RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 IGHA2P01877 340 aa18.86■□□□□ 0.61
UFD1-209ENST00000489406 BTDP43251 543 aa18.86■□□□□ 0.61
UFD1-209ENST00000489406 GRB14Q14449 540 aa18.86■□□□□ 0.61
UFD1-209ENST00000489406 PRAMEF19Q5SWL8 479 aa18.86■□□□□ 0.61
UFD1-209ENST00000489406 CCDC174Q6PII3 467 aa18.86■□□□□ 0.61
UFD1-209ENST00000489406 YBX2Q9Y2T7 364 aaKnown RBP18.86■□□□□ 0.61
UFD1-209ENST00000489406 RABGAP1Q9Y3P9 1069 aa18.86■□□□□ 0.61
UFD1-209ENST00000489406 MYH2Q9UKX2 1941 aa18.86■□□□□ 0.61
UFD1-209ENST00000489406 LRRC37A2A6NM11 1700 aa18.86■□□□□ 0.61
UFD1-209ENST00000489406 C19orf81C9J6K1 198 aa18.85■□□□□ 0.61
UFD1-209ENST00000489406 ACRP10323 421 aa18.85■□□□□ 0.61
UFD1-209ENST00000489406 PPIGQ13427 754 aaKnown RBP eCLIP18.85■□□□□ 0.611e-6■■■■□ 23.8
UFD1-209ENST00000489406 MFSD5Q6N075 450 aa18.85■□□□□ 0.61
UFD1-209ENST00000489406 KLHDC4Q8TBB5 520 aa18.85■□□□□ 0.61
UFD1-209ENST00000489406 FBXL18Q96ME1 805 aa18.85■□□□□ 0.61
UFD1-209ENST00000489406 CD320Q9NPF0 282 aa18.85■□□□□ 0.61
UFD1-209ENST00000489406 SALL1Q9NSC2 1324 aa18.84■□□□□ 0.61
UFD1-209ENST00000489406 USP17L10C9JJH3 530 aa18.84■□□□□ 0.61
UFD1-209ENST00000489406 SLC5A1P13866 664 aa18.84■□□□□ 0.61
UFD1-209ENST00000489406 ZNF365Q70YC5 407 aa18.84■□□□□ 0.61
UFD1-209ENST00000489406 DPP9Q86TI2 863 aa18.84■□□□□ 0.61
UFD1-209ENST00000489406 DCDC2CA8MYV0 355 aa18.83■□□□□ 0.6
UFD1-209ENST00000489406 JAG1P78504 1218 aa18.83■□□□□ 0.6
UFD1-209ENST00000489406 OLFML2BQ68BL8 750 aa18.83■□□□□ 0.6
UFD1-209ENST00000489406 COG5Q9UP83 839 aa18.83■□□□□ 0.6
UFD1-209ENST00000489406 A0A1W2PQ45 241 aaPredicted RBP18.82■□□□□ 0.6
UFD1-209ENST00000489406 A0A1W2PQY0 241 aa18.82■□□□□ 0.6
UFD1-209ENST00000489406 CSF2RAP15509 400 aa18.82■□□□□ 0.6
UFD1-209ENST00000489406 DZIP1Q86YF9 867 aaKnown RBP18.82■□□□□ 0.6
UFD1-209ENST00000489406 LPIN2Q92539 896 aa18.82■□□□□ 0.6
UFD1-209ENST00000489406 EMILIN3Q9NT22 766 aa18.82■□□□□ 0.6
UFD1-209ENST00000489406 PRRC2BQ5JSZ5 2229 aaKnown RBP18.81■□□□□ 0.6
UFD1-209ENST00000489406 ASNSP08243 561 aa18.81■□□□□ 0.6
UFD1-209ENST00000489406 RHBDL3P58872 404 aa18.81■□□□□ 0.6
UFD1-209ENST00000489406 PPP2R2DQ66LE6 453 aa18.81■□□□□ 0.6
UFD1-209ENST00000489406 ANKRD33Q7Z3H0 272 aa18.81■□□□□ 0.6
UFD1-209ENST00000489406 TOX2Q96NM4 488 aa18.81■□□□□ 0.6
UFD1-209ENST00000489406 BICC1Q9H694 974 aaKnown RBP18.81■□□□□ 0.6
UFD1-209ENST00000489406 XPNPEP3Q9NQH7 507 aa18.81■□□□□ 0.6
UFD1-209ENST00000489406 GNL3LQ9NVN8 582 aaKnown RBP18.81■□□□□ 0.6
UFD1-209ENST00000489406 APBB1O00213 710 aa18.8■□□□□ 0.6
UFD1-209ENST00000489406 RFXAPO00287 272 aa18.8■□□□□ 0.6
UFD1-209ENST00000489406 PGK1P00558 417 aa18.8■□□□□ 0.6
UFD1-209ENST00000489406 RALBP1Q15311 655 aa18.8■□□□□ 0.6
UFD1-209ENST00000489406 SHROOM1Q2M3G4 852 aaPredicted RBP18.8■□□□□ 0.6
UFD1-209ENST00000489406 PSRC1Q6PGN9 363 aaPredicted RBP18.8■□□□□ 0.6
UFD1-209ENST00000489406 RNF180Q86T96 592 aa18.8■□□□□ 0.6
UFD1-209ENST00000489406 SLF2Q8IX21 1173 aa18.8■□□□□ 0.6
UFD1-209ENST00000489406 FAM163AQ96GL9 167 aaPredicted RBP18.8■□□□□ 0.6
UFD1-209ENST00000489406 BTBD7Q9P203 1132 aa18.8■□□□□ 0.6
UFD1-209ENST00000489406 TBX21Q9UL17 535 aa18.8■□□□□ 0.6
UFD1-209ENST00000489406 MTCH2Q9Y6C9 303 aa18.8■□□□□ 0.6
UFD1-209ENST00000489406 GBF1Q92538 1859 aa18.8■□□□□ 0.6
UFD1-209ENST00000489406 NPM3O75607 178 aaKnown RBP18.79■□□□□ 0.6
UFD1-209ENST00000489406 NBPF7P0C2Y1 421 aaPredicted RBP18.79■□□□□ 0.6
UFD1-209ENST00000489406 ADORA2AP29274 412 aa18.79■□□□□ 0.6
UFD1-209ENST00000489406 RABGGTBP53611 331 aa18.79■□□□□ 0.6
UFD1-209ENST00000489406 CSPP1Q1MSJ5 1256 aa18.79■□□□□ 0.6
UFD1-209ENST00000489406 HLA-CQ95604 372 aa18.79■□□□□ 0.6
UFD1-209ENST00000489406 ABCF2Q9UG63 623 aa18.79■□□□□ 0.6
UFD1-209ENST00000489406 HERC5Q9UII4 1024 aaKnown RBP18.79■□□□□ 0.6
UFD1-209ENST00000489406 DENND2AQ9ULE3 1009 aa18.79■□□□□ 0.6
UFD1-209ENST00000489406 WDFY4Q6ZS81 3184 aa18.79■□□□□ 0.6
UFD1-209ENST00000489406 MROH7-TTC4A0A0A0MT08 1334 aa18.78■□□□□ 0.6
UFD1-209ENST00000489406 GTPBP6O43824 516 aaPredicted RBP18.78■□□□□ 0.6
UFD1-209ENST00000489406 MYOGP15173 224 aa18.78■□□□□ 0.6
UFD1-209ENST00000489406 USP17L2Q6R6M4 530 aa18.78■□□□□ 0.6
UFD1-209ENST00000489406 TMEM199Q8N511 208 aa18.78■□□□□ 0.6
UFD1-209ENST00000489406 USP17L15C9J2P7 530 aa18.77■□□□□ 0.6
UFD1-209ENST00000489406 USP17L13C9JLJ4 530 aa18.77■□□□□ 0.6
UFD1-209ENST00000489406 USP17L11C9JVI0 530 aa18.77■□□□□ 0.6
UFD1-209ENST00000489406 USP17L18D6R9N7 530 aa18.77■□□□□ 0.6
UFD1-209ENST00000489406 USP17L22D6RA61 530 aa18.77■□□□□ 0.6
UFD1-209ENST00000489406 USP17L17D6RBQ6 530 aa18.77■□□□□ 0.6
UFD1-209ENST00000489406 USP17L19D6RCP7 530 aa18.77■□□□□ 0.6
UFD1-209ENST00000489406 USP17L20D6RJB6 530 aa18.77■□□□□ 0.6
UFD1-209ENST00000489406 RARBP10826 455 aa18.77■□□□□ 0.6
UFD1-209ENST00000489406 USP17L24Q0WX57 530 aa18.77■□□□□ 0.6
UFD1-209ENST00000489406 RABL6Q3YEC7 729 aaPredicted RBP18.77■□□□□ 0.6
UFD1-209ENST00000489406 KRT40Q6A162 431 aa18.77■□□□□ 0.6
UFD1-209ENST00000489406 ZGPATQ8N5A5 531 aaKnown RBP18.77■□□□□ 0.6
UFD1-209ENST00000489406 ANKRD44Q8N8A2 993 aa18.77■□□□□ 0.6
UFD1-209ENST00000489406 PPP1R12CQ9BZL4 782 aa18.77■□□□□ 0.6
UFD1-209ENST00000489406 KCNH6Q9H252 994 aa18.77■□□□□ 0.6
UFD1-209ENST00000489406 STARD7Q9NQZ5 370 aa18.77■□□□□ 0.6
UFD1-209ENST00000489406 TRANK1O15050 2925 aa18.77■□□□□ 0.6
UFD1-209ENST00000489406 ZNF521Q96K83 1311 aa18.76■□□□□ 0.59
UFD1-209ENST00000489406 GPR75-ASB3A0A0A6YYF3 556 aa18.76■□□□□ 0.59
UFD1-209ENST00000489406 COBLO75128 1261 aa18.76■□□□□ 0.59
UFD1-209ENST00000489406 ALDH1L1O75891 902 aa18.76■□□□□ 0.59
UFD1-209ENST00000489406 GDF11O95390 407 aa18.76■□□□□ 0.59
UFD1-209ENST00000489406 POU3F3P20264 500 aaPredicted RBP18.76■□□□□ 0.59
UFD1-209ENST00000489406 PHKA1P46020 1223 aa18.76■□□□□ 0.59
UFD1-209ENST00000489406 SLC4A10Q6U841 1118 aa18.76■□□□□ 0.59
UFD1-209ENST00000489406 PHOX2BQ99453 314 aa18.76■□□□□ 0.59
UFD1-209ENST00000489406 ZYXQ15942 572 aaKnown RBP18.75■□□□□ 0.59
UFD1-209ENST00000489406 SRCIN1Q9C0H9 1055 aa18.75■□□□□ 0.59
UFD1-209ENST00000489406 MTIF3Q9H2K0 278 aaKnown RBP18.75■□□□□ 0.59
UFD1-209ENST00000489406 SMCHD1A6NHR9 2005 aa18.74■□□□□ 0.59
UFD1-209ENST00000489406 SEMA3EO15041 775 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms