RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 REXO1Q8N1G1 1221 aaKnown RBP7.53□□□□□ -1.2
COPS3-209ENST00000486810 NETO1Q8TDF5 533 aa7.53□□□□□ -1.2
COPS3-209ENST00000486810 PRDM5Q9NQX1 630 aaPredicted RBP7.53□□□□□ -1.2
COPS3-209ENST00000486810 IGSF5Q9NSI5 407 aa7.53□□□□□ -1.2
COPS3-209ENST00000486810 BSDC1Q9NW68 430 aaPredicted RBP7.53□□□□□ -1.2
COPS3-209ENST00000486810 MAPK8IP1Q9UQF2 711 aa7.53□□□□□ -1.2
COPS3-209ENST00000486810 ZNF865P0CJ78 1059 aaPredicted RBP7.52□□□□□ -1.21
COPS3-209ENST00000486810 BNIP3Q12983 259 aa7.52□□□□□ -1.21
COPS3-209ENST00000486810 C22orf34Q6ZV56 151 aa7.52□□□□□ -1.21
COPS3-209ENST00000486810 DHX37Q8IY37 1157 aaKnown RBP7.52□□□□□ -1.21
COPS3-209ENST00000486810 BAHD1Q8TBE0 780 aaPredicted RBP7.52□□□□□ -1.21
COPS3-209ENST00000486810 CYB5D2Q8WUJ1 264 aa7.52□□□□□ -1.21
COPS3-209ENST00000486810 BCL7CQ8WUZ0 217 aaPredicted RBP7.52□□□□□ -1.21
COPS3-209ENST00000486810 ACBD3Q9H3P7 528 aa7.52□□□□□ -1.21
COPS3-209ENST00000486810 CEP131Q9UPN4 1083 aa7.52□□□□□ -1.21
COPS3-209ENST00000486810 HMGB1P09429 215 aaKnown RBP7.51□□□□□ -1.21
COPS3-209ENST00000486810 MCM4P33991 863 aa7.51□□□□□ -1.21
COPS3-209ENST00000486810 CD96P40200 585 aa7.51□□□□□ -1.21
COPS3-209ENST00000486810 YARSP54577 528 aaKnown RBP7.51□□□□□ -1.21
COPS3-209ENST00000486810 RBM10P98175 930 aaKnown RBP7.51□□□□□ -1.21
COPS3-209ENST00000486810 IFI16Q16666 785 aaKnown RBP7.51□□□□□ -1.21
COPS3-209ENST00000486810 SFRP5Q5T4F7 317 aa7.51□□□□□ -1.21
COPS3-209ENST00000486810 OVOS1Q6IE37 1185 aa7.51□□□□□ -1.21
COPS3-209ENST00000486810 ZNF574Q6ZN55 896 aaPredicted RBP7.51□□□□□ -1.21
COPS3-209ENST00000486810 SPRED2Q7Z698 418 aa7.51□□□□□ -1.21
COPS3-209ENST00000486810 TGIF2Q9GZN2 237 aa7.51□□□□□ -1.21
COPS3-209ENST00000486810 TPX2Q9ULW0 747 aaKnown RBP7.51□□□□□ -1.21
COPS3-209ENST00000486810 CAPN6Q9Y6Q1 641 aa7.51□□□□□ -1.21
COPS3-209ENST00000486810 TCF3P15923 654 aa7.5□□□□□ -1.21
COPS3-209ENST00000486810 TNNI2P48788 182 aa7.5□□□□□ -1.21
COPS3-209ENST00000486810 ZNF165P49910 485 aa7.5□□□□□ -1.21
COPS3-209ENST00000486810 ARSHQ5FYA8 562 aa7.5□□□□□ -1.21
COPS3-209ENST00000486810 VSIG10LQ86VR7 867 aa7.5□□□□□ -1.21
COPS3-209ENST00000486810 ATG4CQ96DT6 458 aa7.5□□□□□ -1.21
COPS3-209ENST00000486810 Q96M66 194 aa7.5□□□□□ -1.21
COPS3-209ENST00000486810 KIF2CQ99661 725 aa7.5□□□□□ -1.21
COPS3-209ENST00000486810 GINM1Q9NU53 330 aa7.5□□□□□ -1.21
COPS3-209ENST00000486810 GMIPQ9P107 970 aa7.5□□□□□ -1.21
COPS3-209ENST00000486810 MEIS3P2A8K0S8 358 aa7.49□□□□□ -1.21
COPS3-209ENST00000486810 UBOX5O94941 541 aa7.49□□□□□ -1.21
COPS3-209ENST00000486810 WNT11O96014 354 aa7.49□□□□□ -1.21
COPS3-209ENST00000486810 POLR2BP30876 1174 aaKnown RBP7.49□□□□□ -1.21
COPS3-209ENST00000486810 GJA8P48165 433 aa7.49□□□□□ -1.21
COPS3-209ENST00000486810 GP2P55259 537 aaKnown RBP7.49□□□□□ -1.21
COPS3-209ENST00000486810 CDCP2Q5VXM1 449 aa7.49□□□□□ -1.21
COPS3-209ENST00000486810 RASGRP4Q8TDF6 673 aa7.49□□□□□ -1.21
COPS3-209ENST00000486810 VWCEQ96DN2 955 aa7.49□□□□□ -1.21
COPS3-209ENST00000486810 CCDC74BQ96LY2 380 aa7.49□□□□□ -1.21
COPS3-209ENST00000486810 CNNM2Q9H8M5 875 aa7.49□□□□□ -1.21
COPS3-209ENST00000486810 PAK6Q9NQU5 681 aaPredicted RBP7.49□□□□□ -1.21
COPS3-209ENST00000486810 ZNRF3Q9ULT6 936 aa7.49□□□□□ -1.21
COPS3-209ENST00000486810 ST14Q9Y5Y6 855 aa7.49□□□□□ -1.21
COPS3-209ENST00000486810 OAS3Q9Y6K5 1087 aaKnown RBP7.49□□□□□ -1.21
COPS3-209ENST00000486810 CBX7O95931 251 aa7.48□□□□□ -1.21
COPS3-209ENST00000486810 PRKCQQ04759 706 aa7.48□□□□□ -1.21
COPS3-209ENST00000486810 TNK2Q07912 1038 aa7.48□□□□□ -1.21
COPS3-209ENST00000486810 ARHGAP27Q6ZUM4 889 aa7.48□□□□□ -1.21
COPS3-209ENST00000486810 GPRASP2Q96D09 838 aa7.48□□□□□ -1.21
COPS3-209ENST00000486810 SEMA3GQ9NS98 782 aa7.48□□□□□ -1.21
COPS3-209ENST00000486810 PPT2Q9UMR5 302 aa7.48□□□□□ -1.21
COPS3-209ENST00000486810 TMEM265A0A087WTH1 108 aa7.47□□□□□ -1.21
COPS3-209ENST00000486810 GNAT3A8MTJ3 354 aa7.47□□□□□ -1.21
COPS3-209ENST00000486810 RGS13O14921 159 aa7.47□□□□□ -1.21
COPS3-209ENST00000486810 LRRN2O75325 713 aa7.47□□□□□ -1.21
COPS3-209ENST00000486810 CD8BP10966 210 aa7.47□□□□□ -1.21
COPS3-209ENST00000486810 NME1P15531 152 aaKnown RBP7.47□□□□□ -1.21
COPS3-209ENST00000486810 ZNF746Q6NUN9 644 aaPredicted RBP7.47□□□□□ -1.21
COPS3-209ENST00000486810 PHACTR4Q8IZ21 702 aa7.47□□□□□ -1.21
COPS3-209ENST00000486810 MFSD4AQ8N468 514 aa7.47□□□□□ -1.21
COPS3-209ENST00000486810 TMEM40Q8WWA1 233 aa7.47□□□□□ -1.21
COPS3-209ENST00000486810 CCDC136Q96JN2 1154 aa7.47□□□□□ -1.21
COPS3-209ENST00000486810 VAV3Q9UKW4 847 aa7.47□□□□□ -1.21
COPS3-209ENST00000486810 SNX11Q9Y5W9 270 aa7.47□□□□□ -1.21
COPS3-209ENST00000486810 PITPNM2Q9BZ72 1349 aa7.47□□□□□ -1.21
COPS3-209ENST00000486810 ACRP10323 421 aa7.46□□□□□ -1.22
COPS3-209ENST00000486810 ERCC5P28715 1186 aaPredicted RBP7.46□□□□□ -1.22
COPS3-209ENST00000486810 ETV3P41162 512 aa7.46□□□□□ -1.22
COPS3-209ENST00000486810 SOX9P48436 509 aa7.46□□□□□ -1.22
COPS3-209ENST00000486810 AOC3Q16853 763 aa7.46□□□□□ -1.22
COPS3-209ENST00000486810 NLRC3Q7RTR2 1065 aa7.46□□□□□ -1.22
COPS3-209ENST00000486810 NBPF11Q86T75 865 aa7.46□□□□□ -1.22
COPS3-209ENST00000486810 MISP3Q96FF7 219 aa7.46□□□□□ -1.22
COPS3-209ENST00000486810 HRASLS5Q96KN8 279 aa7.46□□□□□ -1.22
COPS3-209ENST00000486810 HSPA12BQ96MM6 686 aa7.46□□□□□ -1.22
COPS3-209ENST00000486810 KREMEN1Q96MU8 473 aa7.46□□□□□ -1.22
COPS3-209ENST00000486810 SLC5A6Q9Y289 635 aa7.46□□□□□ -1.22
COPS3-209ENST00000486810 EFR3BQ9Y2G0 817 aa7.46□□□□□ -1.22
COPS3-209ENST00000486810 WASH4PA8MWX3 477 aa7.45□□□□□ -1.22
COPS3-209ENST00000486810 TNFRSF10CO14798 259 aa7.45□□□□□ -1.22
COPS3-209ENST00000486810 KIR3DL1P43629 444 aa7.45□□□□□ -1.22
COPS3-209ENST00000486810 CLCN7P51798 805 aa7.45□□□□□ -1.22
COPS3-209ENST00000486810 CDKAL1Q5VV42 579 aa7.45□□□□□ -1.22
COPS3-209ENST00000486810 CCDC81Q6ZN84 652 aa7.45□□□□□ -1.22
COPS3-209ENST00000486810 ABI1Q8IZP0 508 aa7.45□□□□□ -1.22
COPS3-209ENST00000486810 FLCNQ8NFG4 579 aa7.45□□□□□ -1.22
COPS3-209ENST00000486810 RNF141Q8WVD5 230 aa7.45□□□□□ -1.22
COPS3-209ENST00000486810 COX4I2Q96KJ9 171 aa7.45□□□□□ -1.22
COPS3-209ENST00000486810 SLC9A7Q96T83 725 aa7.45□□□□□ -1.22
COPS3-209ENST00000486810 ANGEL1Q9UNK9 670 aaKnown RBP7.45□□□□□ -1.22
COPS3-209ENST00000486810 RAG1P15918 1043 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms