RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 CCDC85CA6NKD9 419 aa9.63□□□□□ -0.87
NECTIN3-209ENST00000488016 LILRA1O75019 489 aa9.63□□□□□ -0.87
NECTIN3-209ENST00000488016 SURF6O75683 361 aaKnown RBP9.63□□□□□ -0.87
NECTIN3-209ENST00000488016 CIAO1O76071 339 aa9.63□□□□□ -0.87
NECTIN3-209ENST00000488016 IL1R1P14778 569 aa9.63□□□□□ -0.87
NECTIN3-209ENST00000488016 HIBADHP31937 336 aaKnown RBP9.63□□□□□ -0.87
NECTIN3-209ENST00000488016 PHKA1P46020 1223 aa9.63□□□□□ -0.87
NECTIN3-209ENST00000488016 CTCFP49711 727 aaPredicted RBP9.63□□□□□ -0.87
NECTIN3-209ENST00000488016 IRX6P78412 446 aaPredicted RBP9.63□□□□□ -0.87
NECTIN3-209ENST00000488016 PTSQ03393 145 aa9.63□□□□□ -0.87
NECTIN3-209ENST00000488016 FBXO33Q7Z6M2 555 aa9.63□□□□□ -0.87
NECTIN3-209ENST00000488016 LDHDQ86WU2 507 aa9.63□□□□□ -0.87
NECTIN3-209ENST00000488016 ADARB2Q9NS39 739 aaKnown RBP9.63□□□□□ -0.87
NECTIN3-209ENST00000488016 CEP126Q9P2H0 1117 aa9.63□□□□□ -0.87
NECTIN3-209ENST00000488016 DDX19BQ9UMR2 479 aa9.63□□□□□ -0.87
NECTIN3-209ENST00000488016 ZNF609O15014 1411 aa9.63□□□□□ -0.87
NECTIN3-209ENST00000488016 ARAP2Q8WZ64 1704 aa9.62□□□□□ -0.87
NECTIN3-209ENST00000488016 A0A1B0GUL7 405 aa9.62□□□□□ -0.87
NECTIN3-209ENST00000488016 ADM5C9JUS6 153 aa9.62□□□□□ -0.87
NECTIN3-209ENST00000488016 VSIG8P0DPA2 414 aa9.62□□□□□ -0.87
NECTIN3-209ENST00000488016 SLC5A1P13866 664 aa9.62□□□□□ -0.87
NECTIN3-209ENST00000488016 ADD1P35611 737 aaKnown RBP9.62□□□□□ -0.87
NECTIN3-209ENST00000488016 PTGIRP43119 386 aa9.62□□□□□ -0.87
NECTIN3-209ENST00000488016 CTSOP43234 321 aaPredicted RBP9.62□□□□□ -0.87
NECTIN3-209ENST00000488016 G3BP1Q13283 466 aaKnown RBP eCLIP9.62□□□□□ -0.87
NECTIN3-209ENST00000488016 OS9Q13438 667 aaPredicted RBP9.62□□□□□ -0.87
NECTIN3-209ENST00000488016 PDE3AQ14432 1141 aa9.62□□□□□ -0.87
NECTIN3-209ENST00000488016 KIF4BQ2VIQ3 1234 aa9.62□□□□□ -0.87
NECTIN3-209ENST00000488016 NBPF9Q3BBW0 867 aa9.62□□□□□ -0.87
NECTIN3-209ENST00000488016 STRIP1Q5VSL9 837 aa9.62□□□□□ -0.87
NECTIN3-209ENST00000488016 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.62□□□□□ -0.87
NECTIN3-209ENST00000488016 TDRD7Q8NHU6 1098 aaKnown RBP9.62□□□□□ -0.87
NECTIN3-209ENST00000488016 LPIN2Q92539 896 aa9.62□□□□□ -0.87
NECTIN3-209ENST00000488016 GLIS2Q9BZE0 524 aaPredicted RBP9.62□□□□□ -0.87
NECTIN3-209ENST00000488016 TLR7Q9NYK1 1049 aaKnown RBP9.62□□□□□ -0.87
NECTIN3-209ENST00000488016 H7C1D1 291 aa9.61□□□□□ -0.87
NECTIN3-209ENST00000488016 IFIT1P09914 478 aaKnown RBP9.61□□□□□ -0.87
NECTIN3-209ENST00000488016 RGS19P49795 217 aa9.61□□□□□ -0.87
NECTIN3-209ENST00000488016 PI16Q6UXB8 463 aa9.61□□□□□ -0.87
NECTIN3-209ENST00000488016 USP50Q70EL3 339 aaPredicted RBP9.61□□□□□ -0.87
NECTIN3-209ENST00000488016 VPS37DQ86XT2 251 aa9.61□□□□□ -0.87
NECTIN3-209ENST00000488016 CNTROBQ8N137 903 aa9.61□□□□□ -0.87
NECTIN3-209ENST00000488016 AGBL3Q8NEM8 1001 aa9.61□□□□□ -0.87
NECTIN3-209ENST00000488016 DPF2Q92785 391 aa9.61□□□□□ -0.87
NECTIN3-209ENST00000488016 XAGE2Q96GT9 111 aa9.61□□□□□ -0.87
NECTIN3-209ENST00000488016 NEUROD6Q96NK8 337 aa9.61□□□□□ -0.87
NECTIN3-209ENST00000488016 MYOZ2Q9NPC6 264 aa9.61□□□□□ -0.87
NECTIN3-209ENST00000488016 HDAC5Q9UQL6 1122 aa9.61□□□□□ -0.87
NECTIN3-209ENST00000488016 MYH13Q9UKX3 1938 aa9.6□□□□□ -0.87
NECTIN3-209ENST00000488016 PASKQ96RG2 1323 aa9.6□□□□□ -0.87
NECTIN3-209ENST00000488016 FAM181BA6NEQ2 426 aa9.6□□□□□ -0.87
NECTIN3-209ENST00000488016 PRKCSHP14314 528 aaPredicted RBP9.6□□□□□ -0.87
NECTIN3-209ENST00000488016 RPS12P25398 132 aaKnown RBP9.6□□□□□ -0.87
NECTIN3-209ENST00000488016 ZNF280AP59817 542 aaPredicted RBP9.6□□□□□ -0.87
NECTIN3-209ENST00000488016 MFSD14BQ5SR56 506 aa9.6□□□□□ -0.87
NECTIN3-209ENST00000488016 CCDC102BQ68D86 513 aa9.6□□□□□ -0.87
NECTIN3-209ENST00000488016 USP48Q86UV5 1035 aa9.6□□□□□ -0.87
NECTIN3-209ENST00000488016 PNMA8AQ86V59 439 aaPredicted RBP9.6□□□□□ -0.87
NECTIN3-209ENST00000488016 AIDAQ96BJ3 306 aa9.6□□□□□ -0.87
NECTIN3-209ENST00000488016 DBNDD2Q9BQY9 259 aa9.6□□□□□ -0.87
NECTIN3-209ENST00000488016 CCDC8Q9H0W5 538 aaPredicted RBP9.6□□□□□ -0.87
NECTIN3-209ENST00000488016 IL1RAPL2Q9NP60 686 aa9.6□□□□□ -0.87
NECTIN3-209ENST00000488016 GGA3Q9NZ52 723 aa9.6□□□□□ -0.87
NECTIN3-209ENST00000488016 CNTNAP1P78357 1384 aa9.6□□□□□ -0.87
NECTIN3-209ENST00000488016 FAM205AQ6ZU69 1335 aa9.59□□□□□ -0.87
NECTIN3-209ENST00000488016 POLR2AP24928 1970 aaKnown RBP9.59□□□□□ -0.87
NECTIN3-209ENST00000488016 TNRC18O15417 2968 aaPredicted RBP9.59□□□□□ -0.87
NECTIN3-209ENST00000488016 SMARCA5O60264 1052 aaPredicted RBP9.59□□□□□ -0.87
NECTIN3-209ENST00000488016 GPR37L1O60883 481 aa9.59□□□□□ -0.87
NECTIN3-209ENST00000488016 FRAT2O75474 233 aaPredicted RBP9.59□□□□□ -0.87
NECTIN3-209ENST00000488016 HSPA8P11142 646 aaKnown RBP9.59□□□□□ -0.87
NECTIN3-209ENST00000488016 TNNI3KQ59H18 835 aa9.59□□□□□ -0.87
NECTIN3-209ENST00000488016 CAVIN4Q5BKX8 364 aa9.59□□□□□ -0.87
NECTIN3-209ENST00000488016 ANGEL2Q5VTE6 544 aaKnown RBP9.59□□□□□ -0.87
NECTIN3-209ENST00000488016 PRAMEF18Q5VWM3 479 aa9.59□□□□□ -0.87
NECTIN3-209ENST00000488016 EAF2Q96CJ1 260 aaPredicted RBP9.59□□□□□ -0.87
NECTIN3-209ENST00000488016 ZNF408Q9H9D4 720 aa9.59□□□□□ -0.87
NECTIN3-209ENST00000488016 TTF2Q9UNY4 1162 aaKnown RBP9.59□□□□□ -0.87
NECTIN3-209ENST00000488016 FPGT-TNNI3KV9GXZ4 949 aa9.59□□□□□ -0.87
NECTIN3-209ENST00000488016 CLRN2A0PK11 232 aa9.58□□□□□ -0.88
NECTIN3-209ENST00000488016 WNT10BO00744 389 aa9.58□□□□□ -0.88
NECTIN3-209ENST00000488016 RASGRF1Q13972 1273 aa9.58□□□□□ -0.88
NECTIN3-209ENST00000488016 CFAP100Q494V2 611 aa9.58□□□□□ -0.88
NECTIN3-209ENST00000488016 ZSCAN1Q8NBB4 408 aa9.58□□□□□ -0.88
NECTIN3-209ENST00000488016 EXOC6Q8TAG9 804 aa9.58□□□□□ -0.88
NECTIN3-209ENST00000488016 RNF217Q8TC41 542 aa9.58□□□□□ -0.88
NECTIN3-209ENST00000488016 DBNLQ9UJU6 430 aaKnown RBP9.58□□□□□ -0.88
NECTIN3-209ENST00000488016 NOP58Q9Y2X3 529 aaKnown RBP9.58□□□□□ -0.88
NECTIN3-209ENST00000488016 PCDHB11Q9Y5F2 797 aa9.58□□□□□ -0.88
NECTIN3-209ENST00000488016 MYO3BQ8WXR4 1341 aa9.57□□□□□ -0.88
NECTIN3-209ENST00000488016 PRDX5P30044 214 aa9.57□□□□□ -0.88
NECTIN3-209ENST00000488016 MCAMP43121 646 aa9.57□□□□□ -0.88
NECTIN3-209ENST00000488016 RBM5P52756 815 aaKnown RBP eCLIP9.57□□□□□ -0.88
NECTIN3-209ENST00000488016 TBC1D9Q6ZT07 1266 aa9.57□□□□□ -0.88
NECTIN3-209ENST00000488016 CCDC155Q8N6L0 562 aa9.57□□□□□ -0.88
NECTIN3-209ENST00000488016 RHPN1Q8TCX5 695 aa9.57□□□□□ -0.88
NECTIN3-209ENST00000488016 ZBED3Q96IU2 234 aaPredicted RBP9.57□□□□□ -0.88
NECTIN3-209ENST00000488016 PRMT6Q96LA8 375 aaPredicted RBP9.57□□□□□ -0.88
NECTIN3-209ENST00000488016 FZD1Q9UP38 647 aa9.57□□□□□ -0.88
NECTIN3-209ENST00000488016 CELF2O95319 508 aaKnown RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms