RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 BICC1Q9H694 974 aaKnown RBP12.11□□□□□ -0.47
PTPN7-213ENST00000486116 PHF24Q9UPV7 400 aa12.11□□□□□ -0.47
PTPN7-213ENST00000486116 ERC2O15083 957 aa12.1□□□□□ -0.47
PTPN7-213ENST00000486116 SHROOM1Q2M3G4 852 aaPredicted RBP12.1□□□□□ -0.47
PTPN7-213ENST00000486116 FAM47AQ5JRC9 791 aa12.1□□□□□ -0.47
PTPN7-213ENST00000486116 TMEM240Q5SV17 173 aa12.1□□□□□ -0.47
PTPN7-213ENST00000486116 WDR78Q5VTH9 848 aa12.1□□□□□ -0.47
PTPN7-213ENST00000486116 LPIN2Q92539 896 aa12.1□□□□□ -0.47
PTPN7-213ENST00000486116 NKX2-4Q9H2Z4 354 aa12.1□□□□□ -0.47
PTPN7-213ENST00000486116 TMEM39AQ9NV64 488 aa12.1□□□□□ -0.47
PTPN7-213ENST00000486116 RABGAP1Q9Y3P9 1069 aa12.1□□□□□ -0.47
PTPN7-213ENST00000486116 MROH7-TTC4A0A0A0MT08 1334 aa12.1□□□□□ -0.47
PTPN7-213ENST00000486116 WDFY4Q6ZS81 3184 aa12.1□□□□□ -0.47
PTPN7-213ENST00000486116 C19orf81C9J6K1 198 aa12.09□□□□□ -0.47
PTPN7-213ENST00000486116 SMIM22K7EJ46 135 aa12.09□□□□□ -0.47
PTPN7-213ENST00000486116 TLL1O43897 1013 aa12.09□□□□□ -0.47
PTPN7-213ENST00000486116 NPM3O75607 178 aaKnown RBP12.09□□□□□ -0.47
PTPN7-213ENST00000486116 ALDH1L1O75891 902 aa12.09□□□□□ -0.47
PTPN7-213ENST00000486116 NHLH1Q02575 133 aa12.09□□□□□ -0.47
PTPN7-213ENST00000486116 FAAP100Q0VG06 881 aa12.09□□□□□ -0.47
PTPN7-213ENST00000486116 SLC44A5Q8NCS7 719 aa12.09□□□□□ -0.47
PTPN7-213ENST00000486116 FAM163AQ96GL9 167 aaPredicted RBP12.09□□□□□ -0.47
PTPN7-213ENST00000486116 EMILIN3Q9NT22 766 aa12.09□□□□□ -0.47
PTPN7-213ENST00000486116 YBX2Q9Y2T7 364 aaKnown RBP12.09□□□□□ -0.47
PTPN7-213ENST00000486116 USP17L10C9JJH3 530 aa12.08□□□□□ -0.48
PTPN7-213ENST00000486116 CCNA1P78396 465 aa12.08□□□□□ -0.48
PTPN7-213ENST00000486116 RAB30Q15771 203 aa12.08□□□□□ -0.48
PTPN7-213ENST00000486116 NCBP3Q53F19 620 aaKnown RBP12.08□□□□□ -0.48
PTPN7-213ENST00000486116 PRAMEF19Q5SWL8 479 aa12.08□□□□□ -0.48
PTPN7-213ENST00000486116 OLFML2BQ68BL8 750 aa12.08□□□□□ -0.48
PTPN7-213ENST00000486116 DZIP1Q86YF9 867 aaKnown RBP12.08□□□□□ -0.48
PTPN7-213ENST00000486116 ZNF384Q8TF68 577 aa12.08□□□□□ -0.48
PTPN7-213ENST00000486116 BTBD7Q9P203 1132 aa12.08□□□□□ -0.48
PTPN7-213ENST00000486116 BRWD1Q9NSI6 2320 aa12.08□□□□□ -0.48
PTPN7-213ENST00000486116 COL4A4P53420 1690 aaPredicted RBP12.07□□□□□ -0.48
PTPN7-213ENST00000486116 GPR75-ASB3A0A0A6YYF3 556 aa12.07□□□□□ -0.48
PTPN7-213ENST00000486116 A0A1W2PQ45 241 aaPredicted RBP12.07□□□□□ -0.48
PTPN7-213ENST00000486116 A0A1W2PQY0 241 aa12.07□□□□□ -0.48
PTPN7-213ENST00000486116 PI4K2BG5E9Z4 385 aa12.07□□□□□ -0.48
PTPN7-213ENST00000486116 TIMP1P01033 207 aa12.07□□□□□ -0.48
PTPN7-213ENST00000486116 ASNSP08243 561 aa12.07□□□□□ -0.48
PTPN7-213ENST00000486116 PHKA1P46020 1223 aa12.07□□□□□ -0.48
PTPN7-213ENST00000486116 MFSD5Q6N075 450 aa12.07□□□□□ -0.48
PTPN7-213ENST00000486116 ANKRD33Q7Z3H0 272 aa12.07□□□□□ -0.48
PTPN7-213ENST00000486116 DNAJC18Q9H819 358 aa12.07□□□□□ -0.48
PTPN7-213ENST00000486116 CD320Q9NPF0 282 aa12.07□□□□□ -0.48
PTPN7-213ENST00000486116 HERC5Q9UII4 1024 aaKnown RBP12.07□□□□□ -0.48
PTPN7-213ENST00000486116 MSRAQ9UJ68 235 aa12.07□□□□□ -0.48
PTPN7-213ENST00000486116 TBX21Q9UL17 535 aa12.07□□□□□ -0.48
PTPN7-213ENST00000486116 DENND2AQ9ULE3 1009 aa12.07□□□□□ -0.48
PTPN7-213ENST00000486116 IVNS1ABPQ9Y6Y0 642 aa12.07□□□□□ -0.48
PTPN7-213ENST00000486116 ZNF318Q5VUA4 2279 aa12.07□□□□□ -0.48
PTPN7-213ENST00000486116 PARP14Q460N5 1801 aa12.07□□□□□ -0.48
PTPN7-213ENST00000486116 PRR33A8MZF0 331 aa12.06□□□□□ -0.48
PTPN7-213ENST00000486116 SEMA3EO15041 775 aa12.06□□□□□ -0.48
PTPN7-213ENST00000486116 VAMP4O75379 141 aa12.06□□□□□ -0.48
PTPN7-213ENST00000486116 PPIGQ13427 754 aaKnown RBP eCLIP12.06□□□□□ -0.48
PTPN7-213ENST00000486116 SKIV2LQ15477 1246 aaKnown RBP12.06□□□□□ -0.48
PTPN7-213ENST00000486116 ZNF365Q70YC5 407 aa12.06□□□□□ -0.48
PTPN7-213ENST00000486116 HERVK_113Q902F9 699 aa12.06□□□□□ -0.48
PTPN7-213ENST00000486116 SRCIN1Q9C0H9 1055 aa12.06□□□□□ -0.48
PTPN7-213ENST00000486116 SLC28A3Q9HAS3 691 aa12.06□□□□□ -0.48
PTPN7-213ENST00000486116 USP34Q70CQ2 3546 aa12.05□□□□□ -0.48
PTPN7-213ENST00000486116 EYA2O00167 538 aa12.05□□□□□ -0.48
PTPN7-213ENST00000486116 GDF11O95390 407 aa12.05□□□□□ -0.48
PTPN7-213ENST00000486116 ACRP10323 421 aa12.05□□□□□ -0.48
PTPN7-213ENST00000486116 CSF2RAP15509 400 aa12.05□□□□□ -0.48
PTPN7-213ENST00000486116 ADORA2AP29274 412 aa12.05□□□□□ -0.48
PTPN7-213ENST00000486116 SLC4A10Q6U841 1118 aa12.05□□□□□ -0.48
PTPN7-213ENST00000486116 ATG9AQ7Z3C6 839 aa12.05□□□□□ -0.48
PTPN7-213ENST00000486116 DPP9Q86TI2 863 aa12.05□□□□□ -0.48
PTPN7-213ENST00000486116 SLF2Q8IX21 1173 aa12.05□□□□□ -0.48
PTPN7-213ENST00000486116 ZGPATQ8N5A5 531 aaKnown RBP12.05□□□□□ -0.48
PTPN7-213ENST00000486116 TOX2Q96NM4 488 aa12.05□□□□□ -0.48
PTPN7-213ENST00000486116 XPNPEP3Q9NQH7 507 aa12.05□□□□□ -0.48
PTPN7-213ENST00000486116 GNL3LQ9NVN8 582 aaKnown RBP12.05□□□□□ -0.48
PTPN7-213ENST00000486116 ABCF2Q9UG63 623 aa12.05□□□□□ -0.48
PTPN7-213ENST00000486116 ZBTB21Q9ULJ3 1066 aa12.05□□□□□ -0.48
PTPN7-213ENST00000486116 COL11A1P12107 1806 aaPredicted RBP12.04□□□□□ -0.48
PTPN7-213ENST00000486116 MYH1P12882 1939 aa12.04□□□□□ -0.48
PTPN7-213ENST00000486116 DCDC2CA8MYV0 355 aa12.04□□□□□ -0.48
PTPN7-213ENST00000486116 ZBTB22O15209 634 aa12.04□□□□□ -0.48
PTPN7-213ENST00000486116 COBLO75128 1261 aa12.04□□□□□ -0.48
PTPN7-213ENST00000486116 PGK1P00558 417 aa12.04□□□□□ -0.48
PTPN7-213ENST00000486116 RFX5P48382 616 aaPredicted RBP12.04□□□□□ -0.48
PTPN7-213ENST00000486116 MECOMQ03112 1051 aa12.04□□□□□ -0.48
PTPN7-213ENST00000486116 ATP2B3Q16720 1220 aa12.04□□□□□ -0.48
PTPN7-213ENST00000486116 PSRC1Q6PGN9 363 aaPredicted RBP12.04□□□□□ -0.48
PTPN7-213ENST00000486116 CCDC174Q6PII3 467 aa12.04□□□□□ -0.48
PTPN7-213ENST00000486116 USP17L2Q6R6M4 530 aa12.04□□□□□ -0.48
PTPN7-213ENST00000486116 LBX2Q6XYB7 198 aa12.04□□□□□ -0.48
PTPN7-213ENST00000486116 C12orf42Q96LP6 360 aa12.04□□□□□ -0.48
PTPN7-213ENST00000486116 MTCH2Q9Y6C9 303 aa12.04□□□□□ -0.48
PTPN7-213ENST00000486116 FANCIQ9NVI1 1328 aa12.04□□□□□ -0.48
PTPN7-213ENST00000486116 USP17L15C9J2P7 530 aa12.03□□□□□ -0.48
PTPN7-213ENST00000486116 USP17L13C9JLJ4 530 aa12.03□□□□□ -0.48
PTPN7-213ENST00000486116 USP17L11C9JVI0 530 aa12.03□□□□□ -0.48
PTPN7-213ENST00000486116 USP17L18D6R9N7 530 aa12.03□□□□□ -0.48
PTPN7-213ENST00000486116 USP17L22D6RA61 530 aa12.03□□□□□ -0.48
PTPN7-213ENST00000486116 USP17L17D6RBQ6 530 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms