RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 PXDNLA1KZ92 1463 aa8.59□□□□□ -1.03
COL6A4P1-202ENST00000487147 MBD4O95243 580 aa8.59□□□□□ -1.03
COL6A4P1-202ENST00000487147 COPB1P53618 953 aaKnown RBP8.59□□□□□ -1.03
COL6A4P1-202ENST00000487147 ASIC1P78348 528 aa8.59□□□□□ -1.03
COL6A4P1-202ENST00000487147 MSL1Q68DK7 614 aa8.59□□□□□ -1.03
COL6A4P1-202ENST00000487147 IFT20Q8IY31 132 aa8.59□□□□□ -1.03
COL6A4P1-202ENST00000487147 CMTR1Q8N1G2 835 aaKnown RBP8.59□□□□□ -1.03
COL6A4P1-202ENST00000487147 CSRNP2Q9H175 543 aa8.59□□□□□ -1.03
COL6A4P1-202ENST00000487147 MRPL44Q9H9J2 332 aaKnown RBP8.59□□□□□ -1.03
COL6A4P1-202ENST00000487147 GOPCQ9HD26 462 aa8.59□□□□□ -1.03
COL6A4P1-202ENST00000487147 KIF28PB7ZC32 967 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 SASH3O75995 380 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 CCDC172P0C7W6 258 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 ARID4AP29374 1257 aaPredicted RBP8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 CSGALNACT2Q8N6G5 542 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 MAGEB6Q8N7X4 407 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 TC2NQ8N9U0 490 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 GSDMAQ96QA5 445 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 PLIN2Q99541 437 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 TUBE1Q9UJT0 475 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 CPS1P31327 1500 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 BICDL2A1A5D9 508 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 TEX33O43247 280 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 MAP2K1Q02750 393 aaPredicted RBP8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 PPARDQ03181 441 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 CCDC40Q4G0X9 1142 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 TTC38Q5R3I4 469 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 TRIM65Q6PJ69 517 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 NOC4LQ9BVI4 516 aaKnown RBP8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 NUP58Q9BVL2 599 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 SLC52A2Q9HAB3 445 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 SUGCTQ9HAC7 445 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 KCND1Q9NSA2 647 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 DEPDC5O75140 1603 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 HECW2Q9P2P5 1572 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 A0A1B0GUA9 196 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 CTDSPL2Q05D32 466 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 METTL16Q86W50 562 aaKnown RBP8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 VPS54Q9P1Q0 977 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 FAM169AQ9Y6X4 670 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 V9GY48 417 aaPredicted RBP8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 FOXN1O15353 648 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 N4BP1O75113 896 aaKnown RBP8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 STARD3NLO95772 234 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 ATF3P18847 181 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 KCTD16Q68DU8 428 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 CABS1Q96KC9 395 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 KCNG1Q9UIX4 513 aa8.58□□□□□ -1.04
COL6A4P1-202ENST00000487147 hCG_1642624A0A1W2PR95 340 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 E7EVH7 732 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 H3BQF6 201 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 RAD21O60216 631 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 NDUFA10O95299 355 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 FDPSP14324 419 aaKnown RBP8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 IGHMBP2P38935 993 aaKnown RBP8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 NAA25Q14CX7 972 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 NCAPHQ15003 741 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 SPATS2Q86XZ4 545 aaKnown RBP8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 TRIM58Q8NG06 486 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 HNRNPLLQ8WVV9 542 aaKnown RBP8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 CALML4Q96GE6 196 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 GPR108Q9NPR9 543 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 RTL9Q8NET4 1388 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 ZNF609O15014 1411 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 KIF5BP33176 963 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 MAGEA1P43355 309 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 PAK2Q13177 524 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 CEP85LQ5SZL2 805 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 DTHD1Q6ZMT9 781 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 MIGA1Q8NAN2 632 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 SYMPKQ92797 1274 aaKnown RBP8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 NCAPGQ9BPX3 1015 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 IFIH1Q9BYX4 1025 aaKnown RBP8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 ZNF532Q9HCE3 1301 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 FRMPD1Q5SYB0 1578 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 RFX7Q2KHR2 1363 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 LOC102724159A0A0B4J2E5 919 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 KCNA6P17658 529 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 RNASE9P60153 205 aaKnown RBP8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 TNNC1P63316 161 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 NR5A1Q13285 461 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 PWP2Q15269 919 aaKnown RBP8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 BEND6Q5SZJ8 279 aaPredicted RBP8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 PROSER2Q86WR7 435 aaPredicted RBP8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 HELBQ8NG08 1087 aaPredicted RBP8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 FAM89AQ96GI7 184 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 TBX22Q9Y458 520 aa8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 ARHGEF28Q8N1W1 1705 aaKnown RBP8.57□□□□□ -1.04
COL6A4P1-202ENST00000487147 NUTM2BA6NNL0 878 aaPredicted RBP8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 NUTM2EB1AL46 878 aaPredicted RBP8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 H7C1D1 291 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 CHRM1P11229 460 aaPredicted RBP8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 GNAT2P19087 354 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 CYP7A1P22680 504 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 GGCXP38435 758 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 ARID5AQ03989 594 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 PIK3AP1Q6ZUJ8 805 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 VPS36Q86VN1 386 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 GPIHBP1Q8IV16 184 aa8.56□□□□□ -1.04
COL6A4P1-202ENST00000487147 DCAF5Q96JK2 942 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms