RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 ZYXQ15942 572 aaKnown RBP23.5■■□□□ 1.35
TNFRSF1B-202ENST00000489921 KIAA1683Q9H0B3 1180 aa23.5■■□□□ 1.35
TNFRSF1B-202ENST00000489921 CRISPLD2Q9H0B8 497 aa23.5■■□□□ 1.35
TNFRSF1B-202ENST00000489921 ARMT1Q9H993 441 aa23.5■■□□□ 1.35
TNFRSF1B-202ENST00000489921 H0YGN5 161 aa23.49■■□□□ 1.35
TNFRSF1B-202ENST00000489921 PRKAB2O43741 272 aa23.49■■□□□ 1.35
TNFRSF1B-202ENST00000489921 CNMDO75829 334 aa23.49■■□□□ 1.35
TNFRSF1B-202ENST00000489921 ERVK-9P63128 1117 aa23.49■■□□□ 1.35
TNFRSF1B-202ENST00000489921 ERVK-24P63145 666 aa23.49■■□□□ 1.35
TNFRSF1B-202ENST00000489921 DEFB118Q96PH6 123 aa23.49■■□□□ 1.35
TNFRSF1B-202ENST00000489921 LRRCC1Q9C099 1032 aa23.49■■□□□ 1.35
TNFRSF1B-202ENST00000489921 PORCNQ9H237 461 aa23.49■■□□□ 1.35
TNFRSF1B-202ENST00000489921 SZT2Q5T011 3432 aa23.48■■□□□ 1.35
TNFRSF1B-202ENST00000489921 SMIM22K7EJ46 135 aa23.48■■□□□ 1.35
TNFRSF1B-202ENST00000489921 SEPT2Q15019 361 aa23.48■■□□□ 1.35
TNFRSF1B-202ENST00000489921 CATSPERGQ6ZRH7 1159 aa23.48■■□□□ 1.35
TNFRSF1B-202ENST00000489921 USP6NLQ92738 828 aa23.48■■□□□ 1.35
TNFRSF1B-202ENST00000489921 MYH8P13535 1937 aa23.47■■□□□ 1.35
TNFRSF1B-202ENST00000489921 RLFQ13129 1914 aa23.47■■□□□ 1.35
TNFRSF1B-202ENST00000489921 A0A1W2PRG0 241 aa23.47■■□□□ 1.35
TNFRSF1B-202ENST00000489921 USP17L15C9J2P7 530 aa23.47■■□□□ 1.35
TNFRSF1B-202ENST00000489921 USP17L13C9JLJ4 530 aa23.47■■□□□ 1.35
TNFRSF1B-202ENST00000489921 USP17L11C9JVI0 530 aa23.47■■□□□ 1.35
TNFRSF1B-202ENST00000489921 USP17L18D6R9N7 530 aa23.47■■□□□ 1.35
TNFRSF1B-202ENST00000489921 USP17L22D6RA61 530 aa23.47■■□□□ 1.35
TNFRSF1B-202ENST00000489921 USP17L17D6RBQ6 530 aa23.47■■□□□ 1.35
TNFRSF1B-202ENST00000489921 USP17L19D6RCP7 530 aa23.47■■□□□ 1.35
TNFRSF1B-202ENST00000489921 USP17L20D6RJB6 530 aa23.47■■□□□ 1.35
TNFRSF1B-202ENST00000489921 MBD4O95243 580 aa23.47■■□□□ 1.35
TNFRSF1B-202ENST00000489921 HMGCRP04035 888 aa23.47■■□□□ 1.35
TNFRSF1B-202ENST00000489921 VCAM1P19320 739 aa23.47■■□□□ 1.35
TNFRSF1B-202ENST00000489921 USP17L24Q0WX57 530 aa23.47■■□□□ 1.35
TNFRSF1B-202ENST00000489921 SLC44A5Q8NCS7 719 aa23.47■■□□□ 1.35
TNFRSF1B-202ENST00000489921 TRIB2Q92519 343 aa23.47■■□□□ 1.35
TNFRSF1B-202ENST00000489921 CABP5Q9NP86 173 aa23.47■■□□□ 1.35
TNFRSF1B-202ENST00000489921 FARP2O94887 1054 aaPredicted RBP23.46■■□□□ 1.35
TNFRSF1B-202ENST00000489921 USP14P54578 494 aa23.46■■□□□ 1.35
TNFRSF1B-202ENST00000489921 GTF3C2Q8WUA4 911 aaPredicted RBP23.46■■□□□ 1.35
TNFRSF1B-202ENST00000489921 DYNLL2Q96FJ2 89 aa23.46■■□□□ 1.35
TNFRSF1B-202ENST00000489921 FEZ1Q99689 392 aa23.46■■□□□ 1.35
TNFRSF1B-202ENST00000489921 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.46■■□□□ 1.35
TNFRSF1B-202ENST00000489921 DCTPP1Q9H773 170 aa23.46■■□□□ 1.35
TNFRSF1B-202ENST00000489921 COLQQ9Y215 455 aaPredicted RBP23.46■■□□□ 1.35
TNFRSF1B-202ENST00000489921 ALPK3Q96L96 1907 aa23.45■■□□□ 1.35
TNFRSF1B-202ENST00000489921 TFRCP02786 760 aaKnown RBP23.45■■□□□ 1.34
TNFRSF1B-202ENST00000489921 CYP2B6P20813 491 aa23.45■■□□□ 1.34
TNFRSF1B-202ENST00000489921 UBE3CQ15386 1083 aa23.45■■□□□ 1.34
TNFRSF1B-202ENST00000489921 MORN1Q5T089 497 aa23.45■■□□□ 1.34
TNFRSF1B-202ENST00000489921 SIAH1Q8IUQ4 282 aa23.45■■□□□ 1.34
TNFRSF1B-202ENST00000489921 PAGR1Q9BTK6 254 aa23.45■■□□□ 1.34
TNFRSF1B-202ENST00000489921 ATP8A2Q9NTI2 1148 aa23.45■■□□□ 1.34
TNFRSF1B-202ENST00000489921 RABGAP1Q9Y3P9 1069 aa23.45■■□□□ 1.34
TNFRSF1B-202ENST00000489921 XRCC5P13010 732 aaKnown RBP23.44■■□□□ 1.34
TNFRSF1B-202ENST00000489921 MAPK4P31152 587 aa23.44■■□□□ 1.34
TNFRSF1B-202ENST00000489921 KIAA1755Q5JYT7 1200 aa23.44■■□□□ 1.34
TNFRSF1B-202ENST00000489921 MAP3K21Q5TCX8 1036 aa23.44■■□□□ 1.34
TNFRSF1B-202ENST00000489921 LBX2Q6XYB7 198 aa23.44■■□□□ 1.34
TNFRSF1B-202ENST00000489921 GPR142Q7Z601 462 aa23.44■■□□□ 1.34
TNFRSF1B-202ENST00000489921 DPF3Q92784 378 aa23.44■■□□□ 1.34
TNFRSF1B-202ENST00000489921 NUDT12Q9BQG2 462 aa23.44■■□□□ 1.34
TNFRSF1B-202ENST00000489921 PUS7LQ9H0K6 701 aaKnown RBP23.44■■□□□ 1.34
TNFRSF1B-202ENST00000489921 RPTORQ8N122 1335 aa23.43■■□□□ 1.34
TNFRSF1B-202ENST00000489921 CYP2D7A0A087X1C5 515 aa23.43■■□□□ 1.34
TNFRSF1B-202ENST00000489921 CAPN2P17655 700 aa23.43■■□□□ 1.34
TNFRSF1B-202ENST00000489921 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.43■■□□□ 1.34
TNFRSF1B-202ENST00000489921 BTBD7Q9P203 1132 aa23.43■■□□□ 1.34
TNFRSF1B-202ENST00000489921 DNAH12Q6ZR08 3092 aa23.43■■□□□ 1.34
TNFRSF1B-202ENST00000489921 MNX1P50219 401 aaPredicted RBP23.42■■□□□ 1.34
TNFRSF1B-202ENST00000489921 C12orf60Q5U649 245 aa23.42■■□□□ 1.34
TNFRSF1B-202ENST00000489921 PLEKHH3Q7Z736 793 aa23.42■■□□□ 1.34
TNFRSF1B-202ENST00000489921 RPAP3Q9H6T3 665 aaPredicted RBP23.42■■□□□ 1.34
TNFRSF1B-202ENST00000489921 ECHDC1Q9NTX5 307 aa23.42■■□□□ 1.34
TNFRSF1B-202ENST00000489921 SPDYE16A6NNV3 312 aaPredicted RBP23.41■■□□□ 1.34
TNFRSF1B-202ENST00000489921 MPHOSPH10O00566 681 aaKnown RBP23.41■■□□□ 1.34
TNFRSF1B-202ENST00000489921 CCL14Q16627 93 aa23.41■■□□□ 1.34
TNFRSF1B-202ENST00000489921 DIS3LQ8TF46 1054 aaKnown RBP23.41■■□□□ 1.34
TNFRSF1B-202ENST00000489921 SOCS4Q8WXH5 440 aa23.41■■□□□ 1.34
TNFRSF1B-202ENST00000489921 HTATIP2Q9BUP3 242 aa23.41■■□□□ 1.34
TNFRSF1B-202ENST00000489921 HMX1Q9NP08 348 aaPredicted RBP23.41■■□□□ 1.34
TNFRSF1B-202ENST00000489921 SWAP70Q9UH65 585 aa23.41■■□□□ 1.34
TNFRSF1B-202ENST00000489921 A0A0G2JMZ2 1700 aa23.4■■□□□ 1.34
TNFRSF1B-202ENST00000489921 USP17L12C9JPN9 530 aa23.4■■□□□ 1.34
TNFRSF1B-202ENST00000489921 USP17L21D6R901 530 aa23.4■■□□□ 1.34
TNFRSF1B-202ENST00000489921 AKR1B1P15121 316 aa23.4■■□□□ 1.34
TNFRSF1B-202ENST00000489921 TMEM179Q6ZVK1 233 aa23.4■■□□□ 1.34
TNFRSF1B-202ENST00000489921 CLEC10AQ8IUN9 316 aa23.4■■□□□ 1.34
TNFRSF1B-202ENST00000489921 PAWRQ96IZ0 340 aaKnown RBP23.4■■□□□ 1.34
TNFRSF1B-202ENST00000489921 PCDHB15Q9Y5E8 787 aa23.4■■□□□ 1.34
TNFRSF1B-202ENST00000489921 PARP14Q460N5 1801 aa23.4■■□□□ 1.34
TNFRSF1B-202ENST00000489921 TRIOBPQ9H2D6 2365 aa23.4■■□□□ 1.34
TNFRSF1B-202ENST00000489921 CDK8P49336 464 aa23.39■■□□□ 1.33
TNFRSF1B-202ENST00000489921 FXR1P51114 621 aaKnown RBP eCLIP23.39■■□□□ 1.33
TNFRSF1B-202ENST00000489921 CACNB2Q08289 660 aaPredicted RBP23.39■■□□□ 1.33
TNFRSF1B-202ENST00000489921 TSHZ3Q63HK5 1081 aa23.39■■□□□ 1.33
TNFRSF1B-202ENST00000489921 CTR9Q6PD62 1173 aa23.39■■□□□ 1.33
TNFRSF1B-202ENST00000489921 C16orf86Q6ZW13 317 aa23.39■■□□□ 1.33
TNFRSF1B-202ENST00000489921 PRKAR2AP13861 404 aaKnown RBP23.38■■□□□ 1.33
TNFRSF1B-202ENST00000489921 STRBPQ96SI9 672 aaKnown RBP23.38■■□□□ 1.33
TNFRSF1B-202ENST00000489921 SLC4A4Q9Y6R1 1079 aa23.38■■□□□ 1.33
TNFRSF1B-202ENST00000489921 RGS2P41220 211 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms