RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 ICA1Q05084 483 aa15.34■□□□□ 0.05
PHF1-210ENST00000488767 SEPT2Q15019 361 aa15.34■□□□□ 0.05
PHF1-210ENST00000488767 ZYXQ15942 572 aaKnown RBP15.34■□□□□ 0.05
PHF1-210ENST00000488767 GPAT2Q6NUI2 795 aa15.34■□□□□ 0.05
PHF1-210ENST00000488767 STK11IPQ8N1F8 1099 aa15.34■□□□□ 0.05
PHF1-210ENST00000488767 KIAA1683Q9H0B3 1180 aa15.34■□□□□ 0.05
PHF1-210ENST00000488767 R3HDMLQ9H3Y0 253 aa15.34■□□□□ 0.05
PHF1-210ENST00000488767 BAZ2AQ9UIF9 1905 aaKnown RBP15.34■□□□□ 0.05
PHF1-210ENST00000488767 CYP2C8P10632 490 aa15.33■□□□□ 0.04
PHF1-210ENST00000488767 AKR1B1P15121 316 aa15.33■□□□□ 0.04
PHF1-210ENST00000488767 EVX2Q03828 476 aa15.33■□□□□ 0.04
PHF1-210ENST00000488767 PPARAQ07869 468 aa15.33■□□□□ 0.04
PHF1-210ENST00000488767 SHROOM1Q2M3G4 852 aaPredicted RBP15.33■□□□□ 0.04
PHF1-210ENST00000488767 TREML2Q5T2D2 321 aa15.33■□□□□ 0.04
PHF1-210ENST00000488767 KANSL2Q9H9L4 492 aa15.33■□□□□ 0.04
PHF1-210ENST00000488767 CPA4Q9UI42 421 aa15.33■□□□□ 0.04
PHF1-210ENST00000488767 PHIPQ8WWQ0 1821 aa15.32■□□□□ 0.04
PHF1-210ENST00000488767 HSPD1P10809 573 aaKnown RBP15.32■□□□□ 0.04
PHF1-210ENST00000488767 GCLCP48506 637 aaPredicted RBP15.32■□□□□ 0.04
PHF1-210ENST00000488767 ATP2B2Q01814 1243 aa15.32■□□□□ 0.04
PHF1-210ENST00000488767 ALX1Q15699 326 aa15.32■□□□□ 0.04
PHF1-210ENST00000488767 PPP4R3BQ5MIZ7 849 aa15.32■□□□□ 0.04
PHF1-210ENST00000488767 CD99L2Q8TCZ2 262 aa15.32■□□□□ 0.04
PHF1-210ENST00000488767 GTF3C2Q8WUA4 911 aaPredicted RBP15.32■□□□□ 0.04
PHF1-210ENST00000488767 MCOLN1Q9GZU1 580 aa15.32■□□□□ 0.04
PHF1-210ENST00000488767 EFCC1Q9HA90 598 aa15.32■□□□□ 0.04
PHF1-210ENST00000488767 TRIM17Q9Y577 477 aa15.32■□□□□ 0.04
PHF1-210ENST00000488767 CASP8AP2Q9UKL3 1982 aa15.32■□□□□ 0.04
PHF1-210ENST00000488767 GNRH1P01148 92 aa15.31■□□□□ 0.04
PHF1-210ENST00000488767 TSPY3P0CV98 308 aa15.31■□□□□ 0.04
PHF1-210ENST00000488767 TSPY8P0CW00 308 aa15.31■□□□□ 0.04
PHF1-210ENST00000488767 GSPT1P15170 499 aaKnown RBP15.31■□□□□ 0.04
PHF1-210ENST00000488767 HOXA7P31268 230 aaPredicted RBP15.31■□□□□ 0.04
PHF1-210ENST00000488767 LACTBP83111 547 aaPredicted RBP15.31■□□□□ 0.04
PHF1-210ENST00000488767 VPS53Q5VIR6 699 aa15.31■□□□□ 0.04
PHF1-210ENST00000488767 C17orf99Q6UX52 265 aa15.31■□□□□ 0.04
PHF1-210ENST00000488767 C12orf42Q96LP6 360 aa15.31■□□□□ 0.04
PHF1-210ENST00000488767 ZMYM6O95789 1325 aa15.31■□□□□ 0.04
PHF1-210ENST00000488767 RAD50Q92878 1312 aa15.31■□□□□ 0.04
PHF1-210ENST00000488767 USP17L15C9J2P7 530 aa15.3■□□□□ 0.04
PHF1-210ENST00000488767 USP17L13C9JLJ4 530 aa15.3■□□□□ 0.04
PHF1-210ENST00000488767 USP17L11C9JVI0 530 aa15.3■□□□□ 0.04
PHF1-210ENST00000488767 USP17L18D6R9N7 530 aa15.3■□□□□ 0.04
PHF1-210ENST00000488767 USP17L22D6RA61 530 aa15.3■□□□□ 0.04
PHF1-210ENST00000488767 USP17L17D6RBQ6 530 aa15.3■□□□□ 0.04
PHF1-210ENST00000488767 USP17L19D6RCP7 530 aa15.3■□□□□ 0.04
PHF1-210ENST00000488767 LOC285556D6RIA3 1793 aa15.3■□□□□ 0.04
PHF1-210ENST00000488767 USP17L20D6RJB6 530 aa15.3■□□□□ 0.04
PHF1-210ENST00000488767 PRDM1O75626 825 aa15.3■□□□□ 0.04
PHF1-210ENST00000488767 MYH8P13535 1937 aa15.3■□□□□ 0.04
PHF1-210ENST00000488767 RASA1P20936 1047 aa15.3■□□□□ 0.04
PHF1-210ENST00000488767 HOXD10P28358 340 aa15.3■□□□□ 0.04
PHF1-210ENST00000488767 GUCY1A2P33402 732 aa15.3■□□□□ 0.04
PHF1-210ENST00000488767 USP17L24Q0WX57 530 aa15.3■□□□□ 0.04
PHF1-210ENST00000488767 ZNF589Q86UQ0 364 aaPredicted RBP15.3■□□□□ 0.04
PHF1-210ENST00000488767 ACER1Q8TDN7 264 aa15.3■□□□□ 0.04
PHF1-210ENST00000488767 LPAR1Q92633 364 aa15.3■□□□□ 0.04
PHF1-210ENST00000488767 ASCC2Q9H1I8 757 aaPredicted RBP15.3■□□□□ 0.04
PHF1-210ENST00000488767 GOPCQ9HD26 462 aa15.3■□□□□ 0.04
PHF1-210ENST00000488767 TOMM22Q9NS69 142 aa15.3■□□□□ 0.04
PHF1-210ENST00000488767 EMILIN3Q9NT22 766 aa15.3■□□□□ 0.04
PHF1-210ENST00000488767 CTNNA3Q9UI47 895 aa15.3■□□□□ 0.04
PHF1-210ENST00000488767 TSPY2A6NKD2 308 aa15.29■□□□□ 0.04
PHF1-210ENST00000488767 RAD21O60216 631 aa15.29■□□□□ 0.04
PHF1-210ENST00000488767 FMNL1O95466 1100 aaPredicted RBP15.29■□□□□ 0.04
PHF1-210ENST00000488767 FGAP02671 866 aa15.29■□□□□ 0.04
PHF1-210ENST00000488767 VCAM1P19320 739 aa15.29■□□□□ 0.04
PHF1-210ENST00000488767 FCGRTP55899 365 aa15.29■□□□□ 0.04
PHF1-210ENST00000488767 FBXO46Q6PJ61 603 aaPredicted RBP15.29■□□□□ 0.04
PHF1-210ENST00000488767 OTOP1Q7RTM1 612 aa15.29■□□□□ 0.04
PHF1-210ENST00000488767 CCAR1Q8IX12 1150 aaKnown RBP15.29■□□□□ 0.04
PHF1-210ENST00000488767 TANGO6Q9C0B7 1094 aa15.29■□□□□ 0.04
PHF1-210ENST00000488767 RNF41Q9H4P4 317 aaPredicted RBP15.29■□□□□ 0.04
PHF1-210ENST00000488767 PPP4R2Q9NY27 417 aa15.29■□□□□ 0.04
PHF1-210ENST00000488767 ANAPC4Q9UJX5 808 aa15.29■□□□□ 0.04
PHF1-210ENST00000488767 TMX2Q9Y320 296 aa15.29■□□□□ 0.04
PHF1-210ENST00000488767 PTPRFP10586 1907 aa15.29■□□□□ 0.04
PHF1-210ENST00000488767 ADGRA2Q96PE1 1338 aa15.28■□□□□ 0.04
PHF1-210ENST00000488767 SMIM22K7EJ46 135 aa15.28■□□□□ 0.04
PHF1-210ENST00000488767 ZNF213O14771 459 aa15.28■□□□□ 0.04
PHF1-210ENST00000488767 PCP11498 1178 aaKnown RBP15.28■□□□□ 0.04
PHF1-210ENST00000488767 EEF2P13639 858 aaKnown RBP15.28■□□□□ 0.04
PHF1-210ENST00000488767 PRMT2P55345 433 aa15.28■□□□□ 0.04
PHF1-210ENST00000488767 FAM110CQ1W6H9 321 aa15.28■□□□□ 0.04
PHF1-210ENST00000488767 CASC1Q6TDU7 716 aa15.28■□□□□ 0.04
PHF1-210ENST00000488767 ANKRD13CQ8N6S4 541 aa15.28■□□□□ 0.04
PHF1-210ENST00000488767 ABHD8Q96I13 439 aa15.28■□□□□ 0.04
PHF1-210ENST00000488767 DSCC1Q9BVC3 393 aa15.28■□□□□ 0.04
PHF1-210ENST00000488767 RANBP6O60518 1105 aaKnown RBP15.27■□□□□ 0.04
PHF1-210ENST00000488767 BCRP11274 1271 aa15.27■□□□□ 0.04
PHF1-210ENST00000488767 PSMC4P43686 418 aa15.27■□□□□ 0.04
PHF1-210ENST00000488767 NT5C2P49902 561 aa15.27■□□□□ 0.04
PHF1-210ENST00000488767 HERVK_113P62684 666 aa15.27■□□□□ 0.04
PHF1-210ENST00000488767 TFAP4Q01664 338 aa15.27■□□□□ 0.04
PHF1-210ENST00000488767 CTDSPL2Q05D32 466 aa15.27■□□□□ 0.04
PHF1-210ENST00000488767 IMMTQ16891 758 aaKnown RBP15.27■□□□□ 0.04
PHF1-210ENST00000488767 RPAP3Q9H6T3 665 aaPredicted RBP15.27■□□□□ 0.04
PHF1-210ENST00000488767 VCPKMTQ9H867 229 aa15.27■□□□□ 0.04
PHF1-210ENST00000488767 CWC22Q9HCG8 908 aaKnown RBP15.27■□□□□ 0.04
PHF1-210ENST00000488767 NYAP2Q9P242 653 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms