RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 NEDD1Q8NHV4 660 aa13.79□□□□□ -0.2
PKP4-213ENST00000486254 KAT14Q9H8E8 782 aa13.79□□□□□ -0.2
PKP4-213ENST00000486254 MKNK2Q9HBH9 465 aa13.79□□□□□ -0.2
PKP4-213ENST00000486254 BRMS1Q9HCU9 246 aa13.79□□□□□ -0.2
PKP4-213ENST00000486254 STK32BQ9NY57 414 aa13.79□□□□□ -0.2
PKP4-213ENST00000486254 HPSEQ9Y251 543 aa13.79□□□□□ -0.2
PKP4-213ENST00000486254 PSME4Q14997 1843 aa13.79□□□□□ -0.2
PKP4-213ENST00000486254 SLX4Q8IY92 1834 aa13.79□□□□□ -0.2
PKP4-213ENST00000486254 TRAPPC10P48553 1259 aa13.79□□□□□ -0.2
PKP4-213ENST00000486254 GTF2IP78347 998 aa13.79□□□□□ -0.2
PKP4-213ENST00000486254 TFAP4Q01664 338 aa13.79□□□□□ -0.2
PKP4-213ENST00000486254 STX1AQ16623 288 aa13.79□□□□□ -0.2
PKP4-213ENST00000486254 C2CD5Q86YS7 1000 aa13.79□□□□□ -0.2
PKP4-213ENST00000486254 ZNF444Q8N0Y2 327 aaPredicted RBP13.79□□□□□ -0.2
PKP4-213ENST00000486254 IL17RBQ9NRM6 502 aa13.79□□□□□ -0.2
PKP4-213ENST00000486254 RGS17Q9UGC6 210 aaPredicted RBP13.79□□□□□ -0.2
PKP4-213ENST00000486254 MYH8P13535 1937 aa13.78□□□□□ -0.2
PKP4-213ENST00000486254 GREB1LQ9C091 1923 aaPredicted RBP13.78□□□□□ -0.2
PKP4-213ENST00000486254 ESPNB1AK53 854 aa13.78□□□□□ -0.2
PKP4-213ENST00000486254 BTBD18B2RXH4 712 aa13.78□□□□□ -0.2
PKP4-213ENST00000486254 TSPY3P0CV98 308 aa13.78□□□□□ -0.2
PKP4-213ENST00000486254 TSPY8P0CW00 308 aa13.78□□□□□ -0.2
PKP4-213ENST00000486254 GABPAQ06546 454 aa13.78□□□□□ -0.2
PKP4-213ENST00000486254 PFKFB3Q16875 520 aaPredicted RBP13.78□□□□□ -0.2
PKP4-213ENST00000486254 STRIP1Q5VSL9 837 aa13.78□□□□□ -0.2
PKP4-213ENST00000486254 GALNT17Q6IS24 598 aa13.78□□□□□ -0.2
PKP4-213ENST00000486254 ZSCAN30Q86W11 494 aa13.78□□□□□ -0.2
PKP4-213ENST00000486254 STK11IPQ8N1F8 1099 aa13.78□□□□□ -0.2
PKP4-213ENST00000486254 PNMA1Q8ND90 353 aa13.78□□□□□ -0.2
PKP4-213ENST00000486254 CCDC39Q9UFE4 941 aa13.78□□□□□ -0.2
PKP4-213ENST00000486254 SWAP70Q9UH65 585 aa13.78□□□□□ -0.2
PKP4-213ENST00000486254 USP25Q9UHP3 1055 aa13.78□□□□□ -0.2
PKP4-213ENST00000486254 PLEKHA8P1O95397 391 aa13.77□□□□□ -0.21
PKP4-213ENST00000486254 SCG2P13521 617 aa13.77□□□□□ -0.21
PKP4-213ENST00000486254 CALML3P27482 149 aa13.77□□□□□ -0.21
PKP4-213ENST00000486254 KRT2P35908 639 aa13.77□□□□□ -0.21
PKP4-213ENST00000486254 CDK8P49336 464 aa13.77□□□□□ -0.21
PKP4-213ENST00000486254 CAMK4Q16566 473 aa13.77□□□□□ -0.21
PKP4-213ENST00000486254 FAM47AQ5JRC9 791 aa13.77□□□□□ -0.21
PKP4-213ENST00000486254 PPP4R3BQ5MIZ7 849 aa13.77□□□□□ -0.21
PKP4-213ENST00000486254 RESP18Q5W5W9 173 aa13.77□□□□□ -0.21
PKP4-213ENST00000486254 MAPKAPK5Q8IW41 473 aa13.77□□□□□ -0.21
PKP4-213ENST00000486254 KRI1Q8N9T8 703 aaKnown RBP13.77□□□□□ -0.21
PKP4-213ENST00000486254 SUPT20HQ8NEM7 779 aa13.77□□□□□ -0.21
PKP4-213ENST00000486254 C7orf43Q8WVR3 580 aa13.77□□□□□ -0.21
PKP4-213ENST00000486254 TNFRSF25Q93038 417 aa13.77□□□□□ -0.21
PKP4-213ENST00000486254 EHD4Q9H223 541 aa13.77□□□□□ -0.21
PKP4-213ENST00000486254 ANO8Q9HCE9 1232 aaPredicted RBP13.77□□□□□ -0.21
PKP4-213ENST00000486254 ANO10Q9NW15 660 aa13.77□□□□□ -0.21
PKP4-213ENST00000486254 KIF13BQ9NQT8 1826 aa13.77□□□□□ -0.21
PKP4-213ENST00000486254 COL2A1P02458 1487 aaPredicted RBP13.76□□□□□ -0.21
PKP4-213ENST00000486254 PTPREP23469 700 aa13.76□□□□□ -0.21
PKP4-213ENST00000486254 CLCN1P35523 988 aa13.76□□□□□ -0.21
PKP4-213ENST00000486254 PLCD1P51178 756 aa13.76□□□□□ -0.21
PKP4-213ENST00000486254 NDUFA8P51970 172 aa13.76□□□□□ -0.21
PKP4-213ENST00000486254 EVX2Q03828 476 aa13.76□□□□□ -0.21
PKP4-213ENST00000486254 NPY5RQ15761 445 aa13.76□□□□□ -0.21
PKP4-213ENST00000486254 CKAP2LQ8IYA6 745 aa13.76□□□□□ -0.21
PKP4-213ENST00000486254 CERS5Q8N5B7 392 aa13.76□□□□□ -0.21
PKP4-213ENST00000486254 SRBD1Q8N5C6 995 aaKnown RBP13.76□□□□□ -0.21
PKP4-213ENST00000486254 TEKT1Q969V4 418 aa13.76□□□□□ -0.21
PKP4-213ENST00000486254 ZDHHC15Q96MV8 337 aa13.76□□□□□ -0.21
PKP4-213ENST00000486254 SPZ1Q9BXG8 430 aa13.76□□□□□ -0.21
PKP4-213ENST00000486254 UBE2Q2LH0YL09 131 aa13.75□□□□□ -0.21
PKP4-213ENST00000486254 NMT2O60551 498 aa13.75□□□□□ -0.21
PKP4-213ENST00000486254 PFKFB1P16118 471 aa13.75□□□□□ -0.21
PKP4-213ENST00000486254 TOB1P50616 345 aaPredicted RBP13.75□□□□□ -0.21
PKP4-213ENST00000486254 ANO6Q4KMQ2 910 aa13.75□□□□□ -0.21
PKP4-213ENST00000486254 DAGLBQ8NCG7 672 aa13.75□□□□□ -0.21
PKP4-213ENST00000486254 SLC16A10Q8TF71 515 aa13.75□□□□□ -0.21
PKP4-213ENST00000486254 DYNLL2Q96FJ2 89 aa13.75□□□□□ -0.21
PKP4-213ENST00000486254 BPIFA3Q9BQP9 254 aa13.75□□□□□ -0.21
PKP4-213ENST00000486254 NOL7Q9UMY1 257 aaKnown RBP13.75□□□□□ -0.21
PKP4-213ENST00000486254 KCNJ14Q9UNX9 436 aa13.75□□□□□ -0.21
PKP4-213ENST00000486254 V9GY48 417 aaPredicted RBP13.75□□□□□ -0.21
PKP4-213ENST00000486254 SCN9AQ15858 1988 aa13.75□□□□□ -0.21
PKP4-213ENST00000486254 PALM3A6NDB9 673 aaPredicted RBP13.75□□□□□ -0.21
PKP4-213ENST00000486254 hCG_1984214I3L0E3 225 aa13.75□□□□□ -0.21
PKP4-213ENST00000486254 WDHD1O75717 1129 aaPredicted RBP13.75□□□□□ -0.21
PKP4-213ENST00000486254 ZNF202O95125 648 aa13.75□□□□□ -0.21
PKP4-213ENST00000486254 TOP1P11387 765 aaKnown RBP13.75□□□□□ -0.21
PKP4-213ENST00000486254 ZNF165P49910 485 aa13.75□□□□□ -0.21
PKP4-213ENST00000486254 POTEAQ6S8J7 498 aa13.75□□□□□ -0.21
PKP4-213ENST00000486254 ZNF713Q8N859 430 aaPredicted RBP13.75□□□□□ -0.21
PKP4-213ENST00000486254 CCDC148Q8NFR7 591 aa13.75□□□□□ -0.21
PKP4-213ENST00000486254 SHISA4Q96DD7 197 aa13.75□□□□□ -0.21
PKP4-213ENST00000486254 NAT10Q9H0A0 1025 aaKnown RBP13.75□□□□□ -0.21
PKP4-213ENST00000486254 KIAA1468Q9P260 1216 aa13.75□□□□□ -0.21
PKP4-213ENST00000486254 TTF2Q9UNY4 1162 aaKnown RBP13.75□□□□□ -0.21
PKP4-213ENST00000486254 SRPRBQ9Y5M8 271 aaKnown RBP13.75□□□□□ -0.21
PKP4-213ENST00000486254 A0A1B0GVL5 298 aa13.74□□□□□ -0.21
PKP4-213ENST00000486254 TRIM75PA6NK02 468 aa13.74□□□□□ -0.21
PKP4-213ENST00000486254 SYKP43405 635 aa13.74□□□□□ -0.21
PKP4-213ENST00000486254 KIAA2012Q0VF49 1180 aa13.74□□□□□ -0.21
PKP4-213ENST00000486254 SHC4Q6S5L8 630 aa13.74□□□□□ -0.21
PKP4-213ENST00000486254 SARM1Q6SZW1 724 aa13.74□□□□□ -0.21
PKP4-213ENST00000486254 CEP57L1Q8IYX8 460 aa13.74□□□□□ -0.21
PKP4-213ENST00000486254 ZNF622Q969S3 477 aaKnown RBP eCLIP13.74□□□□□ -0.21
PKP4-213ENST00000486254 FERMT2Q96AC1 680 aa13.74□□□□□ -0.21
PKP4-213ENST00000486254 TMEM47Q9BQJ4 181 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms