RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 NPLOC4Q8TAT6 608 aa14.45□□□□□ -0.1
HDAC6-233ENST00000489352 RABGAP1Q9Y3P9 1069 aa14.45□□□□□ -0.1
HDAC6-233ENST00000489352 KIF16BQ96L93 1317 aa14.44□□□□□ -0.1
HDAC6-233ENST00000489352 ZDBF2Q9HCK1 2354 aa14.44□□□□□ -0.1
HDAC6-233ENST00000489352 USP17L10C9JJH3 530 aa14.44□□□□□ -0.1
HDAC6-233ENST00000489352 GRM8O00222 908 aa14.44□□□□□ -0.1
HDAC6-233ENST00000489352 HOXC6P09630 235 aa14.44□□□□□ -0.1
HDAC6-233ENST00000489352 ALADP13716 330 aa14.44□□□□□ -0.1
HDAC6-233ENST00000489352 PUM3Q15397 648 aaKnown RBP14.44□□□□□ -0.1
HDAC6-233ENST00000489352 WDR18Q9BV38 432 aa14.44□□□□□ -0.1
HDAC6-233ENST00000489352 GNL3LQ9NVN8 582 aaKnown RBP14.44□□□□□ -0.1
HDAC6-233ENST00000489352 PHF24Q9UPV7 400 aa14.44□□□□□ -0.1
HDAC6-233ENST00000489352 SLC5A1P13866 664 aa14.43□□□□□ -0.1
HDAC6-233ENST00000489352 FAAP100Q0VG06 881 aa14.43□□□□□ -0.1
HDAC6-233ENST00000489352 ZNF365Q70YC5 407 aa14.43□□□□□ -0.1
HDAC6-233ENST00000489352 DZIP1Q86YF9 867 aaKnown RBP14.43□□□□□ -0.1
HDAC6-233ENST00000489352 TOX2Q96NM4 488 aa14.43□□□□□ -0.1
HDAC6-233ENST00000489352 XPNPEP3Q9NQH7 507 aa14.43□□□□□ -0.1
HDAC6-233ENST00000489352 DDX4Q9NQI0 724 aaKnown RBP14.43□□□□□ -0.1
HDAC6-233ENST00000489352 SLC5A4Q9NY91 659 aa14.43□□□□□ -0.1
HDAC6-233ENST00000489352 ASNSP08243 561 aa14.42□□□□□ -0.1
HDAC6-233ENST00000489352 ACRP10323 421 aa14.42□□□□□ -0.1
HDAC6-233ENST00000489352 RARBP10826 455 aa14.42□□□□□ -0.1
HDAC6-233ENST00000489352 CSF2RAP15509 400 aa14.42□□□□□ -0.1
HDAC6-233ENST00000489352 GRB14Q14449 540 aa14.42□□□□□ -0.1
HDAC6-233ENST00000489352 TWISTNBQ3B726 338 aaPredicted RBP14.42□□□□□ -0.1
HDAC6-233ENST00000489352 LRRC24Q50LG9 513 aa14.42□□□□□ -0.1
HDAC6-233ENST00000489352 FAM47AQ5JRC9 791 aa14.42□□□□□ -0.1
HDAC6-233ENST00000489352 RASIP1Q5U651 963 aa14.42□□□□□ -0.1
HDAC6-233ENST00000489352 OLFML2BQ68BL8 750 aa14.42□□□□□ -0.1
HDAC6-233ENST00000489352 ZGPATQ8N5A5 531 aaKnown RBP14.42□□□□□ -0.1
HDAC6-233ENST00000489352 NUP133Q8WUM0 1156 aa14.42□□□□□ -0.1
HDAC6-233ENST00000489352 ZNF521Q96K83 1311 aa14.41□□□□□ -0.1
HDAC6-233ENST00000489352 USP34Q70CQ2 3546 aa14.41□□□□□ -0.1
HDAC6-233ENST00000489352 A0A1W2PQ45 241 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-233ENST00000489352 A0A1W2PQY0 241 aa14.41□□□□□ -0.1
HDAC6-233ENST00000489352 SSTR3P32745 418 aaPredicted RBP14.41□□□□□ -0.1
HDAC6-233ENST00000489352 C16orf59Q7L2K0 433 aa14.41□□□□□ -0.1
HDAC6-233ENST00000489352 ANKRD33Q7Z3H0 272 aa14.41□□□□□ -0.1
HDAC6-233ENST00000489352 STARD7Q9NQZ5 370 aa14.41□□□□□ -0.1
HDAC6-233ENST00000489352 FGBP02675 491 aa14.4□□□□□ -0.1
HDAC6-233ENST00000489352 BTDP43251 543 aa14.4□□□□□ -0.1
HDAC6-233ENST00000489352 TRIM34Q9BYJ4 488 aa14.4□□□□□ -0.1
HDAC6-233ENST00000489352 HERC5Q9UII4 1024 aaKnown RBP14.4□□□□□ -0.1
HDAC6-233ENST00000489352 YBX2Q9Y2T7 364 aaKnown RBP14.4□□□□□ -0.1
HDAC6-233ENST00000489352 MTCH2Q9Y6C9 303 aa14.4□□□□□ -0.1
HDAC6-233ENST00000489352 CFAP54Q96N23 3096 aa14.4□□□□□ -0.1
HDAC6-233ENST00000489352 MROH7Q68CQ1 1323 aa14.4□□□□□ -0.1
HDAC6-233ENST00000489352 SPTBN4Q9H254 2564 aa14.39□□□□□ -0.11
HDAC6-233ENST00000489352 STRNO43815 780 aa14.39□□□□□ -0.11
HDAC6-233ENST00000489352 PRAMEF19Q5SWL8 479 aa14.39□□□□□ -0.11
HDAC6-233ENST00000489352 BEND3Q5T5X7 828 aa14.39□□□□□ -0.11
HDAC6-233ENST00000489352 USP17L2Q6R6M4 530 aa14.39□□□□□ -0.11
HDAC6-233ENST00000489352 GJD3Q8N144 294 aa14.39□□□□□ -0.11
HDAC6-233ENST00000489352 VGLL2Q8N8G2 317 aa14.39□□□□□ -0.11
HDAC6-233ENST00000489352 CCER1Q8TC90 406 aaPredicted RBP14.39□□□□□ -0.11
HDAC6-233ENST00000489352 LPIN2Q92539 896 aa14.39□□□□□ -0.11
HDAC6-233ENST00000489352 DENND2AQ9ULE3 1009 aa14.39□□□□□ -0.11
HDAC6-233ENST00000489352 GAKO14976 1311 aa14.39□□□□□ -0.11
HDAC6-233ENST00000489352 RFX7Q2KHR2 1363 aa14.38□□□□□ -0.11
HDAC6-233ENST00000489352 USP17L15C9J2P7 530 aa14.38□□□□□ -0.11
HDAC6-233ENST00000489352 USP17L13C9JLJ4 530 aa14.38□□□□□ -0.11
HDAC6-233ENST00000489352 USP17L11C9JVI0 530 aa14.38□□□□□ -0.11
HDAC6-233ENST00000489352 USP17L18D6R9N7 530 aa14.38□□□□□ -0.11
HDAC6-233ENST00000489352 USP17L22D6RA61 530 aa14.38□□□□□ -0.11
HDAC6-233ENST00000489352 USP17L17D6RBQ6 530 aa14.38□□□□□ -0.11
HDAC6-233ENST00000489352 USP17L19D6RCP7 530 aa14.38□□□□□ -0.11
HDAC6-233ENST00000489352 USP17L20D6RJB6 530 aa14.38□□□□□ -0.11
HDAC6-233ENST00000489352 PGK1P00558 417 aa14.38□□□□□ -0.11
HDAC6-233ENST00000489352 ADORA2AP29274 412 aa14.38□□□□□ -0.11
HDAC6-233ENST00000489352 RABGGTBP53611 331 aa14.38□□□□□ -0.11
HDAC6-233ENST00000489352 USP17L24Q0WX57 530 aa14.38□□□□□ -0.11
HDAC6-233ENST00000489352 VTI1AQ96AJ9 217 aa14.38□□□□□ -0.11
HDAC6-233ENST00000489352 CD320Q9NPF0 282 aa14.38□□□□□ -0.11
HDAC6-233ENST00000489352 ABCF2Q9UG63 623 aa14.38□□□□□ -0.11
HDAC6-233ENST00000489352 ZNFX1Q9P2E3 1918 aaKnown RBP14.38□□□□□ -0.11
HDAC6-233ENST00000489352 SALL1Q9NSC2 1324 aa14.38□□□□□ -0.11
HDAC6-233ENST00000489352 F6X3S4 739 aa14.37□□□□□ -0.11
HDAC6-233ENST00000489352 POU3F3P20264 500 aaPredicted RBP14.37□□□□□ -0.11
HDAC6-233ENST00000489352 RRP1BQ14684 758 aaKnown RBP14.37□□□□□ -0.11
HDAC6-233ENST00000489352 SPTY2D1Q68D10 685 aaPredicted RBP14.37□□□□□ -0.11
HDAC6-233ENST00000489352 PPP1R12CQ9BZL4 782 aa14.37□□□□□ -0.11
HDAC6-233ENST00000489352 IL23AQ9NPF7 189 aa14.37□□□□□ -0.11
HDAC6-233ENST00000489352 ADAMTS8Q9UP79 889 aa14.37□□□□□ -0.11
HDAC6-233ENST00000489352 PCDHA11Q9Y5I1 949 aa14.37□□□□□ -0.11
HDAC6-233ENST00000489352 A0A0G2JMZ2 1700 aa14.37□□□□□ -0.11
HDAC6-233ENST00000489352 CDK5RAP2Q96SN8 1893 aa14.36□□□□□ -0.11
HDAC6-233ENST00000489352 RFXAPO00287 272 aa14.36□□□□□ -0.11
HDAC6-233ENST00000489352 TLR3O15455 904 aaKnown RBP14.36□□□□□ -0.11
HDAC6-233ENST00000489352 NPM3O75607 178 aaKnown RBP14.36□□□□□ -0.11
HDAC6-233ENST00000489352 CNMDO75829 334 aa14.36□□□□□ -0.11
HDAC6-233ENST00000489352 FGFR2P21802 821 aa14.36□□□□□ -0.11
HDAC6-233ENST00000489352 OTOP2Q7RTS6 562 aa14.36□□□□□ -0.11
HDAC6-233ENST00000489352 TSR2Q969E8 191 aaKnown RBP14.36□□□□□ -0.11
HDAC6-233ENST00000489352 MFSD14AQ96MC6 490 aa14.36□□□□□ -0.11
HDAC6-233ENST00000489352 FEZ1Q99689 392 aa14.36□□□□□ -0.11
HDAC6-233ENST00000489352 TSEN34Q9BSV6 310 aaKnown RBP14.36□□□□□ -0.11
HDAC6-233ENST00000489352 PI4KBQ9UBF8 816 aa14.36□□□□□ -0.11
HDAC6-233ENST00000489352 TBX21Q9UL17 535 aa14.36□□□□□ -0.11
HDAC6-233ENST00000489352 SLC4A7Q9Y6M7 1214 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms