RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 GOLGA2P5Q9HBQ8 144 aa6.07□□□□□ -1.44
ECHDC1-217ENST00000488087 PPP1R1BQ9UD71 204 aaPredicted RBP6.07□□□□□ -1.44
ECHDC1-217ENST00000488087 TPX2Q9ULW0 747 aaKnown RBP6.07□□□□□ -1.44
ECHDC1-217ENST00000488087 MEIS3P2A8K0S8 358 aa6.06□□□□□ -1.44
ECHDC1-217ENST00000488087 SLITRK5O94991 958 aa6.06□□□□□ -1.44
ECHDC1-217ENST00000488087 NME1P15531 152 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-217ENST00000488087 ATP2B1P20020 1258 aa6.06□□□□□ -1.44
ECHDC1-217ENST00000488087 OGFOD3Q6PK18 319 aa6.06□□□□□ -1.44
ECHDC1-217ENST00000488087 ZNF765Q7L2R6 523 aa6.06□□□□□ -1.44
ECHDC1-217ENST00000488087 LSRQ86X29 649 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-217ENST00000488087 SHISA5Q8N114 240 aa6.06□□□□□ -1.44
ECHDC1-217ENST00000488087 GATA6Q92908 595 aa6.06□□□□□ -1.44
ECHDC1-217ENST00000488087 SHDQ96IW2 340 aa6.06□□□□□ -1.44
ECHDC1-217ENST00000488087 KIF2CQ99661 725 aa6.06□□□□□ -1.44
ECHDC1-217ENST00000488087 METTL22Q9BUU2 404 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-217ENST00000488087 CNNM2Q9H8M5 875 aa6.06□□□□□ -1.44
ECHDC1-217ENST00000488087 FAM86C2PA6NEL3 165 aa6.05□□□□□ -1.44
ECHDC1-217ENST00000488087 POLR2BP30876 1174 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-217ENST00000488087 ETV3P41162 512 aa6.05□□□□□ -1.44
ECHDC1-217ENST00000488087 GIPRP48546 466 aa6.05□□□□□ -1.44
ECHDC1-217ENST00000488087 PPP2R5EQ16537 467 aa6.05□□□□□ -1.44
ECHDC1-217ENST00000488087 PRSS36Q5K4E3 855 aa6.05□□□□□ -1.44
ECHDC1-217ENST00000488087 ARTNQ5T4W7 220 aa6.05□□□□□ -1.44
ECHDC1-217ENST00000488087 CDCP2Q5VXM1 449 aa6.05□□□□□ -1.44
ECHDC1-217ENST00000488087 ZNF746Q6NUN9 644 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-217ENST00000488087 RUFY4Q6ZNE9 571 aa6.05□□□□□ -1.44
ECHDC1-217ENST00000488087 ARHGAP27Q6ZUM4 889 aa6.05□□□□□ -1.44
ECHDC1-217ENST00000488087 CDH24Q86UP0 819 aa6.05□□□□□ -1.44
ECHDC1-217ENST00000488087 SLC51AQ86UW1 340 aa6.05□□□□□ -1.44
ECHDC1-217ENST00000488087 RBBP8NLQ8NC74 664 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-217ENST00000488087 OR6P1Q8NGX9 317 aa6.05□□□□□ -1.44
ECHDC1-217ENST00000488087 RIN3Q8TB24 985 aa6.05□□□□□ -1.44
ECHDC1-217ENST00000488087 BAHD1Q8TBE0 780 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-217ENST00000488087 SREK1Q8WXA9 508 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-217ENST00000488087 TM9SF2Q99805 663 aa6.05□□□□□ -1.44
ECHDC1-217ENST00000488087 GTF2IRD1Q9UHL9 959 aa6.05□□□□□ -1.44
ECHDC1-217ENST00000488087 RGS13O14921 159 aa6.04□□□□□ -1.44
ECHDC1-217ENST00000488087 GUCY2CP25092 1073 aa6.04□□□□□ -1.44
ECHDC1-217ENST00000488087 GTF2F1P35269 517 aaKnown RBP eCLIP6.04□□□□□ -1.44
ECHDC1-217ENST00000488087 ZNF408Q9H9D4 720 aa6.04□□□□□ -1.44
ECHDC1-217ENST00000488087 LRRC4CQ9HCJ2 640 aa6.04□□□□□ -1.44
ECHDC1-217ENST00000488087 PRDM5Q9NQX1 630 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-217ENST00000488087 LEMD3Q9Y2U8 911 aa6.04□□□□□ -1.44
ECHDC1-217ENST00000488087 R3HCC1Q9Y3T6 440 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-217ENST00000488087 STK10O94804 968 aaKnown RBP6.03□□□□□ -1.44
ECHDC1-217ENST00000488087 EOMESO95936 686 aa6.03□□□□□ -1.44
ECHDC1-217ENST00000488087 CYP7A1P22680 504 aa6.03□□□□□ -1.44
ECHDC1-217ENST00000488087 KRTAP19-1Q8IUB9 90 aa6.03□□□□□ -1.44
ECHDC1-217ENST00000488087 ZDHHC13Q8IUH4 622 aa6.03□□□□□ -1.44
ECHDC1-217ENST00000488087 SLC9A7Q96T83 725 aa6.03□□□□□ -1.44
ECHDC1-217ENST00000488087 CEP131Q9UPN4 1083 aa6.03□□□□□ -1.44
ECHDC1-217ENST00000488087 GNAT3A8MTJ3 354 aa6.02□□□□□ -1.45
ECHDC1-217ENST00000488087 TNFRSF10CO14798 259 aa6.02□□□□□ -1.45
ECHDC1-217ENST00000488087 SMAD7O15105 426 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-217ENST00000488087 CYP26A1O43174 497 aa6.02□□□□□ -1.45
ECHDC1-217ENST00000488087 CLEC3AO75596 197 aa6.02□□□□□ -1.45
ECHDC1-217ENST00000488087 ACRP10323 421 aa6.02□□□□□ -1.45
ECHDC1-217ENST00000488087 ETFBP38117 255 aa6.02□□□□□ -1.45
ECHDC1-217ENST00000488087 CCNFP41002 786 aa6.02□□□□□ -1.45
ECHDC1-217ENST00000488087 CPSF6Q16630 551 aaKnown RBP eCLIP6.02□□□□□ -1.45
ECHDC1-217ENST00000488087 TNNI3KQ59H18 835 aa6.02□□□□□ -1.45
ECHDC1-217ENST00000488087 SFRP5Q5T4F7 317 aa6.02□□□□□ -1.45
ECHDC1-217ENST00000488087 INTS3Q68E01 1043 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-217ENST00000488087 TTC6Q86TZ1 520 aa6.02□□□□□ -1.45
ECHDC1-217ENST00000488087 FAM169BQ8N8A8 192 aa6.02□□□□□ -1.45
ECHDC1-217ENST00000488087 DNAJB8Q8NHS0 232 aa6.02□□□□□ -1.45
ECHDC1-217ENST00000488087 PPP1R13LQ8WUF5 828 aa6.02□□□□□ -1.45
ECHDC1-217ENST00000488087 DHX38Q92620 1227 aaKnown RBP6.02□□□□□ -1.45
ECHDC1-217ENST00000488087 KRTAP17-1Q9BYP8 105 aa6.02□□□□□ -1.45
ECHDC1-217ENST00000488087 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.02□□□□□ -1.45
ECHDC1-217ENST00000488087 PIM2Q9P1W9 311 aa6.02□□□□□ -1.45
ECHDC1-217ENST00000488087 UBOX5O94941 541 aa6.01□□□□□ -1.45
ECHDC1-217ENST00000488087 CBX7O95931 251 aa6.01□□□□□ -1.45
ECHDC1-217ENST00000488087 TGFB1P01137 390 aa6.01□□□□□ -1.45
ECHDC1-217ENST00000488087 UNC5AQ6ZN44 842 aa6.01□□□□□ -1.45
ECHDC1-217ENST00000488087 TAB3Q8N5C8 712 aaPredicted RBP6.01□□□□□ -1.45
ECHDC1-217ENST00000488087 FAM181AQ8N9Y4 354 aa6.01□□□□□ -1.45
ECHDC1-217ENST00000488087 DHRS1Q96LJ7 313 aa6.01□□□□□ -1.45
ECHDC1-217ENST00000488087 DRC1Q96MC2 740 aa6.01□□□□□ -1.45
ECHDC1-217ENST00000488087 SLC6A18Q96N87 628 aa6.01□□□□□ -1.45
ECHDC1-217ENST00000488087 ACTR10Q9NZ32 417 aa6.01□□□□□ -1.45
ECHDC1-217ENST00000488087 PRKAG3Q9UGI9 489 aa6.01□□□□□ -1.45
ECHDC1-217ENST00000488087 MAPK8IP1Q9UQF2 711 aa6.01□□□□□ -1.45
ECHDC1-217ENST00000488087 SLC12A7Q9Y666 1083 aa6.01□□□□□ -1.45
ECHDC1-217ENST00000488087 ITIH2P19823 946 aa6□□□□□ -1.45
ECHDC1-217ENST00000488087 ZYXQ15942 572 aaKnown RBP6□□□□□ -1.45
ECHDC1-217ENST00000488087 ANKS3Q6ZW76 656 aa6□□□□□ -1.45
ECHDC1-217ENST00000488087 CKAP2LQ8IYA6 745 aa6□□□□□ -1.45
ECHDC1-217ENST00000488087 C19orf47Q8N9M1 422 aaKnown RBP6□□□□□ -1.45
ECHDC1-217ENST00000488087 RNF141Q8WVD5 230 aa6□□□□□ -1.45
ECHDC1-217ENST00000488087 COX4I2Q96KJ9 171 aa6□□□□□ -1.45
ECHDC1-217ENST00000488087 HEXIM2Q96MH2 286 aaKnown RBP6□□□□□ -1.45
ECHDC1-217ENST00000488087 KREMEN1Q96MU8 473 aa6□□□□□ -1.45
ECHDC1-217ENST00000488087 USP35Q9P2H5 1018 aa6□□□□□ -1.45
ECHDC1-217ENST00000488087 A0A1W2PQH9 124 aa5.99□□□□□ -1.45
ECHDC1-217ENST00000488087 PRR19A6NJB7 356 aa5.99□□□□□ -1.45
ECHDC1-217ENST00000488087 FAM155AB1AL88 458 aaPredicted RBP5.99□□□□□ -1.45
ECHDC1-217ENST00000488087 IGF2BP3O00425 579 aaKnown RBP eCLIP5.99□□□□□ -1.45
ECHDC1-217ENST00000488087 GRIK1P39086 918 aa5.99□□□□□ -1.45
ECHDC1-217ENST00000488087 RNF4P78317 190 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms