RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 FAM87AP0C7U9 286 aa5.12□□□□□ -1.59
PRPF38B-205ENST00000485810 HSPA5P11021 654 aaKnown RBP5.12□□□□□ -1.59
PRPF38B-205ENST00000485810 LIG1P18858 919 aa5.12□□□□□ -1.59
PRPF38B-205ENST00000485810 FCGRTP55899 365 aa5.12□□□□□ -1.59
PRPF38B-205ENST00000485810 FAM193AP78312 1265 aa5.12□□□□□ -1.59
PRPF38B-205ENST00000485810 IGBP1P78318 339 aa5.12□□□□□ -1.59
PRPF38B-205ENST00000485810 FTSJ3Q8IY81 847 aaKnown RBP5.12□□□□□ -1.59
PRPF38B-205ENST00000485810 NME8Q8N427 588 aa5.12□□□□□ -1.59
PRPF38B-205ENST00000485810 NETO1Q8TDF5 533 aa5.12□□□□□ -1.59
PRPF38B-205ENST00000485810 FAM168AQ92567 244 aa5.12□□□□□ -1.59
PRPF38B-205ENST00000485810 DMRTB1Q96MA1 342 aa5.12□□□□□ -1.59
PRPF38B-205ENST00000485810 SETDB2Q96T68 719 aa5.12□□□□□ -1.59
PRPF38B-205ENST00000485810 CORO1BQ9BR76 489 aa5.12□□□□□ -1.59
PRPF38B-205ENST00000485810 DNAJC25Q9H1X3 360 aa5.12□□□□□ -1.59
PRPF38B-205ENST00000485810 CCDC86Q9H6F5 360 aaKnown RBP5.12□□□□□ -1.59
PRPF38B-205ENST00000485810 DISC1Q9NRI5 854 aa5.12□□□□□ -1.59
PRPF38B-205ENST00000485810 DCTN4Q9UJW0 460 aa5.12□□□□□ -1.59
PRPF38B-205ENST00000485810 TMA7Q9Y2S6 64 aaKnown RBP5.12□□□□□ -1.59
PRPF38B-205ENST00000485810 PCDHGC5Q9Y5F6 944 aa5.12□□□□□ -1.59
PRPF38B-205ENST00000485810 PZPP20742 1482 aa5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 SHANK2Q9UPX8 1470 aa5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 POLR1AO95602 1720 aaPredicted RBP5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 NUP160Q12769 1436 aa5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 UHRF1BP1Q6BDS2 1440 aa5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 ITSN2Q9NZM3 1697 aa5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 CREB3O43889 395 aa5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 FARP2O94887 1054 aaPredicted RBP5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 OXCT1P55809 520 aa5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 PLCB3Q01970 1234 aa5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 CYP27C1Q4G0S4 372 aa5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 NAALADL2Q58DX5 795 aa5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 HSP90AB2PQ58FF8 381 aa5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 ZNF662Q6ZS27 426 aa5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 NOP9Q86U38 636 aaKnown RBP5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 ALKBH8Q96BT7 664 aaKnown RBP5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 MISP3Q96FF7 219 aa5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 FANCD2OSQ96PS1 177 aa5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 PRKRIP1Q9H875 184 aaPredicted RBP5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 RC3H2Q9HBD1 1191 aaKnown RBP5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 RRP7BPQ9NSQ0 103 aa5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 KDM5DQ9BY66 1539 aa5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 GPATCH8Q9UKJ3 1502 aaKnown RBP5.11□□□□□ -1.59
PRPF38B-205ENST00000485810 ZBED9Q6R2W3 1325 aa5.1□□□□□ -1.59
PRPF38B-205ENST00000485810 KIAA1107Q9UPP5 1409 aa5.1□□□□□ -1.59
PRPF38B-205ENST00000485810 PNMA6FA0A0J9YX94 578 aa5.1□□□□□ -1.59
PRPF38B-205ENST00000485810 MAP4K4O95819 1239 aaPredicted RBP5.1□□□□□ -1.59
PRPF38B-205ENST00000485810 IBSPP21815 317 aaPredicted RBP5.1□□□□□ -1.59
PRPF38B-205ENST00000485810 PDE3AQ14432 1141 aa5.1□□□□□ -1.59
PRPF38B-205ENST00000485810 DSC3Q14574 896 aa5.1□□□□□ -1.59
PRPF38B-205ENST00000485810 KRTAP19-4Q3LI73 84 aa5.1□□□□□ -1.59
PRPF38B-205ENST00000485810 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.1□□□□□ -1.59
PRPF38B-205ENST00000485810 ZFYVE27Q5T4F4 411 aa5.1□□□□□ -1.59
PRPF38B-205ENST00000485810 NXPE4Q6UWF7 544 aa5.1□□□□□ -1.59
PRPF38B-205ENST00000485810 DTHD1Q6ZMT9 781 aa5.1□□□□□ -1.59
PRPF38B-205ENST00000485810 KRBA2Q6ZNG9 492 aa5.1□□□□□ -1.59
PRPF38B-205ENST00000485810 TMEM40Q8WWA1 233 aa5.1□□□□□ -1.59
PRPF38B-205ENST00000485810 SLC38A3Q99624 504 aa5.1□□□□□ -1.59
PRPF38B-205ENST00000485810 BCO2Q9BYV7 579 aa5.1□□□□□ -1.59
PRPF38B-205ENST00000485810 NLRP2Q9NX02 1062 aa5.1□□□□□ -1.59
PRPF38B-205ENST00000485810 VAV3Q9UKW4 847 aa5.1□□□□□ -1.59
PRPF38B-205ENST00000485810 SYNJ2O15056 1496 aa5.1□□□□□ -1.59
PRPF38B-205ENST00000485810 CAMSAP2Q08AD1 1489 aa5.1□□□□□ -1.59
PRPF38B-205ENST00000485810 ADGBQ8N7X0 1667 aa5.1□□□□□ -1.59
PRPF38B-205ENST00000485810 PTPRGP23470 1445 aa5.09□□□□□ -1.59
PRPF38B-205ENST00000485810 ARHGEF12Q9NZN5 1544 aa5.09□□□□□ -1.59
PRPF38B-205ENST00000485810 ZNF608Q9ULD9 1512 aaPredicted RBP5.09□□□□□ -1.59
PRPF38B-205ENST00000485810 hCG_2014768A0A024R1R8 64 aa5.09□□□□□ -1.59
PRPF38B-205ENST00000485810 ZNF16P17020 682 aaPredicted RBP5.09□□□□□ -1.59
PRPF38B-205ENST00000485810 MAPK8P45983 427 aa5.09□□□□□ -1.59
PRPF38B-205ENST00000485810 PRKCQQ04759 706 aa5.09□□□□□ -1.59
PRPF38B-205ENST00000485810 HP1BP3Q5SSJ5 553 aaPredicted RBP5.09□□□□□ -1.59
PRPF38B-205ENST00000485810 PRPF40BQ6NWY9 871 aaKnown RBP5.09□□□□□ -1.59
PRPF38B-205ENST00000485810 FAM214BQ7L5A3 538 aa5.09□□□□□ -1.59
PRPF38B-205ENST00000485810 DPH6Q7L8W6 267 aa5.09□□□□□ -1.59
PRPF38B-205ENST00000485810 KSR1Q8IVT5 923 aa5.09□□□□□ -1.59
PRPF38B-205ENST00000485810 MTA3Q9BTC8 594 aa5.09□□□□□ -1.59
PRPF38B-205ENST00000485810 ZFYVE1Q9HBF4 777 aa5.09□□□□□ -1.59
PRPF38B-205ENST00000485810 GPN3Q9UHW5 284 aaPredicted RBP5.09□□□□□ -1.59
PRPF38B-205ENST00000485810 WWC3Q9ULE0 1092 aa5.09□□□□□ -1.59
PRPF38B-205ENST00000485810 AKAP2Q9Y2D5 859 aa5.09□□□□□ -1.59
PRPF38B-205ENST00000485810 ROCK2O75116 1388 aaKnown RBP5.09□□□□□ -1.59
PRPF38B-205ENST00000485810 CROCC2H7BZ55 1655 aa5.08□□□□□ -1.6
PRPF38B-205ENST00000485810 EIF4G3O43432 1585 aaKnown RBP5.08□□□□□ -1.6
PRPF38B-205ENST00000485810 ABCA8O94911 1581 aa5.08□□□□□ -1.6
PRPF38B-205ENST00000485810 ABCC10Q5T3U5 1492 aa5.08□□□□□ -1.6
PRPF38B-205ENST00000485810 RALGAPBQ86X10 1494 aa5.08□□□□□ -1.6
PRPF38B-205ENST00000485810 ANKRD30AQ9BXX3 1397 aa5.08□□□□□ -1.6
PRPF38B-205ENST00000485810 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.08□□□□□ -1.6
PRPF38B-205ENST00000485810 TREHO43280 583 aa5.08□□□□□ -1.6
PRPF38B-205ENST00000485810 NBPF8Q3BBV2 869 aa5.08□□□□□ -1.6
PRPF38B-205ENST00000485810 RINLQ6ZS11 566 aa5.08□□□□□ -1.6
PRPF38B-205ENST00000485810 CCAR1Q8IX12 1150 aaKnown RBP5.08□□□□□ -1.6
PRPF38B-205ENST00000485810 PI4K2BQ8TCG2 481 aa5.08□□□□□ -1.6
PRPF38B-205ENST00000485810 STK35Q8TDR2 534 aa5.08□□□□□ -1.6
PRPF38B-205ENST00000485810 BCL2L13Q9BXK5 485 aa5.08□□□□□ -1.6
PRPF38B-205ENST00000485810 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.08□□□□□ -1.6
PRPF38B-205ENST00000485810 TRAK1Q9UPV9 953 aa5.08□□□□□ -1.6
PRPF38B-205ENST00000485810 KIF7Q2M1P5 1343 aa5.08□□□□□ -1.6
PRPF38B-205ENST00000485810 FANCIQ9NVI1 1328 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms