RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 MSL1Q68DK7 614 aa8.45□□□□□ -1.06
RTFDC1-209ENST00000487211 HDGFL2Q7Z4V5 671 aaPredicted RBP8.45□□□□□ -1.06
RTFDC1-209ENST00000487211 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.45□□□□□ -1.06
RTFDC1-209ENST00000487211 DNAJC5GQ8N7S2 189 aa8.45□□□□□ -1.06
RTFDC1-209ENST00000487211 DDX54Q8TDD1 881 aaKnown RBP8.45□□□□□ -1.06
RTFDC1-209ENST00000487211 TERF2IPQ9NYB0 399 aa8.45□□□□□ -1.06
RTFDC1-209ENST00000487211 TLR6Q9Y2C9 796 aa8.45□□□□□ -1.06
RTFDC1-209ENST00000487211 SAMM50Q9Y512 469 aa8.45□□□□□ -1.06
RTFDC1-209ENST00000487211 KTN1Q86UP2 1357 aaKnown RBP8.45□□□□□ -1.06
RTFDC1-209ENST00000487211 USP6P35125 1406 aa8.45□□□□□ -1.06
RTFDC1-209ENST00000487211 KIF1AQ12756 1690 aa8.44□□□□□ -1.06
RTFDC1-209ENST00000487211 LMNB1P20700 586 aa8.44□□□□□ -1.06
RTFDC1-209ENST00000487211 NME2P22392 152 aa8.44□□□□□ -1.06
RTFDC1-209ENST00000487211 ARL4DP49703 201 aa8.44□□□□□ -1.06
RTFDC1-209ENST00000487211 GSTM4Q03013 218 aa8.44□□□□□ -1.06
RTFDC1-209ENST00000487211 GNL2Q13823 731 aaKnown RBP8.44□□□□□ -1.06
RTFDC1-209ENST00000487211 HGSNATQ68CP4 663 aa8.44□□□□□ -1.06
RTFDC1-209ENST00000487211 TREML4Q6UXN2 200 aa8.44□□□□□ -1.06
RTFDC1-209ENST00000487211 SULF2Q8IWU5 870 aa8.44□□□□□ -1.06
RTFDC1-209ENST00000487211 PHC3Q8NDX5 983 aa8.44□□□□□ -1.06
RTFDC1-209ENST00000487211 NEDD1Q8NHV4 660 aa8.44□□□□□ -1.06
RTFDC1-209ENST00000487211 TINF2Q9BSI4 451 aa8.44□□□□□ -1.06
RTFDC1-209ENST00000487211 RRAGCQ9HB90 399 aa8.44□□□□□ -1.06
RTFDC1-209ENST00000487211 PRDM6Q9NQX0 595 aa8.44□□□□□ -1.06
RTFDC1-209ENST00000487211 USP35Q9P2H5 1018 aa8.44□□□□□ -1.06
RTFDC1-209ENST00000487211 KIF7Q2M1P5 1343 aa8.44□□□□□ -1.06
RTFDC1-209ENST00000487211 A0A1W2PP64 1363 aa8.44□□□□□ -1.06
RTFDC1-209ENST00000487211 TNS3Q68CZ2 1445 aa8.44□□□□□ -1.06
RTFDC1-209ENST00000487211 TOPAZ1Q8N9V7 1692 aa8.43□□□□□ -1.06
RTFDC1-209ENST00000487211 FAM83GA6ND36 823 aa8.43□□□□□ -1.06
RTFDC1-209ENST00000487211 EIF4A3P38919 411 aaKnown RBP8.43□□□□□ -1.06
RTFDC1-209ENST00000487211 FAM160A1Q05DH4 1040 aa8.43□□□□□ -1.06
RTFDC1-209ENST00000487211 ZNF385CQ66K41 422 aaPredicted RBP8.43□□□□□ -1.06
RTFDC1-209ENST00000487211 NME9Q86XW9 330 aa8.43□□□□□ -1.06
RTFDC1-209ENST00000487211 SPON2Q9BUD6 331 aa8.43□□□□□ -1.06
RTFDC1-209ENST00000487211 CARD10Q9BWT7 1032 aa8.43□□□□□ -1.06
RTFDC1-209ENST00000487211 PANK3Q9H999 370 aa8.43□□□□□ -1.06
RTFDC1-209ENST00000487211 CBX8Q9HC52 389 aa8.43□□□□□ -1.06
RTFDC1-209ENST00000487211 ADAMTS1Q9UHI8 967 aa8.43□□□□□ -1.06
RTFDC1-209ENST00000487211 WASHC2AQ641Q2 1341 aa8.43□□□□□ -1.06
RTFDC1-209ENST00000487211 ARHGEF10O15013 1369 aa8.43□□□□□ -1.06
RTFDC1-209ENST00000487211 BRD4O60885 1362 aaPredicted RBP8.43□□□□□ -1.06
RTFDC1-209ENST00000487211 FSCN2O14926 492 aa8.42□□□□□ -1.06
RTFDC1-209ENST00000487211 FYB1O15117 783 aa8.42□□□□□ -1.06
RTFDC1-209ENST00000487211 GCP02774 474 aa8.42□□□□□ -1.06
RTFDC1-209ENST00000487211 PF4P02776 101 aa8.42□□□□□ -1.06
RTFDC1-209ENST00000487211 BMP6P22004 513 aa8.42□□□□□ -1.06
RTFDC1-209ENST00000487211 ARNTP27540 789 aa8.42□□□□□ -1.06
RTFDC1-209ENST00000487211 RPS26P62854 115 aaKnown RBP8.42□□□□□ -1.06
RTFDC1-209ENST00000487211 C19orf57Q0VDD7 668 aa8.42□□□□□ -1.06
RTFDC1-209ENST00000487211 PAK2Q13177 524 aa8.42□□□□□ -1.06
RTFDC1-209ENST00000487211 AGMOQ6ZNB7 445 aa8.42□□□□□ -1.06
RTFDC1-209ENST00000487211 KIAA0825Q8IV33 1275 aa8.42□□□□□ -1.06
RTFDC1-209ENST00000487211 DMRTC2Q8IXT2 367 aaPredicted RBP8.42□□□□□ -1.06
RTFDC1-209ENST00000487211 SVOPQ8N4V2 548 aa8.42□□□□□ -1.06
RTFDC1-209ENST00000487211 STK35Q8TDR2 534 aa8.42□□□□□ -1.06
RTFDC1-209ENST00000487211 WNT8BQ93098 351 aa8.42□□□□□ -1.06
RTFDC1-209ENST00000487211 RHOVQ96L33 236 aa8.42□□□□□ -1.06
RTFDC1-209ENST00000487211 SOX17Q9H6I2 414 aaPredicted RBP8.42□□□□□ -1.06
RTFDC1-209ENST00000487211 ENAMQ9NRM1 1142 aa8.42□□□□□ -1.06
RTFDC1-209ENST00000487211 TRPM3Q9HCF6 1732 aaPredicted RBP8.41□□□□□ -1.06
RTFDC1-209ENST00000487211 ANKRD36BQ8N2N9 1353 aa8.41□□□□□ -1.06
RTFDC1-209ENST00000487211 TTC21AQ8NDW8 1320 aa8.41□□□□□ -1.06
RTFDC1-209ENST00000487211 NID1P14543 1247 aa8.41□□□□□ -1.06
RTFDC1-209ENST00000487211 TFE3P19532 575 aaPredicted RBP8.41□□□□□ -1.06
RTFDC1-209ENST00000487211 FBLN1P23142 703 aa8.41□□□□□ -1.06
RTFDC1-209ENST00000487211 LMNB2Q03252 620 aa8.41□□□□□ -1.06
RTFDC1-209ENST00000487211 CAMK2GQ13555 558 aaPredicted RBP8.41□□□□□ -1.06
RTFDC1-209ENST00000487211 LRRC14Q15048 493 aa8.41□□□□□ -1.06
RTFDC1-209ENST00000487211 SNAP47Q5SQN1 464 aa8.41□□□□□ -1.06
RTFDC1-209ENST00000487211 ZNF296Q8WUU4 475 aaPredicted RBP8.41□□□□□ -1.06
RTFDC1-209ENST00000487211 EMILIN2Q9BXX0 1053 aa8.41□□□□□ -1.06
RTFDC1-209ENST00000487211 OSGEPQ9NPF4 335 aa8.41□□□□□ -1.06
RTFDC1-209ENST00000487211 CYP8B1Q9UNU6 501 aa8.41□□□□□ -1.06
RTFDC1-209ENST00000487211 ITSN1Q15811 1721 aa8.4□□□□□ -1.06
RTFDC1-209ENST00000487211 USP19O94966 1318 aa8.4□□□□□ -1.06
RTFDC1-209ENST00000487211 DGKGP49619 791 aa8.4□□□□□ -1.06
RTFDC1-209ENST00000487211 AP3B2Q13367 1082 aa8.4□□□□□ -1.06
RTFDC1-209ENST00000487211 COL9A3Q14050 684 aaPredicted RBP8.4□□□□□ -1.06
RTFDC1-209ENST00000487211 TRAPPC3LQ5T215 181 aa8.4□□□□□ -1.06
RTFDC1-209ENST00000487211 RASIP1Q5U651 963 aa8.4□□□□□ -1.06
RTFDC1-209ENST00000487211 LLGL2Q6P1M3 1020 aa8.4□□□□□ -1.06
RTFDC1-209ENST00000487211 FBXL19Q6PCT2 694 aa8.4□□□□□ -1.06
RTFDC1-209ENST00000487211 SLC43A3Q8NBI5 491 aa8.4□□□□□ -1.06
RTFDC1-209ENST00000487211 GOLM1Q8NBJ4 401 aa8.4□□□□□ -1.06
RTFDC1-209ENST00000487211 GRIN3AQ8TCU5 1115 aa8.4□□□□□ -1.06
RTFDC1-209ENST00000487211 SREK1Q8WXA9 508 aaKnown RBP8.4□□□□□ -1.06
RTFDC1-209ENST00000487211 PCDHB5Q9Y5E4 795 aa8.4□□□□□ -1.06
RTFDC1-209ENST00000487211 EDC4Q6P2E9 1401 aaKnown RBP8.39□□□□□ -1.07
RTFDC1-209ENST00000487211 CCDC7Q96M83 1385 aa8.39□□□□□ -1.07
RTFDC1-209ENST00000487211 IGSF3O75054 1194 aa8.39□□□□□ -1.07
RTFDC1-209ENST00000487211 CHRNA2Q15822 529 aa8.39□□□□□ -1.07
RTFDC1-209ENST00000487211 GPRASP2Q96D09 838 aa8.39□□□□□ -1.07
RTFDC1-209ENST00000487211 KLHDC7BQ96G42 594 aa8.39□□□□□ -1.07
RTFDC1-209ENST00000487211 ZC3H12CQ9C0D7 883 aaKnown RBP8.39□□□□□ -1.07
RTFDC1-209ENST00000487211 MIR1-1HGQ9H1L0 117 aa8.39□□□□□ -1.07
RTFDC1-209ENST00000487211 SUPT16HQ9Y5B9 1047 aaKnown RBP8.39□□□□□ -1.07
RTFDC1-209ENST00000487211 ALS2Q96Q42 1657 aa8.39□□□□□ -1.07
RTFDC1-209ENST00000487211 GLI3P10071 1580 aa8.39□□□□□ -1.07
RTFDC1-209ENST00000487211 GOLGB1Q14789 3259 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms