RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 IRX3P78415 501 aaPredicted RBP22.06■■□□□ 1.12
COL1A1-206ENST00000485870 GIMAP6Q6P9H5 292 aa22.06■■□□□ 1.12
COL1A1-206ENST00000485870 ANKRD13CQ8N6S4 541 aa22.06■■□□□ 1.12
COL1A1-206ENST00000485870 EPB41L4AQ9HCS5 686 aaPredicted RBP22.06■■□□□ 1.12
COL1A1-206ENST00000485870 EMILIN3Q9NT22 766 aa22.06■■□□□ 1.12
COL1A1-206ENST00000485870 TAOK2Q9UL54 1235 aa22.06■■□□□ 1.12
COL1A1-206ENST00000485870 MINDY4BA8MYZ0 360 aa22.05■■□□□ 1.12
COL1A1-206ENST00000485870 AKR1B1P15121 316 aa22.05■■□□□ 1.12
COL1A1-206ENST00000485870 TMEM179Q6ZVK1 233 aa22.05■■□□□ 1.12
COL1A1-206ENST00000485870 STK11IPQ8N1F8 1099 aa22.05■■□□□ 1.12
COL1A1-206ENST00000485870 MGAMO43451 1857 aa22.05■■□□□ 1.12
COL1A1-206ENST00000485870 CENPFP49454 3210 aa22.04■■□□□ 1.12
COL1A1-206ENST00000485870 TRIM6-TRIM34B2RNG4 842 aa22.04■■□□□ 1.12
COL1A1-206ENST00000485870 GNRH1P01148 92 aa22.04■■□□□ 1.12
COL1A1-206ENST00000485870 HOXA7P31268 230 aaPredicted RBP22.04■■□□□ 1.12
COL1A1-206ENST00000485870 USP14P54578 494 aa22.04■■□□□ 1.12
COL1A1-206ENST00000485870 FCGRTP55899 365 aa22.04■■□□□ 1.12
COL1A1-206ENST00000485870 SBK1Q52WX2 424 aa22.04■■□□□ 1.12
COL1A1-206ENST00000485870 CCDC129Q6ZRS4 1044 aa22.04■■□□□ 1.12
COL1A1-206ENST00000485870 PLEKHM2Q8IWE5 1019 aa22.04■■□□□ 1.12
COL1A1-206ENST00000485870 KIAA1683Q9H0B3 1180 aa22.04■■□□□ 1.12
COL1A1-206ENST00000485870 PATL2C9JE40 543 aaKnown RBP22.03■■□□□ 1.12
COL1A1-206ENST00000485870 GCLCP48506 637 aaPredicted RBP22.03■■□□□ 1.12
COL1A1-206ENST00000485870 CLEC10AQ8IUN9 316 aa22.03■■□□□ 1.12
COL1A1-206ENST00000485870 C12orf42Q96LP6 360 aa22.03■■□□□ 1.12
COL1A1-206ENST00000485870 CCDC17Q96LX7 622 aa22.03■■□□□ 1.12
COL1A1-206ENST00000485870 HOXD10P28358 340 aa22.02■■□□□ 1.12
COL1A1-206ENST00000485870 FAM110CQ1W6H9 321 aa22.02■■□□□ 1.12
COL1A1-206ENST00000485870 IFNL3Q8IZI9 196 aa22.02■■□□□ 1.12
COL1A1-206ENST00000485870 RILPL2Q969X0 211 aa22.02■■□□□ 1.12
COL1A1-206ENST00000485870 P2RX7Q99572 595 aaKnown RBP22.02■■□□□ 1.12
COL1A1-206ENST00000485870 NACAP1Q9BZK3 213 aa22.02■■□□□ 1.12
COL1A1-206ENST00000485870 SRRDQ9UH36 339 aa22.02■■□□□ 1.12
COL1A1-206ENST00000485870 A0A1W2PRG0 241 aa22.01■■□□□ 1.11
COL1A1-206ENST00000485870 VCAM1P19320 739 aa22.01■■□□□ 1.11
COL1A1-206ENST00000485870 PRMT2P55345 433 aa22.01■■□□□ 1.11
COL1A1-206ENST00000485870 HERVK_113P62684 666 aa22.01■■□□□ 1.11
COL1A1-206ENST00000485870 ICA1Q05084 483 aa22.01■■□□□ 1.11
COL1A1-206ENST00000485870 SLC9C1Q4G0N8 1177 aa22.01■■□□□ 1.11
COL1A1-206ENST00000485870 MYPNQ86TC9 1320 aa22.01■■□□□ 1.11
COL1A1-206ENST00000485870 ROBO3Q96MS0 1386 aa22■■□□□ 1.11
COL1A1-206ENST00000485870 FAM227BQ96M60 508 aa22■■□□□ 1.11
COL1A1-206ENST00000485870 NAPBQ9H115 298 aa22■■□□□ 1.11
COL1A1-206ENST00000485870 OSBPL3Q9H4L5 887 aa22■■□□□ 1.11
COL1A1-206ENST00000485870 MKNK2Q9HBH9 465 aa22■■□□□ 1.11
COL1A1-206ENST00000485870 USP17L15C9J2P7 530 aa21.99■■□□□ 1.11
COL1A1-206ENST00000485870 USP17L13C9JLJ4 530 aa21.99■■□□□ 1.11
COL1A1-206ENST00000485870 USP17L11C9JVI0 530 aa21.99■■□□□ 1.11
COL1A1-206ENST00000485870 USP17L18D6R9N7 530 aa21.99■■□□□ 1.11
COL1A1-206ENST00000485870 USP17L22D6RA61 530 aa21.99■■□□□ 1.11
COL1A1-206ENST00000485870 USP17L17D6RBQ6 530 aa21.99■■□□□ 1.11
COL1A1-206ENST00000485870 USP17L19D6RCP7 530 aa21.99■■□□□ 1.11
COL1A1-206ENST00000485870 USP17L20D6RJB6 530 aa21.99■■□□□ 1.11
COL1A1-206ENST00000485870 TNPO2O14787 897 aaKnown RBP21.99■■□□□ 1.11
COL1A1-206ENST00000485870 PEX10O60683 326 aa21.99■■□□□ 1.11
COL1A1-206ENST00000485870 PRKCZQ05513 592 aa21.99■■□□□ 1.11
COL1A1-206ENST00000485870 USP17L24Q0WX57 530 aa21.99■■□□□ 1.11
COL1A1-206ENST00000485870 RAET1EQ8TD07 263 aa21.99■■□□□ 1.11
COL1A1-206ENST00000485870 SH3TC2Q8TF17 1288 aa21.99■■□□□ 1.11
COL1A1-206ENST00000485870 ARMC5Q96C12 935 aa21.99■■□□□ 1.11
COL1A1-206ENST00000485870 ARHGEF10LQ9HCE6 1279 aa21.99■■□□□ 1.11
COL1A1-206ENST00000485870 DOCK3Q8IZD9 2030 aa21.98■■□□□ 1.11
COL1A1-206ENST00000485870 A0A0D9SFI3 127 aa21.98■■□□□ 1.11
COL1A1-206ENST00000485870 RASA1P20936 1047 aa21.98■■□□□ 1.11
COL1A1-206ENST00000485870 RGS19P49795 217 aa21.98■■□□□ 1.11
COL1A1-206ENST00000485870 ATP2B2Q01814 1243 aa21.98■■□□□ 1.11
COL1A1-206ENST00000485870 SIAH1Q8IUQ4 282 aa21.98■■□□□ 1.11
COL1A1-206ENST00000485870 RPAP3Q9H6T3 665 aaPredicted RBP21.98■■□□□ 1.11
COL1A1-206ENST00000485870 TXNRD2Q9NNW7 524 aa21.98■■□□□ 1.11
COL1A1-206ENST00000485870 HELLSQ9NRZ9 838 aa21.98■■□□□ 1.11
COL1A1-206ENST00000485870 GABRQQ9UN88 632 aa21.98■■□□□ 1.11
COL1A1-206ENST00000485870 KIAA0100Q14667 2235 aaKnown RBP21.98■■□□□ 1.11
COL1A1-206ENST00000485870 FOXP2O15409 715 aa21.97■■□□□ 1.11
COL1A1-206ENST00000485870 PRDM1O75626 825 aa21.97■■□□□ 1.11
COL1A1-206ENST00000485870 NMIQ13287 307 aaPredicted RBP21.97■■□□□ 1.11
COL1A1-206ENST00000485870 VPS53Q5VIR6 699 aa21.97■■□□□ 1.11
COL1A1-206ENST00000485870 CATSPERGQ6ZRH7 1159 aa21.97■■□□□ 1.11
COL1A1-206ENST00000485870 NBPF11Q86T75 865 aa21.97■■□□□ 1.11
COL1A1-206ENST00000485870 PAGR1Q9BTK6 254 aa21.97■■□□□ 1.11
COL1A1-206ENST00000485870 MORF4L1Q9UBU8 362 aa21.97■■□□□ 1.11
COL1A1-206ENST00000485870 MYCP01106 439 aaPredicted RBP21.96■■□□□ 1.11
COL1A1-206ENST00000485870 PDE4AP27815 886 aa21.96■■□□□ 1.11
COL1A1-206ENST00000485870 MCMDC2Q4G0Z9 681 aa21.96■■□□□ 1.11
COL1A1-206ENST00000485870 COA7Q96BR5 231 aa21.96■■□□□ 1.11
COL1A1-206ENST00000485870 ZNF333Q96JL9 665 aa21.96■■□□□ 1.11
COL1A1-206ENST00000485870 SH2D4AQ9H788 454 aa21.96■■□□□ 1.11
COL1A1-206ENST00000485870 KANSL2Q9H9L4 492 aa21.96■■□□□ 1.11
COL1A1-206ENST00000485870 TMX2Q9Y320 296 aa21.96■■□□□ 1.11
COL1A1-206ENST00000485870 EEF2P13639 858 aaKnown RBP21.95■■□□□ 1.1
COL1A1-206ENST00000485870 PPARAQ07869 468 aa21.95■■□□□ 1.1
COL1A1-206ENST00000485870 KIAA1755Q5JYT7 1200 aa21.95■■□□□ 1.1
COL1A1-206ENST00000485870 TICAM2Q86XR7 235 aa21.95■■□□□ 1.1
COL1A1-206ENST00000485870 SPICE1Q8N0Z3 855 aa21.95■■□□□ 1.1
COL1A1-206ENST00000485870 GPRC5AQ8NFJ5 357 aa21.95■■□□□ 1.1
COL1A1-206ENST00000485870 GTF3C2Q8WUA4 911 aaPredicted RBP21.95■■□□□ 1.1
COL1A1-206ENST00000485870 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.95■■□□□ 1.1
COL1A1-206ENST00000485870 ZNF287Q9HBT7 754 aa21.95■■□□□ 1.1
COL1A1-206ENST00000485870 RBPJLQ9UBG7 517 aa21.95■■□□□ 1.1
COL1A1-206ENST00000485870 GREB1LQ9C091 1923 aaPredicted RBP21.94■■□□□ 1.1
COL1A1-206ENST00000485870 SDSP20132 328 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms