RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 HERVK_113P62684 666 aa10.91□□□□□ -0.66
HDAC6-232ENST00000489053 ICA1Q05084 483 aa10.91□□□□□ -0.66
HDAC6-232ENST00000489053 PRKCZQ05513 592 aa10.91□□□□□ -0.66
HDAC6-232ENST00000489053 SEPT2Q15019 361 aa10.91□□□□□ -0.66
HDAC6-232ENST00000489053 SHROOM1Q2M3G4 852 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-232ENST00000489053 SLAIN1Q8ND83 568 aa10.91□□□□□ -0.66
HDAC6-232ENST00000489053 GPRC5AQ8NFJ5 357 aa10.91□□□□□ -0.66
HDAC6-232ENST00000489053 OTUD7AQ8TE49 926 aaPredicted RBP10.91□□□□□ -0.66
HDAC6-232ENST00000489053 EVI5LQ96CN4 794 aa10.91□□□□□ -0.66
HDAC6-232ENST00000489053 ZNF333Q96JL9 665 aa10.91□□□□□ -0.66
HDAC6-232ENST00000489053 STRBPQ96SI9 672 aaKnown RBP10.91□□□□□ -0.66
HDAC6-232ENST00000489053 TANGO6Q9C0B7 1094 aa10.91□□□□□ -0.66
HDAC6-232ENST00000489053 KIAA1683Q9H0B3 1180 aa10.91□□□□□ -0.66
HDAC6-232ENST00000489053 SUPT16HQ9Y5B9 1047 aaKnown RBP10.91□□□□□ -0.66
HDAC6-232ENST00000489053 LAMB1P07942 1786 aa10.9□□□□□ -0.66
HDAC6-232ENST00000489053 CYP2D7A0A087X1C5 515 aa10.9□□□□□ -0.66
HDAC6-232ENST00000489053 ADCY3O60266 1144 aa10.9□□□□□ -0.66
HDAC6-232ENST00000489053 VCAM1P19320 739 aa10.9□□□□□ -0.66
HDAC6-232ENST00000489053 HOXA7P31268 230 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-232ENST00000489053 CDK8P49336 464 aa10.9□□□□□ -0.66
HDAC6-232ENST00000489053 JAG1P78504 1218 aa10.9□□□□□ -0.66
HDAC6-232ENST00000489053 C12orf60Q5U649 245 aa10.9□□□□□ -0.66
HDAC6-232ENST00000489053 GIMAP6Q6P9H5 292 aa10.9□□□□□ -0.66
HDAC6-232ENST00000489053 CTR9Q6PD62 1173 aa10.9□□□□□ -0.66
HDAC6-232ENST00000489053 SAMD1Q6SPF0 538 aaPredicted RBP10.9□□□□□ -0.66
HDAC6-232ENST00000489053 STK11IPQ8N1F8 1099 aa10.9□□□□□ -0.66
HDAC6-232ENST00000489053 SLC44A5Q8NCS7 719 aa10.9□□□□□ -0.66
HDAC6-232ENST00000489053 EXOC6Q8TAG9 804 aa10.9□□□□□ -0.66
HDAC6-232ENST00000489053 P2RX7Q99572 595 aaKnown RBP10.9□□□□□ -0.66
HDAC6-232ENST00000489053 LNPKQ9C0E8 428 aa10.9□□□□□ -0.66
HDAC6-232ENST00000489053 NAPBQ9H115 298 aa10.9□□□□□ -0.66
HDAC6-232ENST00000489053 EMILIN3Q9NT22 766 aa10.9□□□□□ -0.66
HDAC6-232ENST00000489053 CHGBP05060 677 aa10.89□□□□□ -0.67
HDAC6-232ENST00000489053 MAPK4P31152 587 aa10.89□□□□□ -0.67
HDAC6-232ENST00000489053 FLT3LGP49771 235 aa10.89□□□□□ -0.67
HDAC6-232ENST00000489053 GABPAQ06546 454 aa10.89□□□□□ -0.67
HDAC6-232ENST00000489053 PDE4BQ07343 736 aa10.89□□□□□ -0.67
HDAC6-232ENST00000489053 C16orf86Q6ZW13 317 aa10.89□□□□□ -0.67
HDAC6-232ENST00000489053 ZNF444Q8N0Y2 327 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-232ENST00000489053 NKX2-3Q8TAU0 364 aa10.89□□□□□ -0.67
HDAC6-232ENST00000489053 PI4K2BQ8TCG2 481 aa10.89□□□□□ -0.67
HDAC6-232ENST00000489053 ACER1Q8TDN7 264 aa10.89□□□□□ -0.67
HDAC6-232ENST00000489053 OSBP2Q969R2 916 aa10.89□□□□□ -0.67
HDAC6-232ENST00000489053 RILPL2Q969X0 211 aa10.89□□□□□ -0.67
HDAC6-232ENST00000489053 C12orf42Q96LP6 360 aa10.89□□□□□ -0.67
HDAC6-232ENST00000489053 RPAP3Q9H6T3 665 aaPredicted RBP10.89□□□□□ -0.67
HDAC6-232ENST00000489053 KANSL2Q9H9L4 492 aa10.89□□□□□ -0.67
HDAC6-232ENST00000489053 GOPCQ9HD26 462 aa10.89□□□□□ -0.67
HDAC6-232ENST00000489053 ISY1Q9ULR0 285 aaKnown RBP10.89□□□□□ -0.67
HDAC6-232ENST00000489053 IVNS1ABPQ9Y6Y0 642 aa10.89□□□□□ -0.67
HDAC6-232ENST00000489053 PATL2C9JE40 543 aaKnown RBP10.88□□□□□ -0.67
HDAC6-232ENST00000489053 M0R2C6 588 aa10.88□□□□□ -0.67
HDAC6-232ENST00000489053 AKR1B1P15121 316 aa10.88□□□□□ -0.67
HDAC6-232ENST00000489053 PDE1AP54750 535 aa10.88□□□□□ -0.67
HDAC6-232ENST00000489053 CHD1LQ86WJ1 897 aa10.88□□□□□ -0.67
HDAC6-232ENST00000489053 NAV1Q8NEY1 1877 aa10.88□□□□□ -0.67
HDAC6-232ENST00000489053 SOCS4Q8WXH5 440 aa10.88□□□□□ -0.67
HDAC6-232ENST00000489053 LPAR1Q92633 364 aa10.88□□□□□ -0.67
HDAC6-232ENST00000489053 RNF208Q9H0X6 261 aa10.88□□□□□ -0.67
HDAC6-232ENST00000489053 HOXC10Q9NYD6 342 aa10.88□□□□□ -0.67
HDAC6-232ENST00000489053 RABGAP1Q9Y3P9 1069 aa10.88□□□□□ -0.67
HDAC6-232ENST00000489053 CTDP1Q9Y5B0 961 aaPredicted RBP10.88□□□□□ -0.67
HDAC6-232ENST00000489053 MYO5AQ9Y4I1 1855 aaKnown RBP10.87□□□□□ -0.67
HDAC6-232ENST00000489053 CENPFP49454 3210 aa10.87□□□□□ -0.67
HDAC6-232ENST00000489053 GSG1L2A8MUP6 293 aa10.87□□□□□ -0.67
HDAC6-232ENST00000489053 FLOT1O75955 427 aa10.87□□□□□ -0.67
HDAC6-232ENST00000489053 CTGFP29279 349 aa10.87□□□□□ -0.67
HDAC6-232ENST00000489053 MFAP1P55081 439 aaKnown RBP10.87□□□□□ -0.67
HDAC6-232ENST00000489053 ERVK-9P63128 1117 aa10.87□□□□□ -0.67
HDAC6-232ENST00000489053 ERVK-24P63145 666 aa10.87□□□□□ -0.67
HDAC6-232ENST00000489053 IRX6P78412 446 aaPredicted RBP10.87□□□□□ -0.67
HDAC6-232ENST00000489053 CAP1Q01518 475 aa10.87□□□□□ -0.67
HDAC6-232ENST00000489053 PLS1Q14651 629 aa10.87□□□□□ -0.67
HDAC6-232ENST00000489053 SBK1Q52WX2 424 aa10.87□□□□□ -0.67
HDAC6-232ENST00000489053 PPP4R3BQ5MIZ7 849 aa10.87□□□□□ -0.67
HDAC6-232ENST00000489053 ZMYM1Q5SVZ6 1142 aa10.87□□□□□ -0.67
HDAC6-232ENST00000489053 CATSPERGQ6ZRH7 1159 aa10.87□□□□□ -0.67
HDAC6-232ENST00000489053 SPICE1Q8N0Z3 855 aa10.87□□□□□ -0.67
HDAC6-232ENST00000489053 NUDT12Q9BQG2 462 aa10.87□□□□□ -0.67
HDAC6-232ENST00000489053 MORF4L1Q9UBU8 362 aa10.87□□□□□ -0.67
HDAC6-232ENST00000489053 STAP2Q9UGK3 403 aa10.87□□□□□ -0.67
HDAC6-232ENST00000489053 GABRQQ9UN88 632 aa10.87□□□□□ -0.67
HDAC6-232ENST00000489053 MYH1P12882 1939 aa10.87□□□□□ -0.67
HDAC6-232ENST00000489053 FOCADQ5VW36 1801 aa10.86□□□□□ -0.67
HDAC6-232ENST00000489053 POTEFA5A3E0 1075 aa10.86□□□□□ -0.67
HDAC6-232ENST00000489053 HMGCRP04035 888 aa10.86□□□□□ -0.67
HDAC6-232ENST00000489053 INHAP05111 366 aa10.86□□□□□ -0.67
HDAC6-232ENST00000489053 TSPY3P0CV98 308 aa10.86□□□□□ -0.67
HDAC6-232ENST00000489053 TSPY8P0CW00 308 aa10.86□□□□□ -0.67
HDAC6-232ENST00000489053 CCL5P13501 91 aa10.86□□□□□ -0.67
HDAC6-232ENST00000489053 EEF2P13639 858 aaKnown RBP10.86□□□□□ -0.67
HDAC6-232ENST00000489053 ELNP15502 786 aa10.86□□□□□ -0.67
HDAC6-232ENST00000489053 ZKSCAN1P17029 563 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-232ENST00000489053 EVX2Q03828 476 aa10.86□□□□□ -0.67
HDAC6-232ENST00000489053 IRF5Q13568 498 aa10.86□□□□□ -0.67
HDAC6-232ENST00000489053 COG2Q14746 738 aa10.86□□□□□ -0.67
HDAC6-232ENST00000489053 PLEKHH3Q7Z736 793 aa10.86□□□□□ -0.67
HDAC6-232ENST00000489053 TRMT44Q8IYL2 757 aaKnown RBP10.86□□□□□ -0.67
HDAC6-232ENST00000489053 IFNL3Q8IZI9 196 aa10.86□□□□□ -0.67
HDAC6-232ENST00000489053 PXYLP1Q8TE99 480 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms