RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 APBA3O96018 575 aa8.41□□□□□ -1.06
SMARCAL1-212ENST00000486983 PTH1RQ03431 593 aa8.41□□□□□ -1.06
SMARCAL1-212ENST00000486983 COL9A3Q14050 684 aaPredicted RBP8.41□□□□□ -1.06
SMARCAL1-212ENST00000486983 ZSCAN23Q3MJ62 389 aa8.41□□□□□ -1.06
SMARCAL1-212ENST00000486983 CREB3L3Q68CJ9 461 aa8.41□□□□□ -1.06
SMARCAL1-212ENST00000486983 PRPF40BQ6NWY9 871 aaKnown RBP8.41□□□□□ -1.06
SMARCAL1-212ENST00000486983 HAUS7Q99871 368 aa8.41□□□□□ -1.06
SMARCAL1-212ENST00000486983 ISCA1Q9BUE6 129 aa8.41□□□□□ -1.06
SMARCAL1-212ENST00000486983 PLA2G12BQ9BX93 195 aa8.41□□□□□ -1.06
SMARCAL1-212ENST00000486983 SIL1Q9H173 461 aa8.41□□□□□ -1.06
SMARCAL1-212ENST00000486983 PDRG1Q9NUG6 133 aa8.41□□□□□ -1.06
SMARCAL1-212ENST00000486983 SERTAD1Q9UHV2 236 aa8.41□□□□□ -1.06
SMARCAL1-212ENST00000486983 TBC1D2BQ9UPU7 963 aa8.41□□□□□ -1.06
SMARCAL1-212ENST00000486983 ATP6V1DQ9Y5K8 247 aa8.41□□□□□ -1.06
SMARCAL1-212ENST00000486983 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.41□□□□□ -1.06
SMARCAL1-212ENST00000486983 COL16A1Q07092 1604 aaPredicted RBP8.4□□□□□ -1.06
SMARCAL1-212ENST00000486983 CICQ96RK0 1608 aaPredicted RBP8.4□□□□□ -1.06
SMARCAL1-212ENST00000486983 A0A0D9SFI3 127 aa8.4□□□□□ -1.06
SMARCAL1-212ENST00000486983 SLC27A2O14975 620 aa8.4□□□□□ -1.06
SMARCAL1-212ENST00000486983 PRPF40AO75400 957 aaKnown RBP8.4□□□□□ -1.06
SMARCAL1-212ENST00000486983 ZSCAN22P10073 491 aaPredicted RBP8.4□□□□□ -1.06
SMARCAL1-212ENST00000486983 TFCP2Q12800 502 aa8.4□□□□□ -1.06
SMARCAL1-212ENST00000486983 PRSS36Q5K4E3 855 aa8.4□□□□□ -1.06
SMARCAL1-212ENST00000486983 LMBR1LQ6UX01 489 aa8.4□□□□□ -1.06
SMARCAL1-212ENST00000486983 SYT9Q86SS6 491 aa8.4□□□□□ -1.06
SMARCAL1-212ENST00000486983 GAS2L3Q86XJ1 694 aa8.4□□□□□ -1.06
SMARCAL1-212ENST00000486983 GPT2Q8TD30 523 aa8.4□□□□□ -1.06
SMARCAL1-212ENST00000486983 SYAP1Q96A49 352 aaPredicted RBP8.4□□□□□ -1.06
SMARCAL1-212ENST00000486983 FAM227BQ96M60 508 aa8.4□□□□□ -1.06
SMARCAL1-212ENST00000486983 JAKMIP1Q96N16 626 aaKnown RBP8.4□□□□□ -1.06
SMARCAL1-212ENST00000486983 BOLA2Q9H3K6 86 aa8.4□□□□□ -1.06
SMARCAL1-212ENST00000486983 TMOD3Q9NYL9 352 aa8.4□□□□□ -1.06
SMARCAL1-212ENST00000486983 GJA3Q9Y6H8 435 aa8.4□□□□□ -1.06
SMARCAL1-212ENST00000486983 BCL9O00512 1426 aa8.39□□□□□ -1.07
SMARCAL1-212ENST00000486983 CDHR2Q9BYE9 1310 aa8.39□□□□□ -1.07
SMARCAL1-212ENST00000486983 WNK3Q9BYP7 1800 aa8.39□□□□□ -1.07
SMARCAL1-212ENST00000486983 TMEM229AB2RXF0 380 aa8.39□□□□□ -1.07
SMARCAL1-212ENST00000486983 EYA2O00167 538 aa8.39□□□□□ -1.07
SMARCAL1-212ENST00000486983 PTCD1O75127 700 aaKnown RBP8.39□□□□□ -1.07
SMARCAL1-212ENST00000486983 TAF5LO75529 589 aa8.39□□□□□ -1.07
SMARCAL1-212ENST00000486983 KCNJ4P48050 445 aa8.39□□□□□ -1.07
SMARCAL1-212ENST00000486983 CCDC173Q0VFZ6 552 aa8.39□□□□□ -1.07
SMARCAL1-212ENST00000486983 LAMC2Q13753 1193 aa8.39□□□□□ -1.07
SMARCAL1-212ENST00000486983 MTFR1Q15390 333 aa8.39□□□□□ -1.07
SMARCAL1-212ENST00000486983 CAVIN1Q6NZI2 390 aaKnown RBP8.39□□□□□ -1.07
SMARCAL1-212ENST00000486983 TTLL7Q6ZT98 887 aa8.39□□□□□ -1.07
SMARCAL1-212ENST00000486983 ATG9AQ7Z3C6 839 aa8.39□□□□□ -1.07
SMARCAL1-212ENST00000486983 KBTBD3Q8NAB2 608 aa8.39□□□□□ -1.07
SMARCAL1-212ENST00000486983 KLHDC4Q8TBB5 520 aa8.39□□□□□ -1.07
SMARCAL1-212ENST00000486983 PPP1R9BQ96SB3 815 aa8.39□□□□□ -1.07
SMARCAL1-212ENST00000486983 PANK2Q9BZ23 570 aa8.39□□□□□ -1.07
SMARCAL1-212ENST00000486983 SMC3Q9UQE7 1217 aa8.39□□□□□ -1.07
SMARCAL1-212ENST00000486983 SPATA31A6Q5VVP1 1343 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 A6NJY4 79 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 M0R082 166 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 STX6O43752 255 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 STARD3NLO95772 234 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 A1BGP04217 495 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 PCCAP05165 728 aaPredicted RBP8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 PDCP20941 246 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 ALAS2P22557 587 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 RPS6KB1P23443 525 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 PIP4K2AP48426 406 aaPredicted RBP8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 NASPP49321 788 aaPredicted RBP8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 EVA1CP58658 441 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 TCIRG1Q13488 830 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 IRF5Q13568 498 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 LRRFIP1Q32MZ4 808 aaKnown RBP8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 ADCK5Q3MIX3 580 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 MCMDC2Q4G0Z9 681 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 HSP90AB3PQ58FF7 597 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 BLOC1S2Q6QNY1 142 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 LRSAM1Q6UWE0 723 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 KIF6Q6ZMV9 814 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 ZNF417Q8TAU3 575 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 ANP32BQ92688 251 aaKnown RBP8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 SLC4A9Q96Q91 983 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 ZNF587Q96SQ5 575 aaPredicted RBP8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 DBNDD2Q9BQY9 259 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 HELLSQ9NRZ9 838 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 LRP5O75197 1615 aa8.38□□□□□ -1.07
SMARCAL1-212ENST00000486983 CDK2AP1O14519 115 aa8.37□□□□□ -1.07
SMARCAL1-212ENST00000486983 F13A1P00488 732 aa8.37□□□□□ -1.07
SMARCAL1-212ENST00000486983 HMGB1P09429 215 aaKnown RBP8.37□□□□□ -1.07
SMARCAL1-212ENST00000486983 NCLP19338 710 aaKnown RBP8.37□□□□□ -1.07
SMARCAL1-212ENST00000486983 SYT1P21579 422 aa8.37□□□□□ -1.07
SMARCAL1-212ENST00000486983 RXRBP28702 533 aa8.37□□□□□ -1.07
SMARCAL1-212ENST00000486983 ZNF772Q68DY9 489 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-212ENST00000486983 BICDL1Q6ZP65 573 aa8.37□□□□□ -1.07
SMARCAL1-212ENST00000486983 NOL8Q76FK4 1167 aaKnown RBP8.37□□□□□ -1.07
SMARCAL1-212ENST00000486983 ZNF589Q86UQ0 364 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-212ENST00000486983 ZBTB38Q8NAP3 1195 aaPredicted RBP8.37□□□□□ -1.07
SMARCAL1-212ENST00000486983 DDX54Q8TDD1 881 aaKnown RBP8.37□□□□□ -1.07
SMARCAL1-212ENST00000486983 C8orf37Q96NL8 207 aa8.37□□□□□ -1.07
SMARCAL1-212ENST00000486983 DSCC1Q9BVC3 393 aa8.37□□□□□ -1.07
SMARCAL1-212ENST00000486983 AKAP2Q9Y2D5 859 aa8.37□□□□□ -1.07
SMARCAL1-212ENST00000486983 STARD13Q9Y3M8 1113 aa8.37□□□□□ -1.07
SMARCAL1-212ENST00000486983 PARP3Q9Y6F1 533 aa8.37□□□□□ -1.07
SMARCAL1-212ENST00000486983 AFF2P51816 1311 aa8.36□□□□□ -1.07
SMARCAL1-212ENST00000486983 MAP3K15Q6ZN16 1313 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms