RNA–Protein interactions for RNA: ENST00000487481.1

NME1-208, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 2

Gene NME1, Length 987 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-208ENST00000487481 USP17L17D6RBQ6 530 aa18.74■□□□□ 0.59
NME1-208ENST00000487481 USP17L19D6RCP7 530 aa18.74■□□□□ 0.59
NME1-208ENST00000487481 USP17L20D6RJB6 530 aa18.74■□□□□ 0.59
NME1-208ENST00000487481 BAG3O95817 575 aa18.74■□□□□ 0.59
NME1-208ENST00000487481 CYBAP13498 195 aa18.74■□□□□ 0.59
NME1-208ENST00000487481 ARID4AP29374 1257 aaPredicted RBP18.74■□□□□ 0.59
NME1-208ENST00000487481 CYP2C19P33261 490 aa18.74■□□□□ 0.59
NME1-208ENST00000487481 USP17L24Q0WX57 530 aa18.74■□□□□ 0.59
NME1-208ENST00000487481 TFCP2Q12800 502 aa18.74■□□□□ 0.59
NME1-208ENST00000487481 TJAP1Q5JTD0 557 aa18.74■□□□□ 0.59
NME1-208ENST00000487481 GJC2Q5T442 439 aaPredicted RBP18.74■□□□□ 0.59
NME1-208ENST00000487481 PDLIM7Q9NR12 457 aa18.74■□□□□ 0.59
NME1-208ENST00000487481 LRP2BPQ9P2M1 347 aa18.74■□□□□ 0.59
NME1-208ENST00000487481 NDUFB9Q9Y6M9 179 aa18.74■□□□□ 0.59
NME1-208ENST00000487481 TNFRSF10AO00220 468 aa18.73■□□□□ 0.59
NME1-208ENST00000487481 IGHA2P01877 340 aa18.73■□□□□ 0.59
NME1-208ENST00000487481 ALDH1L2Q3SY69 923 aa18.73■□□□□ 0.59
NME1-208ENST00000487481 TRIM60Q495X7 471 aa18.73■□□□□ 0.59
NME1-208ENST00000487481 GORABQ5T7V8 394 aa18.73■□□□□ 0.59
NME1-208ENST00000487481 LBX2Q6XYB7 198 aa18.73■□□□□ 0.59
NME1-208ENST00000487481 MAPKAPK5Q8IW41 473 aa18.73■□□□□ 0.59
NME1-208ENST00000487481 TRPV1Q8NER1 839 aa18.73■□□□□ 0.59
NME1-208ENST00000487481 NPLOC4Q8TAT6 608 aa18.73■□□□□ 0.59
NME1-208ENST00000487481 TGFBRAP1Q8WUH2 860 aa18.73■□□□□ 0.59
NME1-208ENST00000487481 NEUROD6Q96NK8 337 aa18.73■□□□□ 0.59
NME1-208ENST00000487481 FEZ1Q99689 392 aa18.73■□□□□ 0.59
NME1-208ENST00000487481 AATFQ9NY61 560 aaKnown RBP eCLIP18.73■□□□□ 0.59
NME1-208ENST00000487481 ATF7IPQ6VMQ6 1270 aa18.72■□□□□ 0.59
NME1-208ENST00000487481 PALD1Q9ULE6 856 aa18.72■□□□□ 0.59
NME1-208ENST00000487481 HLA-DOAP06340 250 aa18.71■□□□□ 0.59
NME1-208ENST00000487481 MCAMP43121 646 aa18.71■□□□□ 0.59
NME1-208ENST00000487481 USP14P54578 494 aa18.71■□□□□ 0.59
NME1-208ENST00000487481 PPP4CP60510 307 aa18.71■□□□□ 0.59
NME1-208ENST00000487481 C1orf53Q5VUE5 145 aa18.71■□□□□ 0.59
NME1-208ENST00000487481 OLFML2BQ68BL8 750 aa18.71■□□□□ 0.59
NME1-208ENST00000487481 NAA16Q6N069 864 aaPredicted RBP18.71■□□□□ 0.59
NME1-208ENST00000487481 SMC4Q9NTJ3 1288 aa18.71■□□□□ 0.59
NME1-208ENST00000487481 GH2P01242 217 aa18.7■□□□□ 0.58
NME1-208ENST00000487481 ZYXQ15942 572 aaKnown RBP18.7■□□□□ 0.58
NME1-208ENST00000487481 CATSPERGQ6ZRH7 1159 aa18.7■□□□□ 0.58
NME1-208ENST00000487481 RNPC3Q96LT9 517 aaKnown RBP18.7■□□□□ 0.58
NME1-208ENST00000487481 BTBD7Q9P203 1132 aa18.7■□□□□ 0.58
NME1-208ENST00000487481 NCOR1O75376 2440 aa18.7■□□□□ 0.58
NME1-208ENST00000487481 MYH1P12882 1939 aa18.69■□□□□ 0.58
NME1-208ENST00000487481 TRIM43BA6NCK2 446 aa18.69■□□□□ 0.58
NME1-208ENST00000487481 E9PSI1 815 aa18.69■□□□□ 0.58
NME1-208ENST00000487481 SEPT4O43236 478 aa18.69■□□□□ 0.58
NME1-208ENST00000487481 SRGAP3O43295 1099 aa18.69■□□□□ 0.58
NME1-208ENST00000487481 UQCRFS1P1P0C7P4 283 aa18.69■□□□□ 0.58
NME1-208ENST00000487481 VCAM1P19320 739 aa18.69■□□□□ 0.58
NME1-208ENST00000487481 SH3RF1Q7Z6J0 888 aa18.69■□□□□ 0.58
NME1-208ENST00000487481 TRIM43Q96BQ3 446 aaPredicted RBP18.69■□□□□ 0.58
NME1-208ENST00000487481 MEIS3Q99687 375 aa18.69■□□□□ 0.58
NME1-208ENST00000487481 KIAA1683Q9H0B3 1180 aa18.69■□□□□ 0.58
NME1-208ENST00000487481 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.69■□□□□ 0.58
NME1-208ENST00000487481 DPP9Q86TI2 863 aa18.68■□□□□ 0.58
NME1-208ENST00000487481 USP38Q8NB14 1042 aa18.68■□□□□ 0.58
NME1-208ENST00000487481 SPDYE16A6NNV3 312 aaPredicted RBP18.67■□□□□ 0.58
NME1-208ENST00000487481 ADORA2AP29274 412 aa18.67■□□□□ 0.58
NME1-208ENST00000487481 ADCYAP1R1P41586 468 aa18.67■□□□□ 0.58
NME1-208ENST00000487481 MTX1Q13505 466 aa18.67■□□□□ 0.58
NME1-208ENST00000487481 ANO1Q5XXA6 986 aa18.67■□□□□ 0.58
NME1-208ENST00000487481 SAP30BPQ9UHR5 308 aaKnown RBP18.67■□□□□ 0.58
NME1-208ENST00000487481 TACC3Q9Y6A5 838 aa18.67■□□□□ 0.58
NME1-208ENST00000487481 STRNO43815 780 aa18.66■□□□□ 0.58
NME1-208ENST00000487481 IGSF3O75054 1194 aa18.66■□□□□ 0.58
NME1-208ENST00000487481 MYCNP04198 464 aaPredicted RBP18.66■□□□□ 0.58
NME1-208ENST00000487481 DNAJB2P25686 324 aa18.66■□□□□ 0.58
NME1-208ENST00000487481 GRIN2CQ14957 1233 aa18.66■□□□□ 0.58
NME1-208ENST00000487481 LRRC41Q15345 812 aa18.66■□□□□ 0.58
NME1-208ENST00000487481 TATDN1Q6P1N9 297 aa18.66■□□□□ 0.58
NME1-208ENST00000487481 ADGRA1Q86SQ6 560 aa18.66■□□□□ 0.58
NME1-208ENST00000487481 FAM9BQ8IZU0 186 aa18.66■□□□□ 0.58
NME1-208ENST00000487481 API5Q9BZZ5 524 aaKnown RBP18.66■□□□□ 0.58
NME1-208ENST00000487481 MYO5AQ9Y4I1 1855 aaKnown RBP18.66■□□□□ 0.58
NME1-208ENST00000487481 A0A0G2JMZ2 1700 aa18.66■□□□□ 0.58
NME1-208ENST00000487481 ANP32CO43423 234 aa18.65■□□□□ 0.58
NME1-208ENST00000487481 CLTBP09497 229 aa18.65■□□□□ 0.58
NME1-208ENST00000487481 TLE2Q04725 743 aa18.65■□□□□ 0.58
NME1-208ENST00000487481 RAB3GAP1Q15042 981 aa18.65■□□□□ 0.58
NME1-208ENST00000487481 FERMT2Q96AC1 680 aa18.65■□□□□ 0.58
NME1-208ENST00000487481 RPAP3Q9H6T3 665 aaPredicted RBP18.65■□□□□ 0.58
NME1-208ENST00000487481 MYO9BQ13459 2157 aa18.64■□□□□ 0.57
NME1-208ENST00000487481 ITGB8P26012 769 aa18.64■□□□□ 0.57
NME1-208ENST00000487481 EPHB4P54760 987 aa18.64■□□□□ 0.57
NME1-208ENST00000487481 FAM47AQ5JRC9 791 aa18.64■□□□□ 0.57
NME1-208ENST00000487481 SHCBP1Q8NEM2 672 aa18.64■□□□□ 0.57
NME1-208ENST00000487481 MOV10L1Q9BXT6 1211 aaKnown RBP18.64■□□□□ 0.57
NME1-208ENST00000487481 EHD4Q9H223 541 aa18.64■□□□□ 0.57
NME1-208ENST00000487481 SLC5A4Q9NY91 659 aa18.64■□□□□ 0.57
NME1-208ENST00000487481 PHF24Q9UPV7 400 aa18.64■□□□□ 0.57
NME1-208ENST00000487481 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.63■□□□□ 0.57
NME1-208ENST00000487481 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.63■□□□□ 0.57
NME1-208ENST00000487481 KIAA0355O15063 1070 aa18.63■□□□□ 0.57
NME1-208ENST00000487481 GNAI3P08754 354 aa18.63■□□□□ 0.57
NME1-208ENST00000487481 PLA2G5P39877 138 aa18.63■□□□□ 0.57
NME1-208ENST00000487481 FPGSQ05932 587 aa18.63■□□□□ 0.57
NME1-208ENST00000487481 ACER1Q8TDN7 264 aa18.63■□□□□ 0.57
NME1-208ENST00000487481 ATXN2LQ8WWM7 1075 aaKnown RBP18.63■□□□□ 0.57
NME1-208ENST00000487481 ZNF576Q9H609 170 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms