RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 GJC2Q5T442 439 aaPredicted RBP9.43□□□□□ -0.9
PDPN-205ENST00000487038 IL27Q8NEV9 243 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 GAS2L1Q99501 681 aaPredicted RBP9.43□□□□□ -0.9
PDPN-205ENST00000487038 FEZ1Q99689 392 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 PDLIM7Q9NR12 457 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 XIRP2A4UGR9 3374 aa9.43□□□□□ -0.9
PDPN-205ENST00000487038 COL11A1P12107 1806 aaPredicted RBP9.42□□□□□ -0.9
PDPN-205ENST00000487038 MYCNP04198 464 aaPredicted RBP9.42□□□□□ -0.9
PDPN-205ENST00000487038 CYBAP13498 195 aa9.42□□□□□ -0.9
PDPN-205ENST00000487038 GORABQ5T7V8 394 aa9.42□□□□□ -0.9
PDPN-205ENST00000487038 C1orf53Q5VUE5 145 aa9.42□□□□□ -0.9
PDPN-205ENST00000487038 DPP9Q86TI2 863 aa9.42□□□□□ -0.9
PDPN-205ENST00000487038 FOXP4Q8IVH2 680 aaPredicted RBP9.42□□□□□ -0.9
PDPN-205ENST00000487038 SPATA5Q8NB90 893 aa9.42□□□□□ -0.9
PDPN-205ENST00000487038 ATXN2LQ8WWM7 1075 aaKnown RBP9.42□□□□□ -0.9
PDPN-205ENST00000487038 XAGE2Q96GT9 111 aa9.42□□□□□ -0.9
PDPN-205ENST00000487038 C12orf42Q96LP6 360 aa9.42□□□□□ -0.9
PDPN-205ENST00000487038 MRS2Q9HD23 443 aa9.42□□□□□ -0.9
PDPN-205ENST00000487038 COPRSQ9NQ92 184 aa9.42□□□□□ -0.9
PDPN-205ENST00000487038 SLC5A4Q9NY91 659 aa9.42□□□□□ -0.9
PDPN-205ENST00000487038 FLRT1Q9NZU1 646 aa9.42□□□□□ -0.9
PDPN-205ENST00000487038 THEGQ9P2T0 379 aa9.42□□□□□ -0.9
PDPN-205ENST00000487038 MYO9BQ13459 2157 aa9.41□□□□□ -0.9
PDPN-205ENST00000487038 FLT1P17948 1338 aa9.41□□□□□ -0.9
PDPN-205ENST00000487038 SEPT4O43236 478 aa9.41□□□□□ -0.9
PDPN-205ENST00000487038 CLTBP09497 229 aa9.41□□□□□ -0.9
PDPN-205ENST00000487038 DNAJB2P25686 324 aa9.41□□□□□ -0.9
PDPN-205ENST00000487038 CYP2C19P33261 490 aa9.41□□□□□ -0.9
PDPN-205ENST00000487038 TIMM10P62072 90 aa9.41□□□□□ -0.9
PDPN-205ENST00000487038 CCDC184Q52MB2 194 aa9.41□□□□□ -0.9
PDPN-205ENST00000487038 OLFML2BQ68BL8 750 aa9.41□□□□□ -0.9
PDPN-205ENST00000487038 LBX2Q6XYB7 198 aa9.41□□□□□ -0.9
PDPN-205ENST00000487038 SH3RF3Q8TEJ3 882 aaPredicted RBP9.41□□□□□ -0.9
PDPN-205ENST00000487038 EMILIN3Q9NT22 766 aa9.41□□□□□ -0.9
PDPN-205ENST00000487038 AATFQ9NY61 560 aaKnown RBP eCLIP9.41□□□□□ -0.9
PDPN-205ENST00000487038 HMG20BQ9P0W2 317 aa9.41□□□□□ -0.9
PDPN-205ENST00000487038 LRP2BPQ9P2M1 347 aa9.41□□□□□ -0.9
PDPN-205ENST00000487038 TACC3Q9Y6A5 838 aa9.41□□□□□ -0.9
PDPN-205ENST00000487038 NDUFB9Q9Y6M9 179 aa9.41□□□□□ -0.9
PDPN-205ENST00000487038 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.4□□□□□ -0.9
PDPN-205ENST00000487038 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.4□□□□□ -0.9
PDPN-205ENST00000487038 CNMDO75829 334 aa9.4□□□□□ -0.9
PDPN-205ENST00000487038 RAG1P15918 1043 aa9.4□□□□□ -0.9
PDPN-205ENST00000487038 ARID4AP29374 1257 aaPredicted RBP9.4□□□□□ -0.9
PDPN-205ENST00000487038 FPGSQ05932 587 aa9.4□□□□□ -0.9
PDPN-205ENST00000487038 ZYXQ15942 572 aaKnown RBP9.4□□□□□ -0.9
PDPN-205ENST00000487038 NAA16Q6N069 864 aaPredicted RBP9.4□□□□□ -0.9
PDPN-205ENST00000487038 CCDC174Q6PII3 467 aa9.4□□□□□ -0.9
PDPN-205ENST00000487038 METTL16Q86W50 562 aaKnown RBP9.4□□□□□ -0.9
PDPN-205ENST00000487038 MAPKAPK5Q8IW41 473 aa9.4□□□□□ -0.9
PDPN-205ENST00000487038 NPLOC4Q8TAT6 608 aa9.4□□□□□ -0.9
PDPN-205ENST00000487038 ZNF384Q8TF68 577 aa9.4□□□□□ -0.9
PDPN-205ENST00000487038 TGFBRAP1Q8WUH2 860 aa9.4□□□□□ -0.9
PDPN-205ENST00000487038 NEUROD6Q96NK8 337 aa9.4□□□□□ -0.9
PDPN-205ENST00000487038 DNAJC18Q9H819 358 aa9.4□□□□□ -0.9
PDPN-205ENST00000487038 PA2G4Q9UQ80 394 aaKnown RBP9.4□□□□□ -0.9
PDPN-205ENST00000487038 TRIM43BA6NCK2 446 aa9.39□□□□□ -0.91
PDPN-205ENST00000487038 STRNO43815 780 aa9.39□□□□□ -0.91
PDPN-205ENST00000487038 IGSF3O75054 1194 aa9.39□□□□□ -0.91
PDPN-205ENST00000487038 UQCRFS1P1P0C7P4 283 aa9.39□□□□□ -0.91
PDPN-205ENST00000487038 VCAM1P19320 739 aa9.39□□□□□ -0.91
PDPN-205ENST00000487038 ADORA2AP29274 412 aa9.39□□□□□ -0.91
PDPN-205ENST00000487038 ADCYAP1R1P41586 468 aa9.39□□□□□ -0.91
PDPN-205ENST00000487038 GRIN2CQ14957 1233 aa9.39□□□□□ -0.91
PDPN-205ENST00000487038 ALDH1L2Q3SY69 923 aa9.39□□□□□ -0.91
PDPN-205ENST00000487038 ANO1Q5XXA6 986 aa9.39□□□□□ -0.91
PDPN-205ENST00000487038 CATSPERGQ6ZRH7 1159 aa9.39□□□□□ -0.91
PDPN-205ENST00000487038 RNF180Q86T96 592 aa9.39□□□□□ -0.91
PDPN-205ENST00000487038 CERS3Q8IU89 383 aa9.39□□□□□ -0.91
PDPN-205ENST00000487038 USP38Q8NB14 1042 aa9.39□□□□□ -0.91
PDPN-205ENST00000487038 TRPV1Q8NER1 839 aa9.39□□□□□ -0.91
PDPN-205ENST00000487038 ADAMTS19Q8TE59 1207 aa9.39□□□□□ -0.91
PDPN-205ENST00000487038 TRIM43Q96BQ3 446 aaPredicted RBP9.39□□□□□ -0.91
PDPN-205ENST00000487038 TIFAQ96CG3 184 aa9.39□□□□□ -0.91
PDPN-205ENST00000487038 TSPYL2Q9H2G4 693 aaPredicted RBP9.39□□□□□ -0.91
PDPN-205ENST00000487038 ZNF576Q9H609 170 aa9.39□□□□□ -0.91
PDPN-205ENST00000487038 REV3LO60673 3130 aa9.39□□□□□ -0.91
PDPN-205ENST00000487038 CHD7Q9P2D1 2997 aa9.39□□□□□ -0.91
PDPN-205ENST00000487038 TRANK1O15050 2925 aa9.38□□□□□ -0.91
PDPN-205ENST00000487038 SPDYE16A6NNV3 312 aaPredicted RBP9.38□□□□□ -0.91
PDPN-205ENST00000487038 GH2P01242 217 aa9.38□□□□□ -0.91
PDPN-205ENST00000487038 RARBP10826 455 aa9.38□□□□□ -0.91
PDPN-205ENST00000487038 MRPS5P82675 430 aaKnown RBP9.38□□□□□ -0.91
PDPN-205ENST00000487038 TLE2Q04725 743 aa9.38□□□□□ -0.91
PDPN-205ENST00000487038 TFCP2Q12800 502 aa9.38□□□□□ -0.91
PDPN-205ENST00000487038 RAB3GAP1Q15042 981 aa9.38□□□□□ -0.91
PDPN-205ENST00000487038 LRRC41Q15345 812 aa9.38□□□□□ -0.91
PDPN-205ENST00000487038 AKNAD1Q5T1N1 836 aa9.38□□□□□ -0.91
PDPN-205ENST00000487038 PI16Q6UXB8 463 aa9.38□□□□□ -0.91
PDPN-205ENST00000487038 TBC1D9Q6ZT07 1266 aa9.38□□□□□ -0.91
PDPN-205ENST00000487038 SH3RF1Q7Z6J0 888 aa9.38□□□□□ -0.91
PDPN-205ENST00000487038 SHCBP1Q8NEM2 672 aa9.38□□□□□ -0.91
PDPN-205ENST00000487038 SSH1Q8WYL5 1049 aa9.38□□□□□ -0.91
PDPN-205ENST00000487038 FERMT2Q96AC1 680 aa9.38□□□□□ -0.91
PDPN-205ENST00000487038 ASB2Q96Q27 587 aa9.38□□□□□ -0.91
PDPN-205ENST00000487038 UHRF1Q96T88 793 aaPredicted RBP9.38□□□□□ -0.91
PDPN-205ENST00000487038 C1QTNF1Q9BXJ1 281 aa9.38□□□□□ -0.91
PDPN-205ENST00000487038 KIAA1683Q9H0B3 1180 aa9.38□□□□□ -0.91
PDPN-205ENST00000487038 CABP5Q9NP86 173 aa9.38□□□□□ -0.91
PDPN-205ENST00000487038 PALD1Q9ULE6 856 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms