RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 ALDH1B1P30837 517 aa7.62□□□□□ -1.19
CDHR3-213ENST00000488386 GNAI1P63096 354 aa7.62□□□□□ -1.19
CDHR3-213ENST00000488386 FKBP4Q02790 459 aaKnown RBP eCLIP7.62□□□□□ -1.19
CDHR3-213ENST00000488386 ZNF211Q13398 564 aaPredicted RBP7.62□□□□□ -1.19
CDHR3-213ENST00000488386 HIF1AQ16665 826 aa7.62□□□□□ -1.19
CDHR3-213ENST00000488386 PARP10Q53GL7 1025 aa7.62□□□□□ -1.19
CDHR3-213ENST00000488386 HELQQ8TDG4 1101 aa7.62□□□□□ -1.19
CDHR3-213ENST00000488386 WHAMMQ8TF30 809 aa7.62□□□□□ -1.19
CDHR3-213ENST00000488386 FAM89AQ96GI7 184 aa7.62□□□□□ -1.19
CDHR3-213ENST00000488386 RBM17Q96I25 401 aaKnown RBP7.62□□□□□ -1.19
CDHR3-213ENST00000488386 SLC30A3Q99726 388 aa7.62□□□□□ -1.19
CDHR3-213ENST00000488386 MYD88Q99836 296 aa7.62□□□□□ -1.19
CDHR3-213ENST00000488386 ANO2Q9NQ90 1003 aa7.62□□□□□ -1.19
CDHR3-213ENST00000488386 DBF4Q9UBU7 674 aaPredicted RBP7.62□□□□□ -1.19
CDHR3-213ENST00000488386 TRMT112Q9UI30 125 aaKnown RBP7.62□□□□□ -1.19
CDHR3-213ENST00000488386 RIC1Q4ADV7 1423 aa7.61□□□□□ -1.19
CDHR3-213ENST00000488386 IBTKQ9P2D0 1353 aaPredicted RBP7.61□□□□□ -1.19
CDHR3-213ENST00000488386 LTBP3Q9NS15 1303 aa7.61□□□□□ -1.19
CDHR3-213ENST00000488386 OPLAHO14841 1288 aa7.61□□□□□ -1.19
CDHR3-213ENST00000488386 MICAL2O94851 1124 aa7.61□□□□□ -1.19
CDHR3-213ENST00000488386 SLURP2P0DP57 97 aa7.61□□□□□ -1.19
CDHR3-213ENST00000488386 BMP4P12644 408 aa7.61□□□□□ -1.19
CDHR3-213ENST00000488386 INPP5BP32019 993 aa7.61□□□□□ -1.19
CDHR3-213ENST00000488386 IARSP41252 1262 aaKnown RBP7.61□□□□□ -1.19
CDHR3-213ENST00000488386 SRSF11Q05519 484 aaKnown RBP7.61□□□□□ -1.19
CDHR3-213ENST00000488386 G2E3Q7L622 706 aa7.61□□□□□ -1.19
CDHR3-213ENST00000488386 RAB44Q7Z6P3 723 aaPredicted RBP7.61□□□□□ -1.19
CDHR3-213ENST00000488386 PLBD2Q8NHP8 589 aa7.61□□□□□ -1.19
CDHR3-213ENST00000488386 ISCA1Q9BUE6 129 aa7.61□□□□□ -1.19
CDHR3-213ENST00000488386 MARK1Q9P0L2 795 aa7.61□□□□□ -1.19
CDHR3-213ENST00000488386 RNF123Q5XPI4 1314 aa7.6□□□□□ -1.19
CDHR3-213ENST00000488386 SH3TC1Q8TE82 1336 aa7.6□□□□□ -1.19
CDHR3-213ENST00000488386 HOXB7P09629 217 aa7.6□□□□□ -1.19
CDHR3-213ENST00000488386 VEGFAP15692 232 aaPredicted RBP7.6□□□□□ -1.19
CDHR3-213ENST00000488386 HOXA10P31260 410 aaPredicted RBP7.6□□□□□ -1.19
CDHR3-213ENST00000488386 AOC3Q16853 763 aa7.6□□□□□ -1.19
CDHR3-213ENST00000488386 HSP90AB3PQ58FF7 597 aa7.6□□□□□ -1.19
CDHR3-213ENST00000488386 SLC10A5Q5PT55 438 aa7.6□□□□□ -1.19
CDHR3-213ENST00000488386 SOGA3Q5TF21 947 aa7.6□□□□□ -1.19
CDHR3-213ENST00000488386 B4GALNT3Q6L9W6 998 aa7.6□□□□□ -1.19
CDHR3-213ENST00000488386 RTKN2Q8IZC4 609 aa7.6□□□□□ -1.19
CDHR3-213ENST00000488386 CELF1Q92879 486 aaKnown RBP7.6□□□□□ -1.19
CDHR3-213ENST00000488386 ACDQ96AP0 544 aa7.6□□□□□ -1.19
CDHR3-213ENST00000488386 GPR101Q96P66 508 aaPredicted RBP7.6□□□□□ -1.19
CDHR3-213ENST00000488386 HYPKQ9NX55 129 aa7.6□□□□□ -1.19
CDHR3-213ENST00000488386 STIM2Q9P246 746 aa7.6□□□□□ -1.19
CDHR3-213ENST00000488386 LTBP1Q14766 1721 aa7.6□□□□□ -1.19
CDHR3-213ENST00000488386 CEP350Q5VT06 3117 aa7.6□□□□□ -1.19
CDHR3-213ENST00000488386 FANCIQ9NVI1 1328 aa7.59□□□□□ -1.19
CDHR3-213ENST00000488386 ABL1P00519 1130 aa7.59□□□□□ -1.19
CDHR3-213ENST00000488386 MPSTP25325 297 aa7.59□□□□□ -1.19
CDHR3-213ENST00000488386 BRD2P25440 801 aaKnown RBP7.59□□□□□ -1.19
CDHR3-213ENST00000488386 LAMC2Q13753 1193 aa7.59□□□□□ -1.19
CDHR3-213ENST00000488386 EAPPQ56P03 285 aaPredicted RBP7.59□□□□□ -1.19
CDHR3-213ENST00000488386 SMC1BQ8NDV3 1235 aa7.59□□□□□ -1.19
CDHR3-213ENST00000488386 CRAMP1Q96RY5 1269 aa7.59□□□□□ -1.19
CDHR3-213ENST00000488386 TRAIPQ9BWF2 469 aa7.59□□□□□ -1.19
CDHR3-213ENST00000488386 KLF15Q9UIH9 416 aa7.59□□□□□ -1.19
CDHR3-213ENST00000488386 KCNH4Q9UQ05 1017 aa7.59□□□□□ -1.19
CDHR3-213ENST00000488386 MAP3K2Q9Y2U5 619 aa7.59□□□□□ -1.19
CDHR3-213ENST00000488386 SPEF2Q9C093 1822 aa7.59□□□□□ -1.19
CDHR3-213ENST00000488386 IRS4O14654 1257 aaPredicted RBP7.58□□□□□ -1.2
CDHR3-213ENST00000488386 PPIP5K2O43314 1243 aa7.58□□□□□ -1.2
CDHR3-213ENST00000488386 ARSDP51689 593 aa7.58□□□□□ -1.2
CDHR3-213ENST00000488386 CALD1Q05682 793 aaKnown RBP7.58□□□□□ -1.2
CDHR3-213ENST00000488386 EXOSC9Q06265 439 aaKnown RBP7.58□□□□□ -1.2
CDHR3-213ENST00000488386 SPEM2Q0P670 501 aa7.58□□□□□ -1.2
CDHR3-213ENST00000488386 GRAPQ13588 217 aa7.58□□□□□ -1.2
CDHR3-213ENST00000488386 CWF19L2Q2TBE0 894 aaKnown RBP7.58□□□□□ -1.2
CDHR3-213ENST00000488386 TWISTNBQ3B726 338 aaPredicted RBP7.58□□□□□ -1.2
CDHR3-213ENST00000488386 ZNF385CQ66K41 422 aaPredicted RBP7.58□□□□□ -1.2
CDHR3-213ENST00000488386 LYPD4Q6UWN0 246 aa7.58□□□□□ -1.2
CDHR3-213ENST00000488386 C1orf229Q6ZS94 237 aaPredicted RBP7.58□□□□□ -1.2
CDHR3-213ENST00000488386 DDX46Q7L014 1031 aaKnown RBP7.58□□□□□ -1.2
CDHR3-213ENST00000488386 ATCAYQ86WG3 371 aa7.58□□□□□ -1.2
CDHR3-213ENST00000488386 RGL4Q8IZJ4 473 aa7.58□□□□□ -1.2
CDHR3-213ENST00000488386 GRAPLQ8TC17 118 aaPredicted RBP7.58□□□□□ -1.2
CDHR3-213ENST00000488386 PSMD1Q99460 953 aa7.58□□□□□ -1.2
CDHR3-213ENST00000488386 SEC31BQ9NQW1 1179 aa7.58□□□□□ -1.2
CDHR3-213ENST00000488386 ATP6V0A2Q9Y487 856 aa7.58□□□□□ -1.2
CDHR3-213ENST00000488386 DUOX1Q9NRD9 1551 aa7.58□□□□□ -1.2
CDHR3-213ENST00000488386 PI4KAP2A4QPH2 592 aa7.57□□□□□ -1.2
CDHR3-213ENST00000488386 FZD9O00144 591 aa7.57□□□□□ -1.2
CDHR3-213ENST00000488386 BRD1O95696 1058 aa7.57□□□□□ -1.2
CDHR3-213ENST00000488386 IGKV5-2P06315 115 aa7.57□□□□□ -1.2
CDHR3-213ENST00000488386 ZAP70P43403 619 aa7.57□□□□□ -1.2
CDHR3-213ENST00000488386 MAP2K3P46734 347 aa7.57□□□□□ -1.2
CDHR3-213ENST00000488386 FMR1Q06787 632 aaKnown RBP eCLIP7.57□□□□□ -1.2
CDHR3-213ENST00000488386 PDE4CQ08493 712 aa7.57□□□□□ -1.2
CDHR3-213ENST00000488386 FSTL1Q12841 308 aa7.57□□□□□ -1.2
CDHR3-213ENST00000488386 CCDC27Q2M243 656 aa7.57□□□□□ -1.2
CDHR3-213ENST00000488386 CCDC30Q5VVM6 783 aa7.57□□□□□ -1.2
CDHR3-213ENST00000488386 DPP8Q6V1X1 898 aaPredicted RBP7.57□□□□□ -1.2
CDHR3-213ENST00000488386 DNAJC5GQ8N7S2 189 aa7.57□□□□□ -1.2
CDHR3-213ENST00000488386 PI4KAP1Q8N8J0 262 aa7.57□□□□□ -1.2
CDHR3-213ENST00000488386 JDP2Q8WYK2 163 aa7.57□□□□□ -1.2
CDHR3-213ENST00000488386 TAF1DQ9H5J8 278 aaPredicted RBP7.57□□□□□ -1.2
CDHR3-213ENST00000488386 LRRC37AA6NMS7 1700 aa7.57□□□□□ -1.2
CDHR3-213ENST00000488386 SCN4AP35499 1836 aa7.57□□□□□ -1.2
CDHR3-213ENST00000488386 SHTN1A0MZ66 631 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms