RNA–Protein interactions for RNA: ENST00000486902.5

PDE9A-223, Transcript of phosphodiesterase 9A, human

TSL 2

Gene PDE9A, Length 794 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDE9A-223	ENST00000486902	ERVK-9	P63128	1117 aa		11.36	□□□□□ -0.59
PDE9A-223	ENST00000486902	ERVK-24	P63145	666 aa		11.36	□□□□□ -0.59
PDE9A-223	ENST00000486902	FKBP5	Q13451	457 aa	Predicted RBP	11.36	□□□□□ -0.59
PDE9A-223	ENST00000486902	SH3D19	Q5HYK7	790 aa		11.36	□□□□□ -0.59
PDE9A-223	ENST00000486902	CCDC129	Q6ZRS4	1044 aa		11.36	□□□□□ -0.59
PDE9A-223	ENST00000486902	CCAR1	Q8IX12	1150 aa	Known RBP	11.36	□□□□□ -0.59
PDE9A-223	ENST00000486902	MICALL1	Q8N3F8	863 aa		11.36	□□□□□ -0.59
PDE9A-223	ENST00000486902	PAGR1	Q9BTK6	254 aa		11.36	□□□□□ -0.59
PDE9A-223	ENST00000486902	CHMP4A	Q9BY43	222 aa		11.36	□□□□□ -0.59
PDE9A-223	ENST00000486902	MROH5	Q6ZUA9	1318 aa		11.35	□□□□□ -0.59
PDE9A-223	ENST00000486902	KIAA0355	O15063	1070 aa		11.35	□□□□□ -0.59
PDE9A-223	ENST00000486902	CLTB	P09497	229 aa		11.35	□□□□□ -0.59
PDE9A-223	ENST00000486902	CYBA	P13498	195 aa		11.35	□□□□□ -0.59
PDE9A-223	ENST00000486902	RAG1	P15918	1043 aa		11.35	□□□□□ -0.59
PDE9A-223	ENST00000486902	PICALM	Q13492	652 aa		11.35	□□□□□ -0.59
PDE9A-223	ENST00000486902	RRP1B	Q14684	758 aa	Known RBP	11.35	□□□□□ -0.59
PDE9A-223	ENST00000486902	LRRC24	Q50LG9	513 aa		11.35	□□□□□ -0.59
PDE9A-223	ENST00000486902	METTL24	Q5JXM2	366 aa		11.35	□□□□□ -0.59
PDE9A-223	ENST00000486902	VGLL2	Q8N8G2	317 aa		11.35	□□□□□ -0.59
PDE9A-223	ENST00000486902	ARRDC4	Q8NCT1	418 aa		11.35	□□□□□ -0.59
PDE9A-223	ENST00000486902	WDR66	Q8TBY9	1149 aa		11.35	□□□□□ -0.59
PDE9A-223	ENST00000486902	EDC3	Q96F86	508 aa	Known RBP	11.35	□□□□□ -0.59
PDE9A-223	ENST00000486902	FAM163A	Q96GL9	167 aa	Predicted RBP	11.35	□□□□□ -0.59
PDE9A-223	ENST00000486902	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
PDE9A-223	ENST00000486902	TACC3	Q9Y6A5	838 aa		11.35	□□□□□ -0.59
PDE9A-223	ENST00000486902	HOXA7	P31268	230 aa	Predicted RBP	11.34	□□□□□ -0.59
PDE9A-223	ENST00000486902	NHLH1	Q02575	133 aa		11.34	□□□□□ -0.59
PDE9A-223	ENST00000486902	MTMR2	Q13614	643 aa		11.34	□□□□□ -0.59
PDE9A-223	ENST00000486902	AAK1	Q2M2I8	961 aa		11.34	□□□□□ -0.59
PDE9A-223	ENST00000486902	C1orf53	Q5VUE5	145 aa		11.34	□□□□□ -0.59
PDE9A-223	ENST00000486902	NPLOC4	Q8TAT6	608 aa		11.34	□□□□□ -0.59
PDE9A-223	ENST00000486902	CWC22	Q9HCG8	908 aa	Known RBP	11.34	□□□□□ -0.59
PDE9A-223	ENST00000486902	USP17L5	A8MUK1	530 aa		11.33	□□□□□ -0.6
PDE9A-223	ENST00000486902		F6X3S4	739 aa		11.33	□□□□□ -0.6
PDE9A-223	ENST00000486902	SMIM22	K7EJ46	135 aa		11.33	□□□□□ -0.6
PDE9A-223	ENST00000486902	LDHB	P07195	334 aa	Known RBP	11.33	□□□□□ -0.6
PDE9A-223	ENST00000486902	ATP2B2	Q01814	1243 aa		11.33	□□□□□ -0.6
PDE9A-223	ENST00000486902	LRRC41	Q15345	812 aa		11.33	□□□□□ -0.6
PDE9A-223	ENST00000486902	SKIV2L	Q15477	1246 aa	Known RBP	11.33	□□□□□ -0.6
PDE9A-223	ENST00000486902	BEND3	Q5T5X7	828 aa		11.33	□□□□□ -0.6
PDE9A-223	ENST00000486902	TSR2	Q969E8	191 aa	Known RBP	11.33	□□□□□ -0.6
PDE9A-223	ENST00000486902	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.33	□□□□□ -0.6
PDE9A-223	ENST00000486902	NKX2-4	Q9H2Z4	354 aa		11.33	□□□□□ -0.6
PDE9A-223	ENST00000486902	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.33	□□□□□ -0.6	4e-7	■■■■■ 54.2
PDE9A-223	ENST00000486902	PLXNA1	Q9UIW2	1896 aa		11.33	□□□□□ -0.6
PDE9A-223	ENST00000486902	GRM8	O00222	908 aa		11.32	□□□□□ -0.6
PDE9A-223	ENST00000486902	ERC2	O15083	957 aa		11.32	□□□□□ -0.6
PDE9A-223	ENST00000486902	PQBP1	O60828	265 aa	Known RBP	11.32	□□□□□ -0.6
PDE9A-223	ENST00000486902	PDE8B	O95263	885 aa		11.32	□□□□□ -0.6
PDE9A-223	ENST00000486902	IGHA2	P01877	340 aa		11.32	□□□□□ -0.6
PDE9A-223	ENST00000486902	WDR78	Q5VTH9	848 aa		11.32	□□□□□ -0.6
PDE9A-223	ENST00000486902	PDCD7	Q8N8D1	485 aa	Known RBP	11.32	□□□□□ -0.6
PDE9A-223	ENST00000486902	TBC1D2	Q9BYX2	928 aa		11.32	□□□□□ -0.6
PDE9A-223	ENST00000486902	GAK	O14976	1311 aa		11.32	□□□□□ -0.6
PDE9A-223	ENST00000486902	SLC15A5	A6NIM6	579 aa		11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	TLL1	O43897	1013 aa		11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	TBC1D12	O60347	775 aa		11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	CNMD	O75829	334 aa		11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	HOXC6	P09630	235 aa		11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	FGFR2	P21802	821 aa		11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	CAP2	P40123	477 aa		11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	BACE1	P56817	501 aa		11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	CALD1	Q05682	793 aa	Known RBP	11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	FAM47A	Q5JRC9	791 aa		11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	TMEM240	Q5SV17	173 aa		11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	RASIP1	Q5U651	963 aa		11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	C16orf59	Q7L2K0	433 aa		11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	RNF25	Q96BH1	459 aa	Predicted RBP	11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	KAZALD1	Q96I82	304 aa		11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	SUCLG2	Q96I99	432 aa		11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	CD320	Q9NPF0	282 aa		11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	TMEM39A	Q9NV64	488 aa		11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	PPP4R2	Q9NY27	417 aa		11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	TMOD4	Q9NZQ9	345 aa		11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	YBX2	Q9Y2T7	364 aa	Known RBP	11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	SALL2	Q9Y467	1007 aa	Predicted RBP	11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	KIF16B	Q96L93	1317 aa		11.31	□□□□□ -0.6
PDE9A-223	ENST00000486902	LRRC37A2	A6NM11	1700 aa		11.3	□□□□□ -0.6
PDE9A-223	ENST00000486902	RIOK3	O14730	519 aa	Known RBP	11.3	□□□□□ -0.6
PDE9A-223	ENST00000486902	IFIT1	P09914	478 aa	Known RBP	11.3	□□□□□ -0.6
PDE9A-223	ENST00000486902	PTPRE	P23469	700 aa		11.3	□□□□□ -0.6
PDE9A-223	ENST00000486902	JAG1	P78504	1218 aa		11.3	□□□□□ -0.6
PDE9A-223	ENST00000486902	PUM3	Q15397	648 aa	Known RBP	11.3	□□□□□ -0.6
PDE9A-223	ENST00000486902	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.3	□□□□□ -0.6
PDE9A-223	ENST00000486902	TWISTNB	Q3B726	338 aa	Predicted RBP	11.3	□□□□□ -0.6
PDE9A-223	ENST00000486902	WDR18	Q9BV38	432 aa		11.3	□□□□□ -0.6
PDE9A-223	ENST00000486902	AS3MT	Q9HBK9	375 aa		11.3	□□□□□ -0.6
PDE9A-223	ENST00000486902	RCAN3	Q9UKA8	241 aa		11.3	□□□□□ -0.6
PDE9A-223	ENST00000486902	PRR33	A8MZF0	331 aa		11.29	□□□□□ -0.6
PDE9A-223	ENST00000486902	PI4K2B	G5E9Z4	385 aa		11.29	□□□□□ -0.6
PDE9A-223	ENST00000486902	APAF1	O14727	1248 aa		11.29	□□□□□ -0.6
PDE9A-223	ENST00000486902	SEPT4	O43236	478 aa		11.29	□□□□□ -0.6
PDE9A-223	ENST00000486902	GLRX3	O76003	335 aa	Known RBP	11.29	□□□□□ -0.6
PDE9A-223	ENST00000486902	BTD	P43251	543 aa		11.29	□□□□□ -0.6
PDE9A-223	ENST00000486902	FAAP100	Q0VG06	881 aa		11.29	□□□□□ -0.6
PDE9A-223	ENST00000486902	GRB14	Q14449	540 aa		11.29	□□□□□ -0.6
PDE9A-223	ENST00000486902	RAB30	Q15771	203 aa		11.29	□□□□□ -0.6
PDE9A-223	ENST00000486902	SLC44A5	Q8NCS7	719 aa		11.29	□□□□□ -0.6
PDE9A-223	ENST00000486902	KLHDC4	Q8TBB5	520 aa		11.29	□□□□□ -0.6
PDE9A-223	ENST00000486902	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms