RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 AS3MTQ9HBK9 375 aa13.1□□□□□ -0.31
UBE4B-210ENST00000488228 ZNF287Q9HBT7 754 aa13.1□□□□□ -0.31
UBE4B-210ENST00000488228 GINM1Q9NU53 330 aa13.1□□□□□ -0.31
UBE4B-210ENST00000488228 COL11A1P12107 1806 aaPredicted RBP13.1□□□□□ -0.31
UBE4B-210ENST00000488228 A0A0G2JLL6 359 aaPredicted RBP13.09□□□□□ -0.31
UBE4B-210ENST00000488228 NMT2O60551 498 aa13.09□□□□□ -0.31
UBE4B-210ENST00000488228 FGRP09769 529 aa13.09□□□□□ -0.31
UBE4B-210ENST00000488228 TSPY3P0CV98 308 aa13.09□□□□□ -0.31
UBE4B-210ENST00000488228 TSPY8P0CW00 308 aa13.09□□□□□ -0.31
UBE4B-210ENST00000488228 ATP2B2Q01814 1243 aa13.09□□□□□ -0.31
UBE4B-210ENST00000488228 MOGSQ13724 837 aa13.09□□□□□ -0.31
UBE4B-210ENST00000488228 GADL1Q6ZQY3 521 aa13.09□□□□□ -0.31
UBE4B-210ENST00000488228 MFSD6Q6ZSS7 791 aa13.09□□□□□ -0.31
UBE4B-210ENST00000488228 STOX1Q6ZVD7 989 aa13.09□□□□□ -0.31
UBE4B-210ENST00000488228 PRRT2Q7Z6L0 340 aaPredicted RBP13.09□□□□□ -0.31
UBE4B-210ENST00000488228 ZNF444Q8N0Y2 327 aaPredicted RBP13.09□□□□□ -0.31
UBE4B-210ENST00000488228 PTPN18Q99952 460 aa13.09□□□□□ -0.31
UBE4B-210ENST00000488228 WDR18Q9BV38 432 aa13.09□□□□□ -0.31
UBE4B-210ENST00000488228 IGKV6D-41A0A0C4DH26 115 aa13.08□□□□□ -0.32
UBE4B-210ENST00000488228 TSPY2A6NKD2 308 aa13.08□□□□□ -0.32
UBE4B-210ENST00000488228 B4E1Z4 1266 aa13.08□□□□□ -0.32
UBE4B-210ENST00000488228 CXCL11O14625 94 aa13.08□□□□□ -0.32
UBE4B-210ENST00000488228 CETPP11597 493 aa13.08□□□□□ -0.32
UBE4B-210ENST00000488228 TFAP4Q01664 338 aa13.08□□□□□ -0.32
UBE4B-210ENST00000488228 FAM43AQ8N2R8 423 aa13.08□□□□□ -0.32
UBE4B-210ENST00000488228 CEP95Q96GE4 821 aa13.08□□□□□ -0.32
UBE4B-210ENST00000488228 TBC1D2Q9BYX2 928 aa13.08□□□□□ -0.32
UBE4B-210ENST00000488228 RNF41Q9H4P4 317 aaPredicted RBP13.08□□□□□ -0.32
UBE4B-210ENST00000488228 TSKSQ9UJT2 592 aa13.08□□□□□ -0.32
UBE4B-210ENST00000488228 MGAMO43451 1857 aa13.08□□□□□ -0.32
UBE4B-210ENST00000488228 CASP8AP2Q9UKL3 1982 aa13.07□□□□□ -0.32
UBE4B-210ENST00000488228 A0A1W2PRG0 241 aa13.07□□□□□ -0.32
UBE4B-210ENST00000488228 TESPA1A2RU30 521 aaPredicted RBP13.07□□□□□ -0.32
UBE4B-210ENST00000488228 BTBD19C9JJ37 291 aa13.07□□□□□ -0.32
UBE4B-210ENST00000488228 SLC27A2O14975 620 aa13.07□□□□□ -0.32
UBE4B-210ENST00000488228 KDM4AO75164 1064 aa13.07□□□□□ -0.32
UBE4B-210ENST00000488228 EEF2P13639 858 aaKnown RBP13.07□□□□□ -0.32
UBE4B-210ENST00000488228 BACE1P56817 501 aa13.07□□□□□ -0.32
UBE4B-210ENST00000488228 TREML2Q5T2D2 321 aa13.07□□□□□ -0.32
UBE4B-210ENST00000488228 CREB3L3Q68CJ9 461 aa13.07□□□□□ -0.32
UBE4B-210ENST00000488228 IFNL1Q8IU54 200 aa13.07□□□□□ -0.32
UBE4B-210ENST00000488228 SIAH1Q8IUQ4 282 aa13.07□□□□□ -0.32
UBE4B-210ENST00000488228 LRRC47Q8N1G4 583 aaKnown RBP13.07□□□□□ -0.32
UBE4B-210ENST00000488228 NEDD1Q8NHV4 660 aa13.07□□□□□ -0.32
UBE4B-210ENST00000488228 USP17L10C9JJH3 530 aa13.06□□□□□ -0.32
UBE4B-210ENST00000488228 REC8O95072 547 aa13.06□□□□□ -0.32
UBE4B-210ENST00000488228 HSPA1AP0DMV8 641 aaKnown RBP13.06□□□□□ -0.32
UBE4B-210ENST00000488228 HSPA1BP0DMV9 641 aaKnown RBP13.06□□□□□ -0.32
UBE4B-210ENST00000488228 PCP11498 1178 aaKnown RBP13.06□□□□□ -0.32
UBE4B-210ENST00000488228 TM4SF4P48230 202 aa13.06□□□□□ -0.32
UBE4B-210ENST00000488228 MAP2K1Q02750 393 aaPredicted RBP13.06□□□□□ -0.32
UBE4B-210ENST00000488228 GPAT2Q6NUI2 795 aa13.06□□□□□ -0.32
UBE4B-210ENST00000488228 KIAA1683Q9H0B3 1180 aa13.06□□□□□ -0.32
UBE4B-210ENST00000488228 KANSL2Q9H9L4 492 aa13.06□□□□□ -0.32
UBE4B-210ENST00000488228 ARHGEF10LQ9HCE6 1279 aa13.06□□□□□ -0.32
UBE4B-210ENST00000488228 IL17RBQ9NRM6 502 aa13.06□□□□□ -0.32
UBE4B-210ENST00000488228 EMILIN3Q9NT22 766 aa13.06□□□□□ -0.32
UBE4B-210ENST00000488228 WBP1LQ9NX94 342 aa13.06□□□□□ -0.32
UBE4B-210ENST00000488228 RNF186Q9NXI6 227 aa13.06□□□□□ -0.32
UBE4B-210ENST00000488228 E7EWF7 191 aa13.05□□□□□ -0.32
UBE4B-210ENST00000488228 TRPA1O75762 1119 aa13.05□□□□□ -0.32
UBE4B-210ENST00000488228 COL9A3Q14050 684 aaPredicted RBP13.05□□□□□ -0.32
UBE4B-210ENST00000488228 NECTIN1Q15223 517 aa13.05□□□□□ -0.32
UBE4B-210ENST00000488228 C8orf34Q49A92 452 aa13.05□□□□□ -0.32
UBE4B-210ENST00000488228 SH3D19Q5HYK7 790 aa13.05□□□□□ -0.32
UBE4B-210ENST00000488228 KIAA1755Q5JYT7 1200 aa13.05□□□□□ -0.32
UBE4B-210ENST00000488228 RASGRP2Q7LDG7 609 aa13.05□□□□□ -0.32
UBE4B-210ENST00000488228 REM2Q8IYK8 340 aaPredicted RBP13.05□□□□□ -0.32
UBE4B-210ENST00000488228 PROCA1Q8NCQ7 364 aaPredicted RBP13.05□□□□□ -0.32
UBE4B-210ENST00000488228 ESR2Q92731 530 aa13.05□□□□□ -0.32
UBE4B-210ENST00000488228 ZKSCAN3Q9BRR0 538 aa13.05□□□□□ -0.32
UBE4B-210ENST00000488228 CNNM2Q9H8M5 875 aa13.05□□□□□ -0.32
UBE4B-210ENST00000488228 MTMR4Q9NYA4 1195 aa13.05□□□□□ -0.32
UBE4B-210ENST00000488228 TMOD4Q9NZQ9 345 aa13.05□□□□□ -0.32
UBE4B-210ENST00000488228 MYH6P13533 1939 aa13.05□□□□□ -0.32
UBE4B-210ENST00000488228 PDHXO00330 501 aa13.04□□□□□ -0.32
UBE4B-210ENST00000488228 RAD21O60216 631 aa13.04□□□□□ -0.32
UBE4B-210ENST00000488228 VCAM1P19320 739 aa13.04□□□□□ -0.32
UBE4B-210ENST00000488228 INHBEP58166 350 aa13.04□□□□□ -0.32
UBE4B-210ENST00000488228 CRHR2Q13324 411 aa13.04□□□□□ -0.32
UBE4B-210ENST00000488228 TAF1CQ15572 869 aaPredicted RBP13.04□□□□□ -0.32
UBE4B-210ENST00000488228 USP17L2Q6R6M4 530 aa13.04□□□□□ -0.32
UBE4B-210ENST00000488228 CYB5R4Q7L1T6 521 aa13.04□□□□□ -0.32
UBE4B-210ENST00000488228 FASTKD5Q7L8L6 764 aaKnown RBP13.04□□□□□ -0.32
UBE4B-210ENST00000488228 RALYLQ86SE5 291 aaKnown RBP13.04□□□□□ -0.32
UBE4B-210ENST00000488228 ANKRD23Q86SG2 305 aa13.04□□□□□ -0.32
UBE4B-210ENST00000488228 RASEFQ8IZ41 740 aa13.04□□□□□ -0.32
UBE4B-210ENST00000488228 SPICE1Q8N0Z3 855 aa13.04□□□□□ -0.32
UBE4B-210ENST00000488228 BEGAINQ9BUH8 593 aa13.04□□□□□ -0.32
UBE4B-210ENST00000488228 KRT23Q9C075 422 aa13.04□□□□□ -0.32
UBE4B-210ENST00000488228 R3HDMLQ9H3Y0 253 aa13.04□□□□□ -0.32
UBE4B-210ENST00000488228 SH2D4AQ9H788 454 aa13.04□□□□□ -0.32
UBE4B-210ENST00000488228 NYAP2Q9P242 653 aa13.04□□□□□ -0.32
UBE4B-210ENST00000488228 STX8Q9UNK0 236 aa13.04□□□□□ -0.32
UBE4B-210ENST00000488228 AGTPBP1Q9UPW5 1226 aa13.04□□□□□ -0.32
UBE4B-210ENST00000488228 TMX2Q9Y320 296 aa13.04□□□□□ -0.32
UBE4B-210ENST00000488228 C19orf81C9J6K1 198 aa13.03□□□□□ -0.32
UBE4B-210ENST00000488228 FOXN1O15353 648 aa13.03□□□□□ -0.32
UBE4B-210ENST00000488228 TTLL1O95922 423 aa13.03□□□□□ -0.32
UBE4B-210ENST00000488228 CYP2C8P10632 490 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms