RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 ACER1Q8TDN7 264 aa20.39■□□□□ 0.85
HMG20B-212ENST00000487894 HELLSQ9NRZ9 838 aa20.39■□□□□ 0.85
HMG20B-212ENST00000487894 TMOD4Q9NZQ9 345 aa20.39■□□□□ 0.85
HMG20B-212ENST00000487894 PNMA3Q9UL41 463 aa20.39■□□□□ 0.85
HMG20B-212ENST00000487894 TRIM17Q9Y577 477 aa20.39■□□□□ 0.85
HMG20B-212ENST00000487894 RLFQ13129 1914 aa20.39■□□□□ 0.85
HMG20B-212ENST00000487894 MINDY4BA8MYZ0 360 aa20.38■□□□□ 0.85
HMG20B-212ENST00000487894 APPP05067 770 aa20.38■□□□□ 0.85
HMG20B-212ENST00000487894 LACTBP83111 547 aaPredicted RBP20.38■□□□□ 0.85
HMG20B-212ENST00000487894 NMIQ13287 307 aaPredicted RBP20.38■□□□□ 0.85
HMG20B-212ENST00000487894 FBXO46Q6PJ61 603 aaPredicted RBP20.38■□□□□ 0.85
HMG20B-212ENST00000487894 TMEM179Q6ZVK1 233 aa20.38■□□□□ 0.85
HMG20B-212ENST00000487894 C12orf42Q96LP6 360 aa20.38■□□□□ 0.85
HMG20B-212ENST00000487894 ARHGAP39Q9C0H5 1083 aa20.38■□□□□ 0.85
HMG20B-212ENST00000487894 EMILIN3Q9NT22 766 aa20.38■□□□□ 0.85
HMG20B-212ENST00000487894 A0A0G2JMZ2 1700 aa20.38■□□□□ 0.85
HMG20B-212ENST00000487894 DOCK3Q8IZD9 2030 aa20.37■□□□□ 0.85
HMG20B-212ENST00000487894 CENPFP49454 3210 aa20.37■□□□□ 0.85
HMG20B-212ENST00000487894 PABPC4Q13310 644 aaKnown RBP eCLIP20.37■□□□□ 0.859e-12■■□□□ 12.1
HMG20B-212ENST00000487894 ZYXQ15942 572 aaKnown RBP20.37■□□□□ 0.85
HMG20B-212ENST00000487894 USP17L2Q6R6M4 530 aa20.37■□□□□ 0.85
HMG20B-212ENST00000487894 CCDC17Q96LX7 622 aa20.37■□□□□ 0.85
HMG20B-212ENST00000487894 FEZ1Q99689 392 aa20.37■□□□□ 0.85
HMG20B-212ENST00000487894 NACAP1Q9BZK3 213 aa20.37■□□□□ 0.85
HMG20B-212ENST00000487894 KIAA1683Q9H0B3 1180 aa20.37■□□□□ 0.85
HMG20B-212ENST00000487894 EFCC1Q9HA90 598 aa20.37■□□□□ 0.85
HMG20B-212ENST00000487894 CTGFP29279 349 aa20.36■□□□□ 0.85
HMG20B-212ENST00000487894 MCMDC2Q4G0Z9 681 aa20.36■□□□□ 0.85
HMG20B-212ENST00000487894 VPS53Q5VIR6 699 aa20.36■□□□□ 0.85
HMG20B-212ENST00000487894 CLEC10AQ8IUN9 316 aa20.36■□□□□ 0.85
HMG20B-212ENST00000487894 SMCR8Q8TEV9 937 aaPredicted RBP20.36■□□□□ 0.85
HMG20B-212ENST00000487894 NAPBQ9H115 298 aa20.36■□□□□ 0.85
HMG20B-212ENST00000487894 ASCC2Q9H1I8 757 aaPredicted RBP20.36■□□□□ 0.85
HMG20B-212ENST00000487894 A0A1W2PRG0 241 aa20.35■□□□□ 0.85
HMG20B-212ENST00000487894 GSPT1P15170 499 aaKnown RBP20.35■□□□□ 0.85
HMG20B-212ENST00000487894 SDSP20132 328 aa20.35■□□□□ 0.85
HMG20B-212ENST00000487894 RASA1P20936 1047 aa20.35■□□□□ 0.85
HMG20B-212ENST00000487894 HOXA7P31268 230 aaPredicted RBP20.35■□□□□ 0.85
HMG20B-212ENST00000487894 USP14P54578 494 aa20.35■□□□□ 0.85
HMG20B-212ENST00000487894 TTC22Q5TAA0 569 aa20.35■□□□□ 0.85
HMG20B-212ENST00000487894 ZNF589Q86UQ0 364 aaPredicted RBP20.35■□□□□ 0.85
HMG20B-212ENST00000487894 STK11IPQ8N1F8 1099 aa20.35■□□□□ 0.85
HMG20B-212ENST00000487894 HPS5Q9UPZ3 1129 aa20.35■□□□□ 0.85
HMG20B-212ENST00000487894 RBBP6Q7Z6E9 1792 aaKnown RBP20.35■□□□□ 0.85
HMG20B-212ENST00000487894 PLXNB2O15031 1838 aa20.34■□□□□ 0.85
HMG20B-212ENST00000487894 OSBPP22059 807 aa20.34■□□□□ 0.85
HMG20B-212ENST00000487894 ICA1Q05084 483 aa20.34■□□□□ 0.85
HMG20B-212ENST00000487894 KIF22Q14807 665 aa20.34■□□□□ 0.85
HMG20B-212ENST00000487894 PTPN22Q9Y2R2 807 aa20.34■□□□□ 0.85
HMG20B-212ENST00000487894 COL11A1P12107 1806 aaPredicted RBP20.34■□□□□ 0.85
HMG20B-212ENST00000487894 CCDC171Q6TFL3 1326 aa20.33■□□□□ 0.85
HMG20B-212ENST00000487894 VCAM1P19320 739 aa20.33■□□□□ 0.85
HMG20B-212ENST00000487894 IRX3P78415 501 aaPredicted RBP20.33■□□□□ 0.85
HMG20B-212ENST00000487894 PPARAQ07869 468 aa20.33■□□□□ 0.85
HMG20B-212ENST00000487894 SIAH1Q8IUQ4 282 aa20.33■□□□□ 0.85
HMG20B-212ENST00000487894 ANKRD13CQ8N6S4 541 aa20.33■□□□□ 0.85
HMG20B-212ENST00000487894 ECM2O94769 699 aaPredicted RBP20.32■□□□□ 0.84
HMG20B-212ENST00000487894 PSMC4P43686 418 aa20.32■□□□□ 0.84
HMG20B-212ENST00000487894 ARHGEF6Q15052 776 aa20.32■□□□□ 0.84
HMG20B-212ENST00000487894 FAM110CQ1W6H9 321 aa20.32■□□□□ 0.84
HMG20B-212ENST00000487894 TRIM47Q96LD4 638 aa20.32■□□□□ 0.84
HMG20B-212ENST00000487894 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.32■□□□□ 0.84
HMG20B-212ENST00000487894 MKNK2Q9HBH9 465 aa20.32■□□□□ 0.84
HMG20B-212ENST00000487894 ZMYM6O95789 1325 aa20.31■□□□□ 0.84
HMG20B-212ENST00000487894 CCDC85CA6NKD9 419 aa20.31■□□□□ 0.84
HMG20B-212ENST00000487894 PRDM1O75626 825 aa20.31■□□□□ 0.84
HMG20B-212ENST00000487894 GCLCP48506 637 aaPredicted RBP20.31■□□□□ 0.84
HMG20B-212ENST00000487894 HERVK_113P62684 666 aa20.31■□□□□ 0.84
HMG20B-212ENST00000487894 ALX1Q15699 326 aa20.31■□□□□ 0.84
HMG20B-212ENST00000487894 P2RX7Q99572 595 aaKnown RBP20.31■□□□□ 0.84
HMG20B-212ENST00000487894 ARHGEF10LQ9HCE6 1279 aa20.31■□□□□ 0.84
HMG20B-212ENST00000487894 DIAPH3Q9NSV4 1193 aa20.31■□□□□ 0.84
HMG20B-212ENST00000487894 PLIN4Q96Q06 1357 aa20.31■□□□□ 0.84
HMG20B-212ENST00000487894 HIP1O00291 1037 aa20.3■□□□□ 0.84
HMG20B-212ENST00000487894 GNRH1P01148 92 aa20.3■□□□□ 0.84
HMG20B-212ENST00000487894 HSPD1P10809 573 aaKnown RBP20.3■□□□□ 0.84
HMG20B-212ENST00000487894 KIAA1755Q5JYT7 1200 aa20.3■□□□□ 0.84
HMG20B-212ENST00000487894 KANSL2Q9H9L4 492 aa20.3■□□□□ 0.84
HMG20B-212ENST00000487894 TMX2Q9Y320 296 aa20.3■□□□□ 0.84
HMG20B-212ENST00000487894 PTCH2Q9Y6C5 1203 aa20.3■□□□□ 0.84
HMG20B-212ENST00000487894 USP17L15C9J2P7 530 aa20.29■□□□□ 0.84
HMG20B-212ENST00000487894 USP17L13C9JLJ4 530 aa20.29■□□□□ 0.84
HMG20B-212ENST00000487894 USP17L11C9JVI0 530 aa20.29■□□□□ 0.84
HMG20B-212ENST00000487894 USP17L18D6R9N7 530 aa20.29■□□□□ 0.84
HMG20B-212ENST00000487894 USP17L22D6RA61 530 aa20.29■□□□□ 0.84
HMG20B-212ENST00000487894 USP17L17D6RBQ6 530 aa20.29■□□□□ 0.84
HMG20B-212ENST00000487894 USP17L19D6RCP7 530 aa20.29■□□□□ 0.84
HMG20B-212ENST00000487894 USP17L20D6RJB6 530 aa20.29■□□□□ 0.84
HMG20B-212ENST00000487894 EEF2P13639 858 aaKnown RBP20.29■□□□□ 0.84
HMG20B-212ENST00000487894 USP17L24Q0WX57 530 aa20.29■□□□□ 0.84
HMG20B-212ENST00000487894 CWC27Q6UX04 472 aaKnown RBP20.29■□□□□ 0.84
HMG20B-212ENST00000487894 CENPQQ7L2Z9 268 aaPredicted RBP20.29■□□□□ 0.84
HMG20B-212ENST00000487894 RPAP3Q9H6T3 665 aaPredicted RBP20.29■□□□□ 0.84
HMG20B-212ENST00000487894 SH2D4AQ9H788 454 aa20.29■□□□□ 0.84
HMG20B-212ENST00000487894 ZNF287Q9HBT7 754 aa20.29■□□□□ 0.84
HMG20B-212ENST00000487894 MORF4L1Q9UBU8 362 aa20.29■□□□□ 0.84
HMG20B-212ENST00000487894 ANAPC4Q9UJX5 808 aa20.29■□□□□ 0.84
HMG20B-212ENST00000487894 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.29■□□□□ 0.84
HMG20B-212ENST00000487894 IGKV6D-41A0A0C4DH26 115 aa20.28■□□□□ 0.84
HMG20B-212ENST00000487894 FMNL1O95466 1100 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms