RNA–Protein interactions for RNA: ENST00000485790.1

SCAF4-206, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 2

Gene SCAF4, Length 1,282 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-206ENST00000485790 C12orf42Q96LP6 360 aa16.63■□□□□ 0.25
SCAF4-206ENST00000485790 HOXC10Q9NYD6 342 aa16.63■□□□□ 0.25
SCAF4-206ENST00000485790 ZNF532Q9HCE3 1301 aa16.63■□□□□ 0.25
SCAF4-206ENST00000485790 ATP5JP18859 108 aa16.62■□□□□ 0.25
SCAF4-206ENST00000485790 RGS2P41220 211 aa16.62■□□□□ 0.25
SCAF4-206ENST00000485790 ZYXQ15942 572 aaKnown RBP16.62■□□□□ 0.25
SCAF4-206ENST00000485790 SHROOM1Q2M3G4 852 aaPredicted RBP16.62■□□□□ 0.25
SCAF4-206ENST00000485790 Q3C1V9 767 aa16.62■□□□□ 0.25
SCAF4-206ENST00000485790 ZSCAN25Q6NSZ9 544 aa16.62■□□□□ 0.25
SCAF4-206ENST00000485790 CHRDL2Q6WN34 429 aa16.62■□□□□ 0.25
SCAF4-206ENST00000485790 CATSPERGQ6ZRH7 1159 aa16.62■□□□□ 0.25
SCAF4-206ENST00000485790 PAWRQ96IZ0 340 aaKnown RBP16.62■□□□□ 0.25
SCAF4-206ENST00000485790 TXNRD2Q9NNW7 524 aa16.62■□□□□ 0.25
SCAF4-206ENST00000485790 PAG1Q9NWQ8 432 aa16.62■□□□□ 0.25
SCAF4-206ENST00000485790 ZKSCAN1P17029 563 aaPredicted RBP16.61■□□□□ 0.25
SCAF4-206ENST00000485790 SIRT2Q8IXJ6 389 aa16.61■□□□□ 0.25
SCAF4-206ENST00000485790 EDC3Q96F86 508 aaKnown RBP16.61■□□□□ 0.25
SCAF4-206ENST00000485790 NBPF3Q9H094 633 aa16.61■□□□□ 0.25
SCAF4-206ENST00000485790 BOLA2Q9H3K6 86 aa16.61■□□□□ 0.25
SCAF4-206ENST00000485790 ATP8A2Q9NTI2 1148 aa16.61■□□□□ 0.25
SCAF4-206ENST00000485790 SWAP70Q9UH65 585 aa16.61■□□□□ 0.25
SCAF4-206ENST00000485790 SHMT1P34896 483 aa16.6■□□□□ 0.25
SCAF4-206ENST00000485790 COG2Q14746 738 aa16.6■□□□□ 0.25
SCAF4-206ENST00000485790 WDR78Q5VTH9 848 aa16.6■□□□□ 0.25
SCAF4-206ENST00000485790 GPR142Q7Z601 462 aa16.6■□□□□ 0.25
SCAF4-206ENST00000485790 ACER1Q8TDN7 264 aa16.6■□□□□ 0.25
SCAF4-206ENST00000485790 IVNS1ABPQ9Y6Y0 642 aa16.6■□□□□ 0.25
SCAF4-206ENST00000485790 DOCK2Q92608 1830 aa16.6■□□□□ 0.25
SCAF4-206ENST00000485790 PRKAR2AP13861 404 aaKnown RBP16.59■□□□□ 0.25
SCAF4-206ENST00000485790 FXR1P51114 621 aaKnown RBP eCLIP16.59■□□□□ 0.25
SCAF4-206ENST00000485790 SEPT2Q15019 361 aa16.59■□□□□ 0.25
SCAF4-206ENST00000485790 HAUS7Q99871 368 aa16.59■□□□□ 0.25
SCAF4-206ENST00000485790 LRRCC1Q9C099 1032 aa16.59■□□□□ 0.25
SCAF4-206ENST00000485790 SH2D4AQ9H788 454 aa16.59■□□□□ 0.25
SCAF4-206ENST00000485790 DCP1AQ9NPI6 582 aaPredicted RBP16.59■□□□□ 0.25
SCAF4-206ENST00000485790 TCRBV5S4A2TA0A5A2 114 aa16.58■□□□□ 0.24
SCAF4-206ENST00000485790 SLC15A5A6NIM6 579 aa16.58■□□□□ 0.24
SCAF4-206ENST00000485790 VCAM1P19320 739 aa16.58■□□□□ 0.24
SCAF4-206ENST00000485790 GABPAQ06546 454 aa16.58■□□□□ 0.24
SCAF4-206ENST00000485790 MAP2K5Q13163 448 aa16.58■□□□□ 0.24
SCAF4-206ENST00000485790 MORN1Q5T089 497 aa16.58■□□□□ 0.24
SCAF4-206ENST00000485790 MFSD14CQ5VZR4 134 aa16.58■□□□□ 0.24
SCAF4-206ENST00000485790 TMEM179Q6ZVK1 233 aa16.58■□□□□ 0.24
SCAF4-206ENST00000485790 TRIB2Q92519 343 aa16.58■□□□□ 0.24
SCAF4-206ENST00000485790 CCDC17Q96LX7 622 aa16.58■□□□□ 0.24
SCAF4-206ENST00000485790 PORCNQ9H237 461 aa16.58■□□□□ 0.24
SCAF4-206ENST00000485790 RPAP3Q9H6T3 665 aaPredicted RBP16.58■□□□□ 0.24
SCAF4-206ENST00000485790 ARMT1Q9H993 441 aa16.58■□□□□ 0.24
SCAF4-206ENST00000485790 BRCA2P51587 3418 aa16.57■□□□□ 0.24
SCAF4-206ENST00000485790 DOCK1Q14185 1865 aa16.57■□□□□ 0.24
SCAF4-206ENST00000485790 RBBP6Q7Z6E9 1792 aaKnown RBP16.57■□□□□ 0.24
SCAF4-206ENST00000485790 STRNO43815 780 aa16.57■□□□□ 0.24
SCAF4-206ENST00000485790 PEX10O60683 326 aa16.57■□□□□ 0.24
SCAF4-206ENST00000485790 ADD2P35612 726 aa16.57■□□□□ 0.24
SCAF4-206ENST00000485790 ATP2B2Q01814 1243 aa16.57■□□□□ 0.24
SCAF4-206ENST00000485790 TRIM32Q13049 653 aa16.57■□□□□ 0.24
SCAF4-206ENST00000485790 UBE3CQ15386 1083 aa16.57■□□□□ 0.24
SCAF4-206ENST00000485790 MAP3K21Q5TCX8 1036 aa16.57■□□□□ 0.24
SCAF4-206ENST00000485790 LBX2Q6XYB7 198 aa16.57■□□□□ 0.24
SCAF4-206ENST00000485790 LCORLQ8N3X6 602 aa16.57■□□□□ 0.24
SCAF4-206ENST00000485790 SDR42E1Q8WUS8 393 aa16.57■□□□□ 0.24
SCAF4-206ENST00000485790 USP6NLQ92738 828 aa16.57■□□□□ 0.24
SCAF4-206ENST00000485790 GPATCH3Q96I76 525 aa16.57■□□□□ 0.24
SCAF4-206ENST00000485790 C11orf49Q9H6J7 331 aa16.57■□□□□ 0.24
SCAF4-206ENST00000485790 ARHGEF10LQ9HCE6 1279 aa16.57■□□□□ 0.24
SCAF4-206ENST00000485790 RBM27Q9P2N5 1060 aaKnown RBP16.57■□□□□ 0.24
SCAF4-206ENST00000485790 OGDHLQ9ULD0 1010 aa16.57■□□□□ 0.24
SCAF4-206ENST00000485790 MBD4O95243 580 aa16.56■□□□□ 0.24
SCAF4-206ENST00000485790 PTPREP23469 700 aa16.56■□□□□ 0.24
SCAF4-206ENST00000485790 CACNB2Q08289 660 aaPredicted RBP16.56■□□□□ 0.24
SCAF4-206ENST00000485790 LPAR1Q92633 364 aa16.56■□□□□ 0.24
SCAF4-206ENST00000485790 APBA2Q99767 749 aa16.56■□□□□ 0.24
SCAF4-206ENST00000485790 TANGO6Q9C0B7 1094 aa16.56■□□□□ 0.24
SCAF4-206ENST00000485790 SLC5A4Q9NY91 659 aa16.56■□□□□ 0.24
SCAF4-206ENST00000485790 A0A1W2PPC1 479 aa16.55■□□□□ 0.24
SCAF4-206ENST00000485790 GUCY1A2P33402 732 aa16.55■□□□□ 0.24
SCAF4-206ENST00000485790 DPP9Q86TI2 863 aa16.55■□□□□ 0.24
SCAF4-206ENST00000485790 MB21D1Q8N884 522 aa16.55■□□□□ 0.24
SCAF4-206ENST00000485790 SLC4A4Q9Y6R1 1079 aa16.55■□□□□ 0.24
SCAF4-206ENST00000485790 USP17L12C9JPN9 530 aa16.54■□□□□ 0.24
SCAF4-206ENST00000485790 USP17L21D6R901 530 aa16.54■□□□□ 0.24
SCAF4-206ENST00000485790 PRKAB2O43741 272 aa16.54■□□□□ 0.24
SCAF4-206ENST00000485790 C12orf60Q5U649 245 aa16.54■□□□□ 0.24
SCAF4-206ENST00000485790 KANSL2Q9H9L4 492 aa16.54■□□□□ 0.24
SCAF4-206ENST00000485790 ECHDC1Q9NTX5 307 aa16.54■□□□□ 0.24
SCAF4-206ENST00000485790 ZSWIM8A7E2V4 1837 aa16.54■□□□□ 0.24
SCAF4-206ENST00000485790 A0A1W2PRG0 241 aa16.53■□□□□ 0.24
SCAF4-206ENST00000485790 MSCO60682 206 aa16.53■□□□□ 0.24
SCAF4-206ENST00000485790 CNMDO75829 334 aa16.53■□□□□ 0.24
SCAF4-206ENST00000485790 CYP2D6P10635 497 aa16.53■□□□□ 0.24
SCAF4-206ENST00000485790 CDK8P49336 464 aa16.53■□□□□ 0.24
SCAF4-206ENST00000485790 CCL14Q16627 93 aa16.53■□□□□ 0.24
SCAF4-206ENST00000485790 LRRFIP1Q32MZ4 808 aaKnown RBP16.53■□□□□ 0.24
SCAF4-206ENST00000485790 POTEEQ6S8J3 1075 aa16.53■□□□□ 0.24
SCAF4-206ENST00000485790 DIS3LQ8TF46 1054 aaKnown RBP16.53■□□□□ 0.24
SCAF4-206ENST00000485790 DYNLL2Q96FJ2 89 aa16.53■□□□□ 0.24
SCAF4-206ENST00000485790 BTBD7Q9P203 1132 aa16.53■□□□□ 0.24
SCAF4-206ENST00000485790 STAP2Q9UGK3 403 aa16.53■□□□□ 0.24
SCAF4-206ENST00000485790 TMX2Q9Y320 296 aa16.53■□□□□ 0.24
SCAF4-206ENST00000485790 SPDYE16A6NNV3 312 aaPredicted RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms