENST00000490032 KLHL3Q9UH77 587 aa6.79□□□□□ -1.32
HMGN1-218ENST00000490032 GGT7Q9UJ14 662 aa6.79□□□□□ -1.32
HMGN1-218ENST00000490032 TLR3O15455 904 aaKnown RBP6.78□□□□□ -1.32
HMGN1-218ENST00000490032 ZNF296Q8WUU4 475 aaPredicted RBP6.78□□□□□ -1.32
HMGN1-218ENST00000490032 CCDC120Q96HB5 630 aa6.78□□□□□ -1.32
HMGN1-218ENST00000490032 ALPK1Q96QP1 1244 aa6.78□□□□□ -1.32
HMGN1-218ENST00000490032 TRIT1Q9H3H1 467 aaKnown RBP6.78□□□□□ -1.32
HMGN1-218ENST00000490032 ADAMTS1Q9UHI8 967 aa6.78□□□□□ -1.32
HMGN1-218ENST00000490032 KCNH3Q9ULD8 1083 aa6.78□□□□□ -1.32
HMGN1-218ENST00000490032 WASH4PA8MWX3 477 aa6.77□□□□□ -1.33
HMGN1-218ENST00000490032 CRKP46108 304 aa6.77□□□□□ -1.33
HMGN1-218ENST00000490032 FYB2Q5VWT5 728 aa6.77□□□□□ -1.33
HMGN1-218ENST00000490032 BAHD1Q8TBE0 780 aaPredicted RBP6.77□□□□□ -1.33
HMGN1-218ENST00000490032 VWCEQ96DN2 955 aa6.77□□□□□ -1.33
HMGN1-218ENST00000490032 KREMEN1Q96MU8 473 aa6.77□□□□□ -1.33
HMGN1-218ENST00000490032 ASPNQ9BXN1 380 aa6.77□□□□□ -1.33
HMGN1-218ENST00000490032 BRMS1Q9HCU9 246 aa6.77□□□□□ -1.33
HMGN1-218ENST00000490032 ZNF503-AS2A6NEH8 195 aa6.76□□□□□ -1.33
HMGN1-218ENST00000490032 SLC22A31A6NKX4 558 aa6.76□□□□□ -1.33
HMGN1-218ENST00000490032 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.76□□□□□ -1.33
HMGN1-218ENST00000490032 C8AP07357 584 aa6.76□□□□□ -1.33
HMGN1-218ENST00000490032 TPP2P29144 1249 aaPredicted RBP6.76□□□□□ -1.33
HMGN1-218ENST00000490032 MLECQ14165 292 aa6.76□□□□□ -1.33
HMGN1-218ENST00000490032 KCNMB1Q16558 191 aa6.76□□□□□ -1.33
HMGN1-218ENST00000490032 TSPYL5Q86VY4 417 aaPredicted RBP6.76□□□□□ -1.33
HMGN1-218ENST00000490032 EHMT1Q9H9B1 1298 aa6.76□□□□□ -1.33
HMGN1-218ENST00000490032 GPATCH2Q9NW75 528 aa6.76□□□□□ -1.33
HMGN1-218ENST00000490032 PCDHB14Q9Y5E9 798 aa6.76□□□□□ -1.33
HMGN1-218ENST00000490032 RGS13O14921 159 aa6.75□□□□□ -1.33
HMGN1-218ENST00000490032 LRRN2O75325 713 aa6.75□□□□□ -1.33
HMGN1-218ENST00000490032 TNNI2P48788 182 aa6.75□□□□□ -1.33
HMGN1-218ENST00000490032 CREG2Q8IUH2 290 aa6.75□□□□□ -1.33
HMGN1-218ENST00000490032 PHACTR4Q8IZ21 702 aa6.75□□□□□ -1.33
HMGN1-218ENST00000490032 REXO1Q8N1G1 1221 aaKnown RBP6.75□□□□□ -1.33
HMGN1-218ENST00000490032 KIRREL1Q96J84 757 aa6.75□□□□□ -1.33
HMGN1-218ENST00000490032 KIF2CQ99661 725 aa6.75□□□□□ -1.33
HMGN1-218ENST00000490032 FAM53CQ9NYF3 392 aa6.75□□□□□ -1.33
HMGN1-218ENST00000490032 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.75□□□□□ -1.33
HMGN1-218ENST00000490032 SLAMF8Q9P0V8 285 aa6.75□□□□□ -1.33
HMGN1-218ENST00000490032 GMIPQ9P107 970 aa6.75□□□□□ -1.33
HMGN1-218ENST00000490032 DNAJC25-GNG10A0A024R161 153 aa6.74□□□□□ -1.33
HMGN1-218ENST00000490032 RBM47A0AV96 593 aaKnown RBP6.74□□□□□ -1.33
HMGN1-218ENST00000490032 FARP2O94887 1054 aaPredicted RBP6.74□□□□□ -1.33
HMGN1-218ENST00000490032 GLI1P08151 1106 aa6.74□□□□□ -1.33
HMGN1-218ENST00000490032 MFAP1P55081 439 aaKnown RBP6.74□□□□□ -1.33
HMGN1-218ENST00000490032 RALGPS1Q5JS13 557 aa6.74□□□□□ -1.33
HMGN1-218ENST00000490032 CDCP2Q5VXM1 449 aa6.74□□□□□ -1.33
HMGN1-218ENST00000490032 TMEM87AQ8NBN3 555 aa6.74□□□□□ -1.33
HMGN1-218ENST00000490032 NT5C1AQ9BXI3 368 aa6.74□□□□□ -1.33
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