RNA–Protein interactions for RNA: ENST00000488391.5

LCN2-206, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 485 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-206ENST00000488391 COL2A1P02458 1487 aaPredicted RBP13.34□□□□□ -0.27
LCN2-206ENST00000488391 SRGAP3O43295 1099 aa13.33□□□□□ -0.28
LCN2-206ENST00000488391 IGHDP01880 384 aa13.33□□□□□ -0.28
LCN2-206ENST00000488391 GNAI2P04899 355 aa13.33□□□□□ -0.28
LCN2-206ENST00000488391 WDR78Q5VTH9 848 aa13.33□□□□□ -0.28
LCN2-206ENST00000488391 MFSD14CQ5VZR4 134 aa13.33□□□□□ -0.28
LCN2-206ENST00000488391 CDX2Q99626 313 aaPredicted RBP13.33□□□□□ -0.28
LCN2-206ENST00000488391 SNRKQ9NRH2 765 aa13.33□□□□□ -0.28
LCN2-206ENST00000488391 PALD1Q9ULE6 856 aa13.33□□□□□ -0.28
LCN2-206ENST00000488391 BAG3O95817 575 aa13.32□□□□□ -0.28
LCN2-206ENST00000488391 MCAMP43121 646 aa13.32□□□□□ -0.28
LCN2-206ENST00000488391 ATP2B2Q01814 1243 aa13.32□□□□□ -0.28
LCN2-206ENST00000488391 SHHQ15465 462 aa13.32□□□□□ -0.28
LCN2-206ENST00000488391 ZYXQ15942 572 aaKnown RBP13.32□□□□□ -0.28
LCN2-206ENST00000488391 NAA16Q6N069 864 aaPredicted RBP13.32□□□□□ -0.28
LCN2-206ENST00000488391 USP17L2Q6R6M4 530 aa13.32□□□□□ -0.28
LCN2-206ENST00000488391 SEMA6BQ9H3T3 888 aa13.32□□□□□ -0.28
LCN2-206ENST00000488391 PRKAG2Q9UGJ0 569 aa13.32□□□□□ -0.28
LCN2-206ENST00000488391 DDX20Q9UHI6 824 aaKnown RBP13.32□□□□□ -0.28
LCN2-206ENST00000488391 SAP30BPQ9UHR5 308 aaKnown RBP13.32□□□□□ -0.28
LCN2-206ENST00000488391 ZBTB21Q9ULJ3 1066 aa13.32□□□□□ -0.28
LCN2-206ENST00000488391 CNMDO75829 334 aa13.31□□□□□ -0.28
LCN2-206ENST00000488391 GLRX3O76003 335 aaKnown RBP13.31□□□□□ -0.28
LCN2-206ENST00000488391 ARID4AP29374 1257 aaPredicted RBP13.31□□□□□ -0.28
LCN2-206ENST00000488391 RTP1P59025 263 aa13.31□□□□□ -0.28
LCN2-206ENST00000488391 SMC5Q8IY18 1101 aa13.31□□□□□ -0.28
LCN2-206ENST00000488391 MAFAQ8NHW3 353 aaPredicted RBP13.31□□□□□ -0.28
LCN2-206ENST00000488391 GTF3C2Q8WUA4 911 aaPredicted RBP13.31□□□□□ -0.28
LCN2-206ENST00000488391 ATP11BQ9Y2G3 1177 aa13.31□□□□□ -0.28
LCN2-206ENST00000488391 RABGAP1Q9Y3P9 1069 aa13.31□□□□□ -0.28
LCN2-206ENST00000488391 SIPA1L1O43166 1804 aa13.31□□□□□ -0.28
LCN2-206ENST00000488391 SLC15A5A6NIM6 579 aa13.3□□□□□ -0.28
LCN2-206ENST00000488391 HMMRO75330 724 aa13.3□□□□□ -0.28
LCN2-206ENST00000488391 GH2P01242 217 aa13.3□□□□□ -0.28
LCN2-206ENST00000488391 PLCG2P16885 1265 aa13.3□□□□□ -0.28
LCN2-206ENST00000488391 PTPREP23469 700 aa13.3□□□□□ -0.28
LCN2-206ENST00000488391 CYP2C19P33261 490 aa13.3□□□□□ -0.28
LCN2-206ENST00000488391 PPP4CP60510 307 aa13.3□□□□□ -0.28
LCN2-206ENST00000488391 CCNA1P78396 465 aa13.3□□□□□ -0.28
LCN2-206ENST00000488391 C9orf50Q5SZB4 431 aa13.3□□□□□ -0.28
LCN2-206ENST00000488391 GJC2Q5T442 439 aaPredicted RBP13.3□□□□□ -0.28
LCN2-206ENST00000488391 CEP85Q6P2H3 762 aa13.3□□□□□ -0.28
LCN2-206ENST00000488391 ADGRA1Q86SQ6 560 aa13.3□□□□□ -0.28
LCN2-206ENST00000488391 METTL16Q86W50 562 aaKnown RBP13.3□□□□□ -0.28
LCN2-206ENST00000488391 TRPV1Q8NER1 839 aa13.3□□□□□ -0.28
LCN2-206ENST00000488391 NPLOC4Q8TAT6 608 aa13.3□□□□□ -0.28
LCN2-206ENST00000488391 LPAR1Q92633 364 aa13.3□□□□□ -0.28
LCN2-206ENST00000488391 C1orf115Q9H7X2 142 aa13.3□□□□□ -0.28
LCN2-206ENST00000488391 GINM1Q9NU53 330 aa13.3□□□□□ -0.28
LCN2-206ENST00000488391 FLT1P17948 1338 aa13.3□□□□□ -0.28
LCN2-206ENST00000488391 PRUNE2Q8WUY3 3088 aa13.29□□□□□ -0.28
LCN2-206ENST00000488391 USP17L15C9J2P7 530 aa13.29□□□□□ -0.28
LCN2-206ENST00000488391 USP17L13C9JLJ4 530 aa13.29□□□□□ -0.28
LCN2-206ENST00000488391 USP17L11C9JVI0 530 aa13.29□□□□□ -0.28
LCN2-206ENST00000488391 USP17L18D6R9N7 530 aa13.29□□□□□ -0.28
LCN2-206ENST00000488391 USP17L22D6RA61 530 aa13.29□□□□□ -0.28
LCN2-206ENST00000488391 USP17L17D6RBQ6 530 aa13.29□□□□□ -0.28
LCN2-206ENST00000488391 USP17L19D6RCP7 530 aa13.29□□□□□ -0.28
LCN2-206ENST00000488391 USP17L20D6RJB6 530 aa13.29□□□□□ -0.28
LCN2-206ENST00000488391 MYCNP04198 464 aaPredicted RBP13.29□□□□□ -0.28
LCN2-206ENST00000488391 UQCRFS1P1P0C7P4 283 aa13.29□□□□□ -0.28
LCN2-206ENST00000488391 USP17L24Q0WX57 530 aa13.29□□□□□ -0.28
LCN2-206ENST00000488391 SIRT2Q8IXJ6 389 aa13.29□□□□□ -0.28
LCN2-206ENST00000488391 MYLIPQ8WY64 445 aa13.29□□□□□ -0.28
LCN2-206ENST00000488391 FEZ1Q99689 392 aa13.29□□□□□ -0.28
LCN2-206ENST00000488391 PRDM5Q9NQX1 630 aaPredicted RBP13.29□□□□□ -0.28
LCN2-206ENST00000488391 FRMPD3Q5JV73 1810 aa13.28□□□□□ -0.28
LCN2-206ENST00000488391 DNM1LO00429 736 aa13.28□□□□□ -0.28
LCN2-206ENST00000488391 MSCO60682 206 aa13.28□□□□□ -0.28
LCN2-206ENST00000488391 HLA-DOAP06340 250 aa13.28□□□□□ -0.28
LCN2-206ENST00000488391 DYNLL1P63167 89 aaKnown RBP13.28□□□□□ -0.28
LCN2-206ENST00000488391 G3BP1Q13283 466 aaKnown RBP eCLIP13.28□□□□□ -0.28
LCN2-206ENST00000488391 ANO1Q5XXA6 986 aa13.28□□□□□ -0.28
LCN2-206ENST00000488391 SLC39A5Q6ZMH5 540 aa13.28□□□□□ -0.28
LCN2-206ENST00000488391 CATSPERGQ6ZRH7 1159 aa13.28□□□□□ -0.28
LCN2-206ENST00000488391 BADQ92934 168 aa13.28□□□□□ -0.28
LCN2-206ENST00000488391 PRDM6Q9NQX0 595 aa13.28□□□□□ -0.28
LCN2-206ENST00000488391 BTBD7Q9P203 1132 aa13.28□□□□□ -0.28
LCN2-206ENST00000488391 IVNS1ABPQ9Y6Y0 642 aa13.28□□□□□ -0.28
LCN2-206ENST00000488391 ATP8B2P98198 1209 aa13.27□□□□□ -0.29
LCN2-206ENST00000488391 MTX1Q13505 466 aa13.27□□□□□ -0.29
LCN2-206ENST00000488391 RAB3GAP1Q15042 981 aa13.27□□□□□ -0.29
LCN2-206ENST00000488391 TTC39AQ5SRH9 613 aa13.27□□□□□ -0.29
LCN2-206ENST00000488391 ARRDC4Q8NCT1 418 aa13.27□□□□□ -0.29
LCN2-206ENST00000488391 ACER1Q8TDN7 264 aa13.27□□□□□ -0.29
LCN2-206ENST00000488391 C12orf42Q96LP6 360 aa13.27□□□□□ -0.29
LCN2-206ENST00000488391 TTYH1Q9H313 450 aaPredicted RBP13.27□□□□□ -0.29
LCN2-206ENST00000488391 DCTPP1Q9H773 170 aa13.27□□□□□ -0.29
LCN2-206ENST00000488391 CDK5RAP2Q96SN8 1893 aa13.27□□□□□ -0.29
LCN2-206ENST00000488391 PNMA6EA0A0J9YXQ4 647 aa13.26□□□□□ -0.29
LCN2-206ENST00000488391 KBTBD13C9JR72 458 aa13.26□□□□□ -0.29
LCN2-206ENST00000488391 CYP2E1P05181 493 aaPredicted RBP13.26□□□□□ -0.29
LCN2-206ENST00000488391 HOXC6P09630 235 aa13.26□□□□□ -0.29
LCN2-206ENST00000488391 GRB14Q14449 540 aa13.26□□□□□ -0.29
LCN2-206ENST00000488391 TRIM60Q495X7 471 aa13.26□□□□□ -0.29
LCN2-206ENST00000488391 EYSQ5T1H1 3165 aa13.26□□□□□ -0.29
LCN2-206ENST00000488391 MAST2Q6P0Q8 1798 aa13.26□□□□□ -0.29
LCN2-206ENST00000488391 SH3RF1Q7Z6J0 888 aa13.26□□□□□ -0.29
LCN2-206ENST00000488391 DPP9Q86TI2 863 aa13.26□□□□□ -0.29
LCN2-206ENST00000488391 FERMT2Q96AC1 680 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms