RNA–Protein interactions for RNA: ENST00000487462.1

CDK11A-217, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 437 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-217ENST00000487462 TXNRD2Q9NNW7 524 aa12□□□□□ -0.49
CDK11A-217ENST00000487462 DDX20Q9UHI6 824 aaKnown RBP12□□□□□ -0.49
CDK11A-217ENST00000487462 RFX7Q2KHR2 1363 aa12□□□□□ -0.49
CDK11A-217ENST00000487462 C5orf42Q9H799 3197 aa12□□□□□ -0.49
CDK11A-217ENST00000487462 RGS2P41220 211 aa11.99□□□□□ -0.49
CDK11A-217ENST00000487462 G2E3Q7L622 706 aa11.99□□□□□ -0.49
CDK11A-217ENST00000487462 SH3BP5LQ7L8J4 393 aa11.99□□□□□ -0.49
CDK11A-217ENST00000487462 VPS37DQ86XT2 251 aa11.99□□□□□ -0.49
CDK11A-217ENST00000487462 KCNK17Q96T54 332 aa11.99□□□□□ -0.49
CDK11A-217ENST00000487462 FLRT1Q9NZU1 646 aa11.99□□□□□ -0.49
CDK11A-217ENST00000487462 POTEB3A0JP26 581 aa11.98□□□□□ -0.49
CDK11A-217ENST00000487462 HMGCS2P54868 508 aa11.98□□□□□ -0.49
CDK11A-217ENST00000487462 DIXDC1Q155Q3 683 aa11.98□□□□□ -0.49
CDK11A-217ENST00000487462 EPHA10Q5JZY3 1008 aa11.98□□□□□ -0.49
CDK11A-217ENST00000487462 GJC2Q5T442 439 aaPredicted RBP11.98□□□□□ -0.49
CDK11A-217ENST00000487462 POTEBQ6S5H4 581 aa11.98□□□□□ -0.49
CDK11A-217ENST00000487462 LMBR1LQ6UX01 489 aa11.98□□□□□ -0.49
CDK11A-217ENST00000487462 PUS3Q9BZE2 481 aaKnown RBP11.98□□□□□ -0.49
CDK11A-217ENST00000487462 MYH16Q9H6N6 1097 aa11.98□□□□□ -0.49
CDK11A-217ENST00000487462 LRRFIP2Q9Y608 721 aaKnown RBP11.98□□□□□ -0.49
CDK11A-217ENST00000487462 UTYO14607 1347 aa11.97□□□□□ -0.49
CDK11A-217ENST00000487462 FRAT2O75474 233 aaPredicted RBP11.97□□□□□ -0.49
CDK11A-217ENST00000487462 MAPK4P31152 587 aa11.97□□□□□ -0.49
CDK11A-217ENST00000487462 SPP2Q13103 211 aa11.97□□□□□ -0.49
CDK11A-217ENST00000487462 PABPC4Q13310 644 aaKnown RBP eCLIP11.97□□□□□ -0.49
CDK11A-217ENST00000487462 CCDC57Q2TAC2 916 aa11.97□□□□□ -0.49
CDK11A-217ENST00000487462 TAF7LQ5H9L4 462 aa11.97□□□□□ -0.49
CDK11A-217ENST00000487462 GPR142Q7Z601 462 aa11.97□□□□□ -0.49
CDK11A-217ENST00000487462 TSPYL6Q8N831 410 aa11.97□□□□□ -0.49
CDK11A-217ENST00000487462 TRPV1Q8NER1 839 aa11.97□□□□□ -0.49
CDK11A-217ENST00000487462 PBX4Q9BYU1 374 aa11.97□□□□□ -0.49
CDK11A-217ENST00000487462 PORCNQ9H237 461 aa11.97□□□□□ -0.49
CDK11A-217ENST00000487462 MYH2Q9UKX2 1941 aa11.97□□□□□ -0.49
CDK11A-217ENST00000487462 TRIOO75962 3097 aa11.96□□□□□ -0.49
CDK11A-217ENST00000487462 DDTLA6NHG4 134 aaPredicted RBP11.96□□□□□ -0.49
CDK11A-217ENST00000487462 MSCO60682 206 aa11.96□□□□□ -0.49
CDK11A-217ENST00000487462 IGFBP4P22692 258 aa11.96□□□□□ -0.49
CDK11A-217ENST00000487462 RGS3P49796 1198 aa11.96□□□□□ -0.49
CDK11A-217ENST00000487462 TRIM26Q12899 539 aaPredicted RBP11.96□□□□□ -0.49
CDK11A-217ENST00000487462 C6orf132Q5T0Z8 1188 aa11.96□□□□□ -0.49
CDK11A-217ENST00000487462 C1orf53Q5VUE5 145 aa11.96□□□□□ -0.49
CDK11A-217ENST00000487462 GPRC5AQ8NFJ5 357 aa11.96□□□□□ -0.49
CDK11A-217ENST00000487462 LINS1Q8NG48 757 aa11.96□□□□□ -0.49
CDK11A-217ENST00000487462 USP40Q9NVE5 1235 aa11.96□□□□□ -0.49
CDK11A-217ENST00000487462 IFT57Q9NWB7 429 aa11.96□□□□□ -0.49
CDK11A-217ENST00000487462 GRXCR1A8MXD5 290 aa11.95□□□□□ -0.5
CDK11A-217ENST00000487462 PPP1R3GB7ZBB8 358 aa11.95□□□□□ -0.5
CDK11A-217ENST00000487462 NHLH1Q02575 133 aa11.95□□□□□ -0.5
CDK11A-217ENST00000487462 TLE2Q04725 743 aa11.95□□□□□ -0.5
CDK11A-217ENST00000487462 FPGSQ05932 587 aa11.95□□□□□ -0.5
CDK11A-217ENST00000487462 Q3C1V9 767 aa11.95□□□□□ -0.5
CDK11A-217ENST00000487462 ZNF280CQ8ND82 737 aa11.95□□□□□ -0.5
CDK11A-217ENST00000487462 RBPJLQ9UBG7 517 aa11.95□□□□□ -0.5
CDK11A-217ENST00000487462 PRRC2BQ5JSZ5 2229 aaKnown RBP11.94□□□□□ -0.5
CDK11A-217ENST00000487462 KBTBD13C9JR72 458 aa11.94□□□□□ -0.5
CDK11A-217ENST00000487462 SMIM22K7EJ46 135 aa11.94□□□□□ -0.5
CDK11A-217ENST00000487462 KIAA0355O15063 1070 aa11.94□□□□□ -0.5
CDK11A-217ENST00000487462 ENTPD3O75355 529 aa11.94□□□□□ -0.5
CDK11A-217ENST00000487462 IGHA2P01877 340 aa11.94□□□□□ -0.5
CDK11A-217ENST00000487462 CNGA1P29973 690 aa11.94□□□□□ -0.5
CDK11A-217ENST00000487462 HERVK_113P62684 666 aa11.94□□□□□ -0.5
CDK11A-217ENST00000487462 ERVK-9P63128 1117 aa11.94□□□□□ -0.5
CDK11A-217ENST00000487462 ERVK-24P63145 666 aa11.94□□□□□ -0.5
CDK11A-217ENST00000487462 MAP2K5Q13163 448 aa11.94□□□□□ -0.5
CDK11A-217ENST00000487462 CAVIN4Q5BKX8 364 aa11.94□□□□□ -0.5
CDK11A-217ENST00000487462 SH3D19Q5HYK7 790 aa11.94□□□□□ -0.5
CDK11A-217ENST00000487462 MFSD14CQ5VZR4 134 aa11.94□□□□□ -0.5
CDK11A-217ENST00000487462 PLEKHH3Q7Z736 793 aa11.94□□□□□ -0.5
CDK11A-217ENST00000487462 RUNDC1Q96C34 613 aa11.94□□□□□ -0.5
CDK11A-217ENST00000487462 IDI2Q9BXS1 227 aa11.94□□□□□ -0.5
CDK11A-217ENST00000487462 FAM196BA6NMK8 535 aa11.93□□□□□ -0.5
CDK11A-217ENST00000487462 CLTBP09497 229 aa11.93□□□□□ -0.5
CDK11A-217ENST00000487462 CYBAP13498 195 aa11.93□□□□□ -0.5
CDK11A-217ENST00000487462 PRDX5P30044 214 aa11.93□□□□□ -0.5
CDK11A-217ENST00000487462 IRX3P78415 501 aaPredicted RBP11.93□□□□□ -0.5
CDK11A-217ENST00000487462 AAK1Q2M2I8 961 aa11.93□□□□□ -0.5
CDK11A-217ENST00000487462 RASIP1Q5U651 963 aa11.93□□□□□ -0.5
CDK11A-217ENST00000487462 VGLL2Q8N8G2 317 aa11.93□□□□□ -0.5
CDK11A-217ENST00000487462 ARRDC4Q8NCT1 418 aa11.93□□□□□ -0.5
CDK11A-217ENST00000487462 DNAAF4Q8WXU2 420 aa11.93□□□□□ -0.5
CDK11A-217ENST00000487462 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.93□□□□□ -0.5
CDK11A-217ENST00000487462 DDX4Q9NQI0 724 aaKnown RBP11.93□□□□□ -0.5
CDK11A-217ENST00000487462 TACC3Q9Y6A5 838 aa11.93□□□□□ -0.5
CDK11A-217ENST00000487462 ZDBF2Q9HCK1 2354 aa11.93□□□□□ -0.5
CDK11A-217ENST00000487462 CACNA1FO60840 1977 aa11.92□□□□□ -0.5
CDK11A-217ENST00000487462 MROH5Q6ZUA9 1318 aa11.92□□□□□ -0.5
CDK11A-217ENST00000487462 PI4K2BG5E9Z4 385 aa11.92□□□□□ -0.5
CDK11A-217ENST00000487462 ERC2O15083 957 aa11.92□□□□□ -0.5
CDK11A-217ENST00000487462 RAG1P15918 1043 aa11.92□□□□□ -0.5
CDK11A-217ENST00000487462 HOXA7P31268 230 aaPredicted RBP11.92□□□□□ -0.5
CDK11A-217ENST00000487462 CYP2C19P33261 490 aa11.92□□□□□ -0.5
CDK11A-217ENST00000487462 ADCYAP1R1P41586 468 aa11.92□□□□□ -0.5
CDK11A-217ENST00000487462 GNAI1P63096 354 aa11.92□□□□□ -0.5
CDK11A-217ENST00000487462 ZSCAN29Q8IWY8 852 aaPredicted RBP11.92□□□□□ -0.5
CDK11A-217ENST00000487462 FERMT2Q96AC1 680 aa11.92□□□□□ -0.5
CDK11A-217ENST00000487462 EDC3Q96F86 508 aaKnown RBP11.92□□□□□ -0.5
CDK11A-217ENST00000487462 STK31Q9BXU1 1019 aa11.92□□□□□ -0.5
CDK11A-217ENST00000487462 CHMP4AQ9BY43 222 aa11.92□□□□□ -0.5
CDK11A-217ENST00000487462 PCGF6Q9BYE7 350 aa11.92□□□□□ -0.5
CDK11A-217ENST00000487462 ZNF318Q5VUA4 2279 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms