RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 AKR1B1P15121 316 aa17.93■□□□□ 0.46
CXCL12-207ENST00000488591 USP14P54578 494 aa17.93■□□□□ 0.46
CXCL12-207ENST00000488591 PPARAQ07869 468 aa17.93■□□□□ 0.46
CXCL12-207ENST00000488591 VPS53Q5VIR6 699 aa17.93■□□□□ 0.46
CXCL12-207ENST00000488591 USP17L2Q6R6M4 530 aa17.93■□□□□ 0.46
CXCL12-207ENST00000488591 ZNF589Q86UQ0 364 aaPredicted RBP17.93■□□□□ 0.46
CXCL12-207ENST00000488591 ZNF444Q8N0Y2 327 aaPredicted RBP17.93■□□□□ 0.46
CXCL12-207ENST00000488591 PNMA3Q9UL41 463 aa17.93■□□□□ 0.46
CXCL12-207ENST00000488591 PTPRFP10586 1907 aa17.93■□□□□ 0.46
CXCL12-207ENST00000488591 OSBPP22059 807 aa17.92■□□□□ 0.46
CXCL12-207ENST00000488591 GUCY1A2P33402 732 aa17.92■□□□□ 0.46
CXCL12-207ENST00000488591 SP3Q02447 781 aa17.92■□□□□ 0.46
CXCL12-207ENST00000488591 TNS4Q8IZW8 715 aa17.92■□□□□ 0.46
CXCL12-207ENST00000488591 PPP4R2Q9NY27 417 aa17.92■□□□□ 0.46
CXCL12-207ENST00000488591 FOXP2O15409 715 aa17.91■□□□□ 0.46
CXCL12-207ENST00000488591 ARHGEF6Q15052 776 aa17.91■□□□□ 0.46
CXCL12-207ENST00000488591 TREML2Q5T2D2 321 aa17.91■□□□□ 0.46
CXCL12-207ENST00000488591 ERO1AQ96HE7 468 aa17.91■□□□□ 0.46
CXCL12-207ENST00000488591 KIAA1683Q9H0B3 1180 aa17.91■□□□□ 0.46
CXCL12-207ENST00000488591 SH2D4AQ9H788 454 aa17.91■□□□□ 0.46
CXCL12-207ENST00000488591 KANSL2Q9H9L4 492 aa17.91■□□□□ 0.46
CXCL12-207ENST00000488591 ARHGEF10LQ9HCE6 1279 aa17.91■□□□□ 0.46
CXCL12-207ENST00000488591 FGAP02671 866 aa17.9■□□□□ 0.46
CXCL12-207ENST00000488591 CYP2C8P10632 490 aa17.9■□□□□ 0.46
CXCL12-207ENST00000488591 RASA1P20936 1047 aa17.9■□□□□ 0.46
CXCL12-207ENST00000488591 ICA1Q05084 483 aa17.9■□□□□ 0.46
CXCL12-207ENST00000488591 ZYXQ15942 572 aaKnown RBP17.9■□□□□ 0.46
CXCL12-207ENST00000488591 SMCR8Q8TEV9 937 aaPredicted RBP17.9■□□□□ 0.46
CXCL12-207ENST00000488591 ZMYM6O95789 1325 aa17.9■□□□□ 0.46
CXCL12-207ENST00000488591 LOC285556D6RIA3 1793 aa17.89■□□□□ 0.45
CXCL12-207ENST00000488591 PRDM1O75626 825 aa17.89■□□□□ 0.45
CXCL12-207ENST00000488591 CHMLP26374 656 aa17.89■□□□□ 0.45
CXCL12-207ENST00000488591 KIF22Q14807 665 aa17.89■□□□□ 0.45
CXCL12-207ENST00000488591 CTU1Q7Z7A3 348 aaKnown RBP17.89■□□□□ 0.45
CXCL12-207ENST00000488591 ACER1Q8TDN7 264 aa17.89■□□□□ 0.45
CXCL12-207ENST00000488591 EMILIN3Q9NT22 766 aa17.89■□□□□ 0.45
CXCL12-207ENST00000488591 CPA4Q9UI42 421 aa17.89■□□□□ 0.45
CXCL12-207ENST00000488591 ANAPC4Q9UJX5 808 aa17.89■□□□□ 0.45
CXCL12-207ENST00000488591 RAD50Q92878 1312 aa17.89■□□□□ 0.45
CXCL12-207ENST00000488591 HOXA7P31268 230 aaPredicted RBP17.88■□□□□ 0.45
CXCL12-207ENST00000488591 IRX3P78415 501 aaPredicted RBP17.88■□□□□ 0.45
CXCL12-207ENST00000488591 ATP2B2Q01814 1243 aa17.88■□□□□ 0.45
CXCL12-207ENST00000488591 CTDSPL2Q05D32 466 aa17.88■□□□□ 0.45
CXCL12-207ENST00000488591 DGKZQ13574 1117 aa17.88■□□□□ 0.45
CXCL12-207ENST00000488591 C12orf42Q96LP6 360 aa17.88■□□□□ 0.45
CXCL12-207ENST00000488591 CTNNA3Q9UI47 895 aa17.88■□□□□ 0.45
CXCL12-207ENST00000488591 TSPY3P0CV98 308 aa17.87■□□□□ 0.45
CXCL12-207ENST00000488591 TSPY8P0CW00 308 aa17.87■□□□□ 0.45
CXCL12-207ENST00000488591 PKN2Q16513 984 aaKnown RBP17.87■□□□□ 0.45
CXCL12-207ENST00000488591 BMP2KLQ5H9B9 411 aa17.87■□□□□ 0.45
CXCL12-207ENST00000488591 C17orf99Q6UX52 265 aa17.87■□□□□ 0.45
CXCL12-207ENST00000488591 DSCC1Q9BVC3 393 aa17.87■□□□□ 0.45
CXCL12-207ENST00000488591 TMX2Q9Y320 296 aa17.87■□□□□ 0.45
CXCL12-207ENST00000488591 A0A1W2PRG0 241 aa17.86■□□□□ 0.45
CXCL12-207ENST00000488591 USP17L15C9J2P7 530 aa17.86■□□□□ 0.45
CXCL12-207ENST00000488591 USP17L13C9JLJ4 530 aa17.86■□□□□ 0.45
CXCL12-207ENST00000488591 USP17L11C9JVI0 530 aa17.86■□□□□ 0.45
CXCL12-207ENST00000488591 USP17L18D6R9N7 530 aa17.86■□□□□ 0.45
CXCL12-207ENST00000488591 USP17L22D6RA61 530 aa17.86■□□□□ 0.45
CXCL12-207ENST00000488591 USP17L17D6RBQ6 530 aa17.86■□□□□ 0.45
CXCL12-207ENST00000488591 USP17L19D6RCP7 530 aa17.86■□□□□ 0.45
CXCL12-207ENST00000488591 USP17L20D6RJB6 530 aa17.86■□□□□ 0.45
CXCL12-207ENST00000488591 ZNF213O14771 459 aa17.86■□□□□ 0.45
CXCL12-207ENST00000488591 EEF2P13639 858 aaKnown RBP17.86■□□□□ 0.45
CXCL12-207ENST00000488591 GCLCP48506 637 aaPredicted RBP17.86■□□□□ 0.45
CXCL12-207ENST00000488591 TFAP4Q01664 338 aa17.86■□□□□ 0.45
CXCL12-207ENST00000488591 USP17L24Q0WX57 530 aa17.86■□□□□ 0.45
CXCL12-207ENST00000488591 PPP4R3BQ5MIZ7 849 aa17.86■□□□□ 0.45
CXCL12-207ENST00000488591 CD99L2Q8TCZ2 262 aa17.86■□□□□ 0.45
CXCL12-207ENST00000488591 ASCC2Q9H1I8 757 aaPredicted RBP17.86■□□□□ 0.45
CXCL12-207ENST00000488591 TOMM22Q9NS69 142 aa17.86■□□□□ 0.45
CXCL12-207ENST00000488591 TSPY2A6NKD2 308 aa17.85■□□□□ 0.45
CXCL12-207ENST00000488591 PCP11498 1178 aaKnown RBP17.85■□□□□ 0.45
CXCL12-207ENST00000488591 SKAP1Q86WV1 359 aa17.85■□□□□ 0.45
CXCL12-207ENST00000488591 CLEC10AQ8IUN9 316 aa17.85■□□□□ 0.45
CXCL12-207ENST00000488591 SIAH1Q8IUQ4 282 aa17.85■□□□□ 0.45
CXCL12-207ENST00000488591 NEDD1Q8NHV4 660 aa17.85■□□□□ 0.45
CXCL12-207ENST00000488591 LPAR1Q92633 364 aa17.85■□□□□ 0.45
CXCL12-207ENST00000488591 ADGRA2Q96PE1 1338 aa17.85■□□□□ 0.45
CXCL12-207ENST00000488591 RNF41Q9H4P4 317 aaPredicted RBP17.85■□□□□ 0.45
CXCL12-207ENST00000488591 GOPCQ9HD26 462 aa17.85■□□□□ 0.45
CXCL12-207ENST00000488591 NYAP2Q9P242 653 aa17.85■□□□□ 0.45
CXCL12-207ENST00000488591 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.85■□□□□ 0.45
CXCL12-207ENST00000488591 ORC4O43929 436 aa17.84■□□□□ 0.45
CXCL12-207ENST00000488591 RANBP6O60518 1105 aaKnown RBP17.84■□□□□ 0.45
CXCL12-207ENST00000488591 BCRP11274 1271 aa17.84■□□□□ 0.45
CXCL12-207ENST00000488591 VCAM1P19320 739 aa17.84■□□□□ 0.45
CXCL12-207ENST00000488591 HAND2P61296 217 aa17.84■□□□□ 0.45
CXCL12-207ENST00000488591 LACTBP83111 547 aaPredicted RBP17.84■□□□□ 0.45
CXCL12-207ENST00000488591 IMMTQ16891 758 aaKnown RBP17.84■□□□□ 0.45
CXCL12-207ENST00000488591 FAM47AQ5JRC9 791 aa17.84■□□□□ 0.45
CXCL12-207ENST00000488591 MFSD6Q6ZSS7 791 aa17.84■□□□□ 0.45
CXCL12-207ENST00000488591 GTF3C2Q8WUA4 911 aaPredicted RBP17.84■□□□□ 0.45
CXCL12-207ENST00000488591 P2RX7Q99572 595 aaKnown RBP17.84■□□□□ 0.45
CXCL12-207ENST00000488591 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.84■□□□□ 0.45
CXCL12-207ENST00000488591 MCOLN1Q9GZU1 580 aa17.84■□□□□ 0.45
CXCL12-207ENST00000488591 EFCC1Q9HA90 598 aa17.84■□□□□ 0.45
CXCL12-207ENST00000488591 TRIM17Q9Y577 477 aa17.84■□□□□ 0.45
CXCL12-207ENST00000488591 RAD21O60216 631 aa17.83■□□□□ 0.44
CXCL12-207ENST00000488591 GNRH1P01148 92 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms