RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 ATP2B2Q01814 1243 aa4.9□□□□□ -1.63
R3HDM1-219ENST00000488035 MRPL58Q14197 206 aaKnown RBP4.9□□□□□ -1.63
R3HDM1-219ENST00000488035 NFIXQ14938 502 aa4.9□□□□□ -1.63
R3HDM1-219ENST00000488035 LRRC14Q15048 493 aa4.9□□□□□ -1.63
R3HDM1-219ENST00000488035 ZNF326Q5BKZ1 582 aaKnown RBP4.9□□□□□ -1.63
R3HDM1-219ENST00000488035 LDLRAD1Q5T700 205 aa4.9□□□□□ -1.63
R3HDM1-219ENST00000488035 TCERG1LQ5VWI1 586 aa4.9□□□□□ -1.63
R3HDM1-219ENST00000488035 ALG1LQ6GMV1 187 aa4.9□□□□□ -1.63
R3HDM1-219ENST00000488035 MFSD2AQ8NA29 543 aa4.9□□□□□ -1.63
R3HDM1-219ENST00000488035 CXorf38Q8TB03 319 aa4.9□□□□□ -1.63
R3HDM1-219ENST00000488035 ELMO3Q96BJ8 720 aa4.9□□□□□ -1.63
R3HDM1-219ENST00000488035 BORCS6Q96GS4 357 aa4.9□□□□□ -1.63
R3HDM1-219ENST00000488035 KCNC2Q96PR1 638 aa4.9□□□□□ -1.63
R3HDM1-219ENST00000488035 RTEL1Q9NZ71 1219 aa4.9□□□□□ -1.63
R3HDM1-219ENST00000488035 ZSWIM5Q9P217 1185 aa4.9□□□□□ -1.63
R3HDM1-219ENST00000488035 RECKO95980 971 aa4.89□□□□□ -1.63
R3HDM1-219ENST00000488035 GNA15P30679 374 aa4.89□□□□□ -1.63
R3HDM1-219ENST00000488035 KIR3DL1P43629 444 aa4.89□□□□□ -1.63
R3HDM1-219ENST00000488035 HK2P52789 917 aa4.89□□□□□ -1.63
R3HDM1-219ENST00000488035 DLG4P78352 724 aa4.89□□□□□ -1.63
R3HDM1-219ENST00000488035 ZNF385BQ569K4 471 aa4.89□□□□□ -1.63
R3HDM1-219ENST00000488035 ERICH6BQ5W0A0 696 aa4.89□□□□□ -1.63
R3HDM1-219ENST00000488035 NXPE4Q6UWF7 544 aa4.89□□□□□ -1.63
R3HDM1-219ENST00000488035 TMC4Q7Z404 712 aa4.89□□□□□ -1.63
R3HDM1-219ENST00000488035 IRF2BP1Q8IU81 584 aa4.89□□□□□ -1.63
R3HDM1-219ENST00000488035 TMEM151BQ8IW70 566 aa4.89□□□□□ -1.63
R3HDM1-219ENST00000488035 FBF1Q8TES7 1133 aa4.89□□□□□ -1.63
R3HDM1-219ENST00000488035 MIPEPQ99797 713 aa4.89□□□□□ -1.63
R3HDM1-219ENST00000488035 BCO2Q9BYV7 579 aa4.89□□□□□ -1.63
R3HDM1-219ENST00000488035 CEP44Q9C0F1 390 aa4.89□□□□□ -1.63
R3HDM1-219ENST00000488035 SLC6A17Q9H1V8 727 aa4.89□□□□□ -1.63
R3HDM1-219ENST00000488035 PCDHA4Q9UN74 947 aa4.89□□□□□ -1.63
R3HDM1-219ENST00000488035 DNAJC25-GNG10A0A024R161 153 aa4.88□□□□□ -1.63
R3HDM1-219ENST00000488035 RFXAPO00287 272 aa4.88□□□□□ -1.63
R3HDM1-219ENST00000488035 PEX10O60683 326 aa4.88□□□□□ -1.63
R3HDM1-219ENST00000488035 CBX7O95931 251 aa4.88□□□□□ -1.63
R3HDM1-219ENST00000488035 CTSHP09668 335 aa4.88□□□□□ -1.63
R3HDM1-219ENST00000488035 CAP2P40123 477 aa4.88□□□□□ -1.63
R3HDM1-219ENST00000488035 RALGPS1Q5JS13 557 aa4.88□□□□□ -1.63
R3HDM1-219ENST00000488035 LLGL2Q6P1M3 1020 aa4.88□□□□□ -1.63
R3HDM1-219ENST00000488035 NECAB3Q96P71 396 aaPredicted RBP4.88□□□□□ -1.63
R3HDM1-219ENST00000488035 CNOT6Q9ULM6 557 aaKnown RBP4.88□□□□□ -1.63
R3HDM1-219ENST00000488035 XPCQ01831 940 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-219ENST00000488035 PSMD2Q13200 908 aa4.87□□□□□ -1.63
R3HDM1-219ENST00000488035 TMEM132EQ6IEE7 984 aa4.87□□□□□ -1.63
R3HDM1-219ENST00000488035 LETMD1Q6P1Q0 360 aa4.87□□□□□ -1.63
R3HDM1-219ENST00000488035 MPRIPQ6WCQ1 1025 aa4.87□□□□□ -1.63
R3HDM1-219ENST00000488035 LILRA2Q8N149 483 aa4.87□□□□□ -1.63
R3HDM1-219ENST00000488035 MARCH10Q8NA82 808 aaPredicted RBP4.87□□□□□ -1.63
R3HDM1-219ENST00000488035 PIWIL2Q8TC59 973 aaKnown RBP4.87□□□□□ -1.63
R3HDM1-219ENST00000488035 GRIN3AQ8TCU5 1115 aa4.87□□□□□ -1.63
R3HDM1-219ENST00000488035 C12orf49Q9H741 205 aa4.87□□□□□ -1.63
R3HDM1-219ENST00000488035 ESR1P03372 595 aa4.86□□□□□ -1.63
R3HDM1-219ENST00000488035 BMP6P22004 513 aa4.86□□□□□ -1.63
R3HDM1-219ENST00000488035 ERVFC1P60507 584 aa4.86□□□□□ -1.63
R3HDM1-219ENST00000488035 SLBPQ14493 270 aaKnown RBP eCLIP4.86□□□□□ -1.63
R3HDM1-219ENST00000488035 HDXQ7Z353 690 aa4.86□□□□□ -1.63
R3HDM1-219ENST00000488035 OXR1Q8N573 874 aa4.86□□□□□ -1.63
R3HDM1-219ENST00000488035 PDZD8Q8NEN9 1154 aa4.86□□□□□ -1.63
R3HDM1-219ENST00000488035 BACH2Q9BYV9 841 aa4.86□□□□□ -1.63
R3HDM1-219ENST00000488035 MCOLN1Q9GZU1 580 aa4.86□□□□□ -1.63
R3HDM1-219ENST00000488035 RNF32Q9H0A6 362 aa4.86□□□□□ -1.63
R3HDM1-219ENST00000488035 CWC22Q9HCG8 908 aaKnown RBP4.86□□□□□ -1.63
R3HDM1-219ENST00000488035 CYP8B1Q9UNU6 501 aa4.86□□□□□ -1.63
R3HDM1-219ENST00000488035 SPG7Q9UQ90 795 aa4.86□□□□□ -1.63
R3HDM1-219ENST00000488035 AK5Q9Y6K8 562 aa4.86□□□□□ -1.63
R3HDM1-219ENST00000488035 CNTNAP4Q9C0A0 1308 aa4.86□□□□□ -1.63
R3HDM1-219ENST00000488035 TEX51A0A1B0GUA7 166 aa4.85□□□□□ -1.63
R3HDM1-219ENST00000488035 PRAMEF27A3QJZ7 478 aa4.85□□□□□ -1.63
R3HDM1-219ENST00000488035 SORBS3O60504 671 aa4.85□□□□□ -1.63
R3HDM1-219ENST00000488035 SASH1O94885 1247 aa4.85□□□□□ -1.63
R3HDM1-219ENST00000488035 USP17L7P0C7H9 530 aa4.85□□□□□ -1.63
R3HDM1-219ENST00000488035 KRTAP1-1Q07627 177 aa4.85□□□□□ -1.63
R3HDM1-219ENST00000488035 TSNAXIP1Q2TAA8 658 aa4.85□□□□□ -1.63
R3HDM1-219ENST00000488035 SKOR2Q2VWA4 1001 aaPredicted RBP4.85□□□□□ -1.63
R3HDM1-219ENST00000488035 MEI1Q5TIA1 1274 aa4.85□□□□□ -1.63
R3HDM1-219ENST00000488035 CREG2Q8IUH2 290 aa4.85□□□□□ -1.63
R3HDM1-219ENST00000488035 HID1Q8IV36 788 aa4.85□□□□□ -1.63
R3HDM1-219ENST00000488035 C3orf58Q8NDZ4 430 aa4.85□□□□□ -1.63
R3HDM1-219ENST00000488035 SYTL4Q96C24 671 aaPredicted RBP4.85□□□□□ -1.63
R3HDM1-219ENST00000488035 WNT10AQ9GZT5 417 aa4.85□□□□□ -1.63
R3HDM1-219ENST00000488035 ADAMTS10Q9H324 1103 aa4.85□□□□□ -1.63
R3HDM1-219ENST00000488035 TRIT1Q9H3H1 467 aaKnown RBP4.85□□□□□ -1.63
R3HDM1-219ENST00000488035 VTI1BQ9UEU0 232 aa4.85□□□□□ -1.63
R3HDM1-219ENST00000488035 PPM1HQ9ULR3 514 aa4.85□□□□□ -1.63
R3HDM1-219ENST00000488035 KCTD3Q9Y597 815 aa4.85□□□□□ -1.63
R3HDM1-219ENST00000488035 FITM1A5D6W6 292 aa4.84□□□□□ -1.63
R3HDM1-219ENST00000488035 E9PSI1 815 aa4.84□□□□□ -1.63
R3HDM1-219ENST00000488035 EIF4BP23588 611 aaKnown RBP4.84□□□□□ -1.63
R3HDM1-219ENST00000488035 VAMP1P23763 118 aa4.84□□□□□ -1.63
R3HDM1-219ENST00000488035 GSTT1P30711 240 aa4.84□□□□□ -1.63
R3HDM1-219ENST00000488035 ETF1P62495 437 aaKnown RBP4.84□□□□□ -1.63
R3HDM1-219ENST00000488035 TNK2Q07912 1038 aa4.84□□□□□ -1.63
R3HDM1-219ENST00000488035 TPTE2Q6XPS3 522 aa4.84□□□□□ -1.63
R3HDM1-219ENST00000488035 PRRT2Q7Z6L0 340 aaPredicted RBP4.84□□□□□ -1.63
R3HDM1-219ENST00000488035 ZNF605Q86T29 641 aa4.84□□□□□ -1.63
R3HDM1-219ENST00000488035 DHX38Q92620 1227 aaKnown RBP4.84□□□□□ -1.63
R3HDM1-219ENST00000488035 FBRSQ9HAH7 460 aa4.84□□□□□ -1.63
R3HDM1-219ENST00000488035 MRS2Q9HD23 443 aa4.84□□□□□ -1.63
R3HDM1-219ENST00000488035 IGSF5Q9NSI5 407 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms