RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 MPHOSPH10O00566 681 aaKnown RBP23.58■■□□□ 1.37
APTX-229ENST00000489583 HMMRO75330 724 aa23.58■■□□□ 1.37
APTX-229ENST00000489583 CEP85Q6P2H3 762 aa23.58■■□□□ 1.37
APTX-229ENST00000489583 CLASRPQ8N2M8 674 aaKnown RBP23.58■■□□□ 1.37
APTX-229ENST00000489583 EDC3Q96F86 508 aaKnown RBP23.58■■□□□ 1.37
APTX-229ENST00000489583 C12orf42Q96LP6 360 aa23.58■■□□□ 1.37
APTX-229ENST00000489583 KIAA1683Q9H0B3 1180 aa23.58■■□□□ 1.37
APTX-229ENST00000489583 BCL11AQ9H165 835 aa23.58■■□□□ 1.37
APTX-229ENST00000489583 PRO3102Q9H379 93 aa23.58■■□□□ 1.37
APTX-229ENST00000489583 ZMYND8Q9ULU4 1186 aaPredicted RBP23.58■■□□□ 1.37
APTX-229ENST00000489583 DOCK3Q8IZD9 2030 aa23.58■■□□□ 1.37
APTX-229ENST00000489583 IFIT2P09913 472 aaKnown RBP23.57■■□□□ 1.36
APTX-229ENST00000489583 SHROOM1Q2M3G4 852 aaPredicted RBP23.57■■□□□ 1.36
APTX-229ENST00000489583 Q3C1V9 767 aa23.57■■□□□ 1.36
APTX-229ENST00000489583 SLC9C2Q5TAH2 1124 aa23.57■■□□□ 1.36
APTX-229ENST00000489583 PORCNQ9H237 461 aa23.57■■□□□ 1.36
APTX-229ENST00000489583 PEX10O60683 326 aa23.56■■□□□ 1.36
APTX-229ENST00000489583 RLBP1P12271 317 aa23.56■■□□□ 1.36
APTX-229ENST00000489583 CACNB2Q08289 660 aaPredicted RBP23.56■■□□□ 1.36
APTX-229ENST00000489583 MAP2K5Q13163 448 aa23.56■■□□□ 1.36
APTX-229ENST00000489583 MAP3K21Q5TCX8 1036 aa23.56■■□□□ 1.36
APTX-229ENST00000489583 NDUFB9Q9Y6M9 179 aa23.56■■□□□ 1.36
APTX-229ENST00000489583 FOCADQ5VW36 1801 aa23.56■■□□□ 1.36
APTX-229ENST00000489583 ATP2B2Q01814 1243 aa23.55■■□□□ 1.36
APTX-229ENST00000489583 MORN1Q5T089 497 aa23.55■■□□□ 1.36
APTX-229ENST00000489583 CATSPERGQ6ZRH7 1159 aa23.55■■□□□ 1.36
APTX-229ENST00000489583 AMOTL1Q8IY63 956 aa23.55■■□□□ 1.36
APTX-229ENST00000489583 CHMP4BQ9H444 224 aaKnown RBP23.55■■□□□ 1.36
APTX-229ENST00000489583 ANTXR1Q9H6X2 564 aa23.55■■□□□ 1.36
APTX-229ENST00000489583 IL1RAPL2Q9NP60 686 aa23.55■■□□□ 1.36
APTX-229ENST00000489583 MCM9Q9NXL9 1143 aa23.55■■□□□ 1.36
APTX-229ENST00000489583 SIPA1L1O43166 1804 aa23.54■■□□□ 1.36
APTX-229ENST00000489583 SLC15A5A6NIM6 579 aa23.54■■□□□ 1.36
APTX-229ENST00000489583 APBB1O00213 710 aa23.54■■□□□ 1.36
APTX-229ENST00000489583 VCAM1P19320 739 aa23.54■■□□□ 1.36
APTX-229ENST00000489583 BMP8BP34820 402 aa23.54■■□□□ 1.36
APTX-229ENST00000489583 RHPN1Q8TCX5 695 aa23.54■■□□□ 1.36
APTX-229ENST00000489583 DDRGK1Q96HY6 314 aa23.54■■□□□ 1.36
APTX-229ENST00000489583 DNAJC2Q99543 621 aaKnown RBP23.54■■□□□ 1.36
APTX-229ENST00000489583 MYH1P12882 1939 aa23.53■■□□□ 1.36
APTX-229ENST00000489583 MSCO60682 206 aa23.53■■□□□ 1.36
APTX-229ENST00000489583 SYN1P17600 705 aa23.53■■□□□ 1.36
APTX-229ENST00000489583 CNGA1P29973 690 aa23.53■■□□□ 1.36
APTX-229ENST00000489583 USP6NLQ92738 828 aa23.53■■□□□ 1.36
APTX-229ENST00000489583 KIF1BPQ96EK5 621 aa23.53■■□□□ 1.36
APTX-229ENST00000489583 RPAP3Q9H6T3 665 aaPredicted RBP23.53■■□□□ 1.36
APTX-229ENST00000489583 HOXC10Q9NYD6 342 aa23.53■■□□□ 1.36
APTX-229ENST00000489583 CDK5RAP2Q96SN8 1893 aa23.53■■□□□ 1.36
APTX-229ENST00000489583 CCL14Q16627 93 aa23.52■■□□□ 1.36
APTX-229ENST00000489583 TANGO6Q9C0B7 1094 aa23.52■■□□□ 1.36
APTX-229ENST00000489583 UBE2OQ9C0C9 1292 aaKnown RBP23.52■■□□□ 1.36
APTX-229ENST00000489583 SLC5A4Q9NY91 659 aa23.52■■□□□ 1.36
APTX-229ENST00000489583 GOLIM4O00461 696 aa23.51■■□□□ 1.35
APTX-229ENST00000489583 PDE6AP16499 860 aa23.51■■□□□ 1.35
APTX-229ENST00000489583 CCND3P30281 292 aaPredicted RBP23.51■■□□□ 1.35
APTX-229ENST00000489583 PLCD1P51178 756 aa23.51■■□□□ 1.35
APTX-229ENST00000489583 DPP9Q86TI2 863 aa23.51■■□□□ 1.35
APTX-229ENST00000489583 PANK1Q8TE04 598 aa23.51■■□□□ 1.35
APTX-229ENST00000489583 GDF15Q99988 308 aa23.51■■□□□ 1.35
APTX-229ENST00000489583 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.51■■□□□ 1.35
APTX-229ENST00000489583 SH2D4AQ9H788 454 aa23.51■■□□□ 1.35
APTX-229ENST00000489583 RANBP2P49792 3224 aaKnown RBP23.5■■□□□ 1.35
APTX-229ENST00000489583 PTPREP23469 700 aa23.5■■□□□ 1.35
APTX-229ENST00000489583 SHMT1P34896 483 aa23.5■■□□□ 1.35
APTX-229ENST00000489583 COG2Q14746 738 aa23.5■■□□□ 1.35
APTX-229ENST00000489583 LBX2Q6XYB7 198 aa23.5■■□□□ 1.35
APTX-229ENST00000489583 RPAP2Q8IXW5 612 aaPredicted RBP23.5■■□□□ 1.35
APTX-229ENST00000489583 SLC17A8Q8NDX2 589 aa23.5■■□□□ 1.35
APTX-229ENST00000489583 ACER1Q8TDN7 264 aa23.5■■□□□ 1.35
APTX-229ENST00000489583 RIOK1Q9BRS2 568 aaKnown RBP23.5■■□□□ 1.35
APTX-229ENST00000489583 SWAP70Q9UH65 585 aa23.5■■□□□ 1.35
APTX-229ENST00000489583 MYO5AQ9Y4I1 1855 aaKnown RBP23.49■■□□□ 1.35
APTX-229ENST00000489583 MAGEA10P43363 369 aaPredicted RBP23.49■■□□□ 1.35
APTX-229ENST00000489583 SEPT2Q15019 361 aa23.49■■□□□ 1.35
APTX-229ENST00000489583 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.49■■□□□ 1.35
APTX-229ENST00000489583 ARHGEF10LQ9HCE6 1279 aa23.49■■□□□ 1.35
APTX-229ENST00000489583 PRKAG2Q9UGJ0 569 aa23.49■■□□□ 1.35
APTX-229ENST00000489583 ZNF532Q9HCE3 1301 aa23.49■■□□□ 1.35
APTX-229ENST00000489583 DDX60LQ5H9U9 1706 aaKnown RBP23.48■■□□□ 1.35
APTX-229ENST00000489583 STRNO43815 780 aa23.48■■□□□ 1.35
APTX-229ENST00000489583 RAB11FIP3O75154 756 aa23.48■■□□□ 1.35
APTX-229ENST00000489583 TMEM179Q6ZVK1 233 aa23.48■■□□□ 1.35
APTX-229ENST00000489583 TDHQ8IZJ6 230 aa23.48■■□□□ 1.35
APTX-229ENST00000489583 LRCH3Q96II8 777 aa23.48■■□□□ 1.35
APTX-229ENST00000489583 LBHD1Q9BQE6 289 aaPredicted RBP23.48■■□□□ 1.35
APTX-229ENST00000489583 DDX19BQ9UMR2 479 aa23.48■■□□□ 1.35
APTX-229ENST00000489583 CNMDO75829 334 aa23.47■■□□□ 1.35
APTX-229ENST00000489583 MNX1P50219 401 aaPredicted RBP23.47■■□□□ 1.35
APTX-229ENST00000489583 GPR153Q6NV75 609 aa23.47■■□□□ 1.35
APTX-229ENST00000489583 MB21D1Q8N884 522 aa23.47■■□□□ 1.35
APTX-229ENST00000489583 PLXNB2O15031 1838 aa23.47■■□□□ 1.35
APTX-229ENST00000489583 SPDYE16A6NNV3 312 aaPredicted RBP23.46■■□□□ 1.35
APTX-229ENST00000489583 PFASO15067 1338 aa23.46■■□□□ 1.35
APTX-229ENST00000489583 GRB14Q14449 540 aa23.46■■□□□ 1.35
APTX-229ENST00000489583 PLS1Q14651 629 aa23.46■■□□□ 1.35
APTX-229ENST00000489583 LHX8Q68G74 356 aa23.46■■□□□ 1.35
APTX-229ENST00000489583 ZBED9Q6R2W3 1325 aa23.46■■□□□ 1.35
APTX-229ENST00000489583 LPAR1Q92633 364 aa23.46■■□□□ 1.35
APTX-229ENST00000489583 SENP6Q9GZR1 1112 aaPredicted RBP23.46■■□□□ 1.35
APTX-229ENST00000489583 BTBD7Q9P203 1132 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms