RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 TCRBV5S4A2TA0A5A2 114 aa14.32□□□□□ -0.12
ACTN4-206ENST00000489451 USP5P45974 858 aa14.32□□□□□ -0.12
ACTN4-206ENST00000489451 ERVK-9P63128 1117 aa14.32□□□□□ -0.12
ACTN4-206ENST00000489451 ERVK-24P63145 666 aa14.32□□□□□ -0.12
ACTN4-206ENST00000489451 GABPAQ06546 454 aa14.32□□□□□ -0.12
ACTN4-206ENST00000489451 CCL14Q16627 93 aa14.32□□□□□ -0.12
ACTN4-206ENST00000489451 SLFNL1Q499Z3 407 aa14.32□□□□□ -0.12
ACTN4-206ENST00000489451 MORN1Q5T089 497 aa14.32□□□□□ -0.12
ACTN4-206ENST00000489451 USP17L2Q6R6M4 530 aa14.32□□□□□ -0.12
ACTN4-206ENST00000489451 GPRC5AQ8NFJ5 357 aa14.32□□□□□ -0.12
ACTN4-206ENST00000489451 EDC3Q96F86 508 aaKnown RBP14.32□□□□□ -0.12
ACTN4-206ENST00000489451 SERPINB13Q9UIV8 391 aa14.32□□□□□ -0.12
ACTN4-206ENST00000489451 A0A0G2JMZ2 1700 aa14.32□□□□□ -0.12
ACTN4-206ENST00000489451 CHGBP05060 677 aa14.31□□□□□ -0.12
ACTN4-206ENST00000489451 PDE6AP16499 860 aa14.31□□□□□ -0.12
ACTN4-206ENST00000489451 ZYXQ15942 572 aaKnown RBP14.31□□□□□ -0.12
ACTN4-206ENST00000489451 GPR142Q7Z601 462 aa14.31□□□□□ -0.12
ACTN4-206ENST00000489451 ERC1Q8IUD2 1116 aa14.31□□□□□ -0.12
ACTN4-206ENST00000489451 TRIM34Q9BYJ4 488 aa14.31□□□□□ -0.12
ACTN4-206ENST00000489451 RAPGEFL1Q9UHV5 662 aa14.31□□□□□ -0.12
ACTN4-206ENST00000489451 OGDHLQ9ULD0 1010 aa14.31□□□□□ -0.12
ACTN4-206ENST00000489451 BAZ2AQ9UIF9 1905 aaKnown RBP14.31□□□□□ -0.12
ACTN4-206ENST00000489451 VCANP13611 3396 aa14.3□□□□□ -0.12
ACTN4-206ENST00000489451 PARP14Q460N5 1801 aa14.3□□□□□ -0.12
ACTN4-206ENST00000489451 SMIM22K7EJ46 135 aa14.3□□□□□ -0.12
ACTN4-206ENST00000489451 XRCC5P13010 732 aaKnown RBP14.3□□□□□ -0.12
ACTN4-206ENST00000489451 PRKAR2AP13861 404 aaKnown RBP14.3□□□□□ -0.12
ACTN4-206ENST00000489451 VCAM1P19320 739 aa14.3□□□□□ -0.12
ACTN4-206ENST00000489451 MAP3K12Q12852 859 aa14.3□□□□□ -0.12
ACTN4-206ENST00000489451 SOCS4Q8WXH5 440 aa14.3□□□□□ -0.12
ACTN4-206ENST00000489451 NUDT12Q9BQG2 462 aa14.3□□□□□ -0.12
ACTN4-206ENST00000489451 PAGR1Q9BTK6 254 aa14.3□□□□□ -0.12
ACTN4-206ENST00000489451 KIAA1683Q9H0B3 1180 aa14.3□□□□□ -0.12
ACTN4-206ENST00000489451 HMX1Q9NP08 348 aaPredicted RBP14.3□□□□□ -0.12
ACTN4-206ENST00000489451 ZBTB40Q9NUA8 1239 aa14.3□□□□□ -0.12
ACTN4-206ENST00000489451 PFASO15067 1338 aa14.3□□□□□ -0.12
ACTN4-206ENST00000489451 MYH7P12883 1935 aa14.29□□□□□ -0.12
ACTN4-206ENST00000489451 A0A1W2PRG0 241 aa14.29□□□□□ -0.12
ACTN4-206ENST00000489451 CYP2D6P10635 497 aa14.29□□□□□ -0.12
ACTN4-206ENST00000489451 CAPN2P17655 700 aa14.29□□□□□ -0.12
ACTN4-206ENST00000489451 BMP8BP34820 402 aa14.29□□□□□ -0.12
ACTN4-206ENST00000489451 CACNB2Q08289 660 aaPredicted RBP14.29□□□□□ -0.12
ACTN4-206ENST00000489451 RAB3GAP1Q15042 981 aa14.29□□□□□ -0.12
ACTN4-206ENST00000489451 ABCB5Q2M3G0 1257 aa14.29□□□□□ -0.12
ACTN4-206ENST00000489451 LRIT3Q3SXY7 679 aa14.29□□□□□ -0.12
ACTN4-206ENST00000489451 CERKLQ49MI3 558 aaPredicted RBP14.29□□□□□ -0.12
ACTN4-206ENST00000489451 KIAA1755Q5JYT7 1200 aa14.29□□□□□ -0.12
ACTN4-206ENST00000489451 CATSPERGQ6ZRH7 1159 aa14.29□□□□□ -0.12
ACTN4-206ENST00000489451 NECAB2Q7Z6G3 386 aa14.29□□□□□ -0.12
ACTN4-206ENST00000489451 CERS3Q8IU89 383 aa14.29□□□□□ -0.12
ACTN4-206ENST00000489451 LCORLQ8N3X6 602 aa14.29□□□□□ -0.12
ACTN4-206ENST00000489451 ANKLE1Q8NAG6 615 aa14.29□□□□□ -0.12
ACTN4-206ENST00000489451 SLC44A5Q8NCS7 719 aa14.29□□□□□ -0.12
ACTN4-206ENST00000489451 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.29□□□□□ -0.12
ACTN4-206ENST00000489451 SDR42E1Q8WUS8 393 aa14.29□□□□□ -0.12
ACTN4-206ENST00000489451 FLRT1Q9NZU1 646 aa14.29□□□□□ -0.12
ACTN4-206ENST00000489451 BTBD7Q9P203 1132 aa14.29□□□□□ -0.12
ACTN4-206ENST00000489451 COG6Q9Y2V7 657 aa14.29□□□□□ -0.12
ACTN4-206ENST00000489451 ZNF532Q9HCE3 1301 aa14.29□□□□□ -0.12
ACTN4-206ENST00000489451 MYH8P13535 1937 aa14.29□□□□□ -0.12
ACTN4-206ENST00000489451 MAGEB6P1A0A0J9YX57 407 aa14.28□□□□□ -0.12
ACTN4-206ENST00000489451 APBB1O00213 710 aa14.28□□□□□ -0.12
ACTN4-206ENST00000489451 GOLIM4O00461 696 aa14.28□□□□□ -0.12
ACTN4-206ENST00000489451 CCND3P30281 292 aaPredicted RBP14.28□□□□□ -0.12
ACTN4-206ENST00000489451 MAPK4P31152 587 aa14.28□□□□□ -0.12
ACTN4-206ENST00000489451 SEPT2Q15019 361 aa14.28□□□□□ -0.12
ACTN4-206ENST00000489451 SLC9C2Q5TAH2 1124 aa14.28□□□□□ -0.12
ACTN4-206ENST00000489451 LHX8Q68G74 356 aa14.28□□□□□ -0.12
ACTN4-206ENST00000489451 TMED8Q6PL24 325 aaPredicted RBP14.28□□□□□ -0.12
ACTN4-206ENST00000489451 LBX2Q6XYB7 198 aa14.28□□□□□ -0.12
ACTN4-206ENST00000489451 TTC6Q86TZ1 520 aa14.28□□□□□ -0.12
ACTN4-206ENST00000489451 KIF1BPQ96EK5 621 aa14.28□□□□□ -0.12
ACTN4-206ENST00000489451 DCP1AQ9NPI6 582 aaPredicted RBP14.28□□□□□ -0.12
ACTN4-206ENST00000489451 SPTBN5Q9NRC6 3674 aaKnown RBP14.28□□□□□ -0.12
ACTN4-206ENST00000489451 ZNF236Q9UL36 1845 aa14.27□□□□□ -0.12
ACTN4-206ENST00000489451 SPDYE16A6NNV3 312 aaPredicted RBP14.27□□□□□ -0.13
ACTN4-206ENST00000489451 USP17L15C9J2P7 530 aa14.27□□□□□ -0.13
ACTN4-206ENST00000489451 USP17L13C9JLJ4 530 aa14.27□□□□□ -0.13
ACTN4-206ENST00000489451 USP17L11C9JVI0 530 aa14.27□□□□□ -0.13
ACTN4-206ENST00000489451 USP17L18D6R9N7 530 aa14.27□□□□□ -0.13
ACTN4-206ENST00000489451 USP17L22D6RA61 530 aa14.27□□□□□ -0.13
ACTN4-206ENST00000489451 USP17L17D6RBQ6 530 aa14.27□□□□□ -0.13
ACTN4-206ENST00000489451 USP17L19D6RCP7 530 aa14.27□□□□□ -0.13
ACTN4-206ENST00000489451 USP17L20D6RJB6 530 aa14.27□□□□□ -0.13
ACTN4-206ENST00000489451 IGHA2P01877 340 aa14.27□□□□□ -0.13
ACTN4-206ENST00000489451 USP17L24Q0WX57 530 aa14.27□□□□□ -0.13
ACTN4-206ENST00000489451 PLEKHH3Q7Z736 793 aa14.27□□□□□ -0.13
ACTN4-206ENST00000489451 C7orf61Q8IZ16 206 aa14.27□□□□□ -0.13
ACTN4-206ENST00000489451 GTF3C2Q8WUA4 911 aaPredicted RBP14.27□□□□□ -0.13
ACTN4-206ENST00000489451 DNAJC2Q99543 621 aaKnown RBP14.27□□□□□ -0.13
ACTN4-206ENST00000489451 FEZ1Q99689 392 aa14.27□□□□□ -0.13
ACTN4-206ENST00000489451 APBA2Q99767 749 aa14.27□□□□□ -0.13
ACTN4-206ENST00000489451 GDF15Q99988 308 aa14.27□□□□□ -0.13
ACTN4-206ENST00000489451 RABGAP1Q9Y3P9 1069 aa14.27□□□□□ -0.13
ACTN4-206ENST00000489451 PRKAB2O43741 272 aa14.26□□□□□ -0.13
ACTN4-206ENST00000489451 COL6A1P12109 1028 aa14.26□□□□□ -0.13
ACTN4-206ENST00000489451 ZKSCAN1P17029 563 aaPredicted RBP14.26□□□□□ -0.13
ACTN4-206ENST00000489451 TTF1Q15361 905 aaPredicted RBP14.26□□□□□ -0.13
ACTN4-206ENST00000489451 HSP90AB4PQ58FF6 505 aa14.26□□□□□ -0.13
ACTN4-206ENST00000489451 CLEC10AQ8IUN9 316 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms