RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 HLFQ16534 295 aa8.87□□□□□ -0.99
SMC4-217ENST00000485867 C2orf69Q8N8R5 385 aa8.87□□□□□ -0.99
SMC4-217ENST00000485867 RPGRQ92834 1020 aaKnown RBP8.87□□□□□ -0.99
SMC4-217ENST00000485867 HSH2DQ96JZ2 352 aa8.87□□□□□ -0.99
SMC4-217ENST00000485867 POLR3GLQ9BT43 218 aa8.87□□□□□ -0.99
SMC4-217ENST00000485867 BCL2L13Q9BXK5 485 aa8.87□□□□□ -0.99
SMC4-217ENST00000485867 VPS33BQ9H267 617 aa8.87□□□□□ -0.99
SMC4-217ENST00000485867 TFIP11Q9UBB9 837 aaKnown RBP8.87□□□□□ -0.99
SMC4-217ENST00000485867 CHMP3Q9Y3E7 222 aa8.87□□□□□ -0.99
SMC4-217ENST00000485867 MAFBQ9Y5Q3 323 aaPredicted RBP8.87□□□□□ -0.99
SMC4-217ENST00000485867 CEMIPQ8WUJ3 1361 aa8.86□□□□□ -0.99
SMC4-217ENST00000485867 TCERG1O14776 1098 aaKnown RBP8.86□□□□□ -0.99
SMC4-217ENST00000485867 FBXO46Q6PJ61 603 aaPredicted RBP8.86□□□□□ -0.99
SMC4-217ENST00000485867 KRT26Q7Z3Y9 468 aa8.86□□□□□ -0.99
SMC4-217ENST00000485867 ZNF280CQ8ND82 737 aa8.86□□□□□ -0.99
SMC4-217ENST00000485867 TNFRSF25Q93038 417 aa8.86□□□□□ -0.99
SMC4-217ENST00000485867 CRAMP1Q96RY5 1269 aa8.86□□□□□ -0.99
SMC4-217ENST00000485867 NYXQ9GZU5 481 aa8.86□□□□□ -0.99
SMC4-217ENST00000485867 PANK3Q9H999 370 aa8.86□□□□□ -0.99
SMC4-217ENST00000485867 CNOT7Q9UIV1 285 aaKnown RBP8.86□□□□□ -0.99
SMC4-217ENST00000485867 HDAC9Q9UKV0 1011 aa8.86□□□□□ -0.99
SMC4-217ENST00000485867 IBTKQ9P2D0 1353 aaPredicted RBP8.86□□□□□ -0.99
SMC4-217ENST00000485867 GNAT3A8MTJ3 354 aa8.85□□□□□ -0.99
SMC4-217ENST00000485867 ADM5C9JUS6 153 aa8.85□□□□□ -0.99
SMC4-217ENST00000485867 K7ELQ4 463 aaPredicted RBP8.85□□□□□ -0.99
SMC4-217ENST00000485867 PPP1R12BO60237 982 aaPredicted RBP8.85□□□□□ -0.99
SMC4-217ENST00000485867 RAD17O75943 681 aa8.85□□□□□ -0.99
SMC4-217ENST00000485867 ALAS2P22557 587 aa8.85□□□□□ -0.99
SMC4-217ENST00000485867 TYRO3Q06418 890 aa8.85□□□□□ -0.99
SMC4-217ENST00000485867 SPEM2Q0P670 501 aa8.85□□□□□ -0.99
SMC4-217ENST00000485867 TNIP1Q15025 636 aa8.85□□□□□ -0.99
SMC4-217ENST00000485867 TMEM132AQ24JP5 1023 aa8.85□□□□□ -0.99
SMC4-217ENST00000485867 RASAL3Q86YV0 1011 aa8.85□□□□□ -0.99
SMC4-217ENST00000485867 STAG2Q8N3U4 1231 aa8.85□□□□□ -0.99
SMC4-217ENST00000485867 ZNF296Q8WUU4 475 aaPredicted RBP8.85□□□□□ -0.99
SMC4-217ENST00000485867 RBM17Q96I25 401 aaKnown RBP8.85□□□□□ -0.99
SMC4-217ENST00000485867 SUSD3Q96L08 255 aa8.85□□□□□ -0.99
SMC4-217ENST00000485867 PLVAPQ9BX97 442 aa8.85□□□□□ -0.99
SMC4-217ENST00000485867 RTFDC1Q9BY42 306 aaPredicted RBP8.85□□□□□ -0.99
SMC4-217ENST00000485867 BRD7Q9NPI1 651 aa8.85□□□□□ -0.99
SMC4-217ENST00000485867 ANKIB1Q9P2G1 1089 aa8.85□□□□□ -0.99
SMC4-217ENST00000485867 ANKRD36CQ5JPF3 1778 aa8.85□□□□□ -0.99
SMC4-217ENST00000485867 DUOX1Q9NRD9 1551 aa8.85□□□□□ -0.99
SMC4-217ENST00000485867 TAF1P21675 1872 aa8.85□□□□□ -0.99
SMC4-217ENST00000485867 LRRC37AA6NMS7 1700 aa8.84□□□□□ -0.99
SMC4-217ENST00000485867 BTBD11A6QL63 1104 aa8.84□□□□□ -0.99
SMC4-217ENST00000485867 YDJCA8MPS7 323 aa8.84□□□□□ -0.99
SMC4-217ENST00000485867 H7C1D1 291 aa8.84□□□□□ -0.99
SMC4-217ENST00000485867 RASA1P20936 1047 aa8.84□□□□□ -0.99
SMC4-217ENST00000485867 KIAA2012Q0VF49 1180 aa8.84□□□□□ -0.99
SMC4-217ENST00000485867 DDX60Q8IY21 1712 aaKnown RBP8.84□□□□□ -0.99
SMC4-217ENST00000485867 SUPT20HQ8NEM7 779 aa8.84□□□□□ -0.99
SMC4-217ENST00000485867 CEP63Q96MT8 703 aa8.84□□□□□ -0.99
SMC4-217ENST00000485867 C2orf49Q9BVC5 232 aaPredicted RBP8.84□□□□□ -0.99
SMC4-217ENST00000485867 ATP6V0A2Q9Y487 856 aa8.84□□□□□ -0.99
SMC4-217ENST00000485867 UBN2Q6ZU65 1347 aa8.83□□□□□ -1
SMC4-217ENST00000485867 TBC1D8O95759 1140 aa8.83□□□□□ -1
SMC4-217ENST00000485867 EGFRP00533 1210 aa8.83□□□□□ -1
SMC4-217ENST00000485867 SNRPA1P09661 255 aaKnown RBP8.83□□□□□ -1
SMC4-217ENST00000485867 SEC13P55735 322 aa8.83□□□□□ -1
SMC4-217ENST00000485867 TBC1D10BQ4KMP7 808 aaPredicted RBP8.83□□□□□ -1
SMC4-217ENST00000485867 ALDH16A1Q8IZ83 802 aa8.83□□□□□ -1
SMC4-217ENST00000485867 GAS2L2Q8NHY3 880 aa8.83□□□□□ -1
SMC4-217ENST00000485867 STARD13Q9Y3M8 1113 aa8.83□□□□□ -1
SMC4-217ENST00000485867 RBM19Q9Y4C8 960 aaKnown RBP8.83□□□□□ -1
SMC4-217ENST00000485867 HTTP42858 3142 aa8.83□□□□□ -1
SMC4-217ENST00000485867 SCN9AQ15858 1988 aa8.82□□□□□ -1
SMC4-217ENST00000485867 SZT2Q5T011 3432 aa8.82□□□□□ -1
SMC4-217ENST00000485867 DLL1O00548 723 aa8.82□□□□□ -1
SMC4-217ENST00000485867 FURINP09958 794 aa8.82□□□□□ -1
SMC4-217ENST00000485867 COL9A3Q14050 684 aaPredicted RBP8.82□□□□□ -1
SMC4-217ENST00000485867 NOM1Q5C9Z4 860 aaKnown RBP8.82□□□□□ -1
SMC4-217ENST00000485867 RAB44Q7Z6P3 723 aaPredicted RBP8.82□□□□□ -1
SMC4-217ENST00000485867 DPF2Q92785 391 aa8.82□□□□□ -1
SMC4-217ENST00000485867 TMX4Q9H1E5 349 aaPredicted RBP8.82□□□□□ -1
SMC4-217ENST00000485867 COL3A1P02461 1466 aaPredicted RBP8.82□□□□□ -1
SMC4-217ENST00000485867 ABCC4O15439 1325 aa8.81□□□□□ -1
SMC4-217ENST00000485867 ERVV-1B6SEH8 477 aa8.81□□□□□ -1
SMC4-217ENST00000485867 DIAPH1O60610 1272 aaKnown RBP8.81□□□□□ -1
SMC4-217ENST00000485867 NTSR2O95665 410 aa8.81□□□□□ -1
SMC4-217ENST00000485867 SPATA31C1P0DKV0 1188 aa8.81□□□□□ -1
SMC4-217ENST00000485867 GPTP24298 496 aa8.81□□□□□ -1
SMC4-217ENST00000485867 SUSD4Q5VX71 490 aa8.81□□□□□ -1
SMC4-217ENST00000485867 DPP8Q6V1X1 898 aaPredicted RBP8.81□□□□□ -1
SMC4-217ENST00000485867 SCG3Q8WXD2 468 aaKnown RBP8.81□□□□□ -1
SMC4-217ENST00000485867 DCPSQ96C86 337 aaKnown RBP8.81□□□□□ -1
SMC4-217ENST00000485867 CDCA5Q96FF9 252 aa8.81□□□□□ -1
SMC4-217ENST00000485867 PRDM6Q9NQX0 595 aa8.81□□□□□ -1
SMC4-217ENST00000485867 KCNH4Q9UQ05 1017 aa8.81□□□□□ -1
SMC4-217ENST00000485867 MAP3K15Q6ZN16 1313 aa8.8□□□□□ -1
SMC4-217ENST00000485867 PSME4Q14997 1843 aa8.8□□□□□ -1
SMC4-217ENST00000485867 M0R082 166 aa8.8□□□□□ -1
SMC4-217ENST00000485867 PSMD14O00487 310 aa8.8□□□□□ -1
SMC4-217ENST00000485867 ADH7P40394 386 aa8.8□□□□□ -1
SMC4-217ENST00000485867 PTK7Q13308 1070 aa8.8□□□□□ -1
SMC4-217ENST00000485867 CRTC2Q53ET0 693 aaPredicted RBP8.8□□□□□ -1
SMC4-217ENST00000485867 ZNF417Q8TAU3 575 aa8.8□□□□□ -1
SMC4-217ENST00000485867 ZNF587Q96SQ5 575 aaPredicted RBP8.8□□□□□ -1
SMC4-217ENST00000485867 PPP1R12CQ9BZL4 782 aa8.8□□□□□ -1
SMC4-217ENST00000485867 GGA3Q9NZ52 723 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms