RNA–Protein interactions for RNA: ENST00000485737.1

SMARCC1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-206ENST00000485737 TIGD1Q96MW7 591 aa5.45□□□□□ -1.54
SMARCC1-206ENST00000485737 AGXT2Q9BYV1 514 aa5.45□□□□□ -1.54
SMARCC1-206ENST00000485737 NAT10Q9H0A0 1025 aaKnown RBP5.45□□□□□ -1.54
SMARCC1-206ENST00000485737 ZNF446Q9NWS9 450 aa5.45□□□□□ -1.54
SMARCC1-206ENST00000485737 CALCOCO1Q9P1Z2 691 aa5.45□□□□□ -1.54
SMARCC1-206ENST00000485737 TFIP11Q9UBB9 837 aaKnown RBP5.45□□□□□ -1.54
SMARCC1-206ENST00000485737 DBF4Q9UBU7 674 aaPredicted RBP5.45□□□□□ -1.54
SMARCC1-206ENST00000485737 MKRN1Q9UHC7 482 aaKnown RBP5.45□□□□□ -1.54
SMARCC1-206ENST00000485737 PARP3Q9Y6F1 533 aa5.45□□□□□ -1.54
SMARCC1-206ENST00000485737 DDX60Q8IY21 1712 aaKnown RBP5.45□□□□□ -1.54
SMARCC1-206ENST00000485737 NEDD4P46934 1319 aa5.45□□□□□ -1.54
SMARCC1-206ENST00000485737 SH3TC1Q8TE82 1336 aa5.45□□□□□ -1.54
SMARCC1-206ENST00000485737 PXDNQ92626 1479 aa5.45□□□□□ -1.54
SMARCC1-206ENST00000485737 PALLDQ8WX93 1383 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 PLEKHG2Q9H7P9 1386 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 SPEF2Q9C093 1822 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 PHF20L1A8MW92 1017 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 BECN2A8MW95 431 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 H3BQV1 296 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 GRM8O00222 908 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 CDK2AP1O14519 115 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 ZNF609O15014 1411 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 ATP8B1O43520 1251 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 MYO1BO43795 1136 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 JAK2O60674 1132 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 KINO60870 393 aaKnown RBP5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 HMGB1P09429 215 aaKnown RBP5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 SLURP2P0DP57 97 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 ATP5JP18859 108 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 CYP2C19P33261 490 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 MARSP56192 900 aaKnown RBP5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 FGD1P98174 961 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 COL9A3Q14050 684 aaPredicted RBP5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 BMS1Q14692 1282 aaKnown RBP5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 NAA30Q147X3 362 aaPredicted RBP5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 TBCELQ5QJ74 424 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 E4F1Q66K89 784 aaPredicted RBP5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 CCDC102BQ68D86 513 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 LYPD4Q6UWN0 246 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 KSR2Q6VAB6 950 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 NBPF11Q86T75 865 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 ZNF589Q86UQ0 364 aaPredicted RBP5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 ALYREFQ86V81 257 aaKnown RBP5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 FCHSD1Q86WN1 690 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 CCAR1Q8IX12 1150 aaKnown RBP5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 TNS4Q8IZW8 715 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 FBXL16Q8N461 479 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 OGFOD1Q8N543 542 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 NSUN7Q8NE18 718 aaKnown RBP5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 MRPS27Q92552 414 aaKnown RBP5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 EAF2Q96CJ1 260 aaPredicted RBP5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 KAZALD1Q96I82 304 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 PPP1R13BQ96KQ4 1090 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 ZNF396Q96N95 335 aaPredicted RBP5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 NEK1Q96PY6 1258 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 SLC4A9Q96Q91 983 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 FSD1Q9BTV5 496 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 SRRTQ9BXP5 876 aaKnown RBP5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 UBXN6Q9BZV1 441 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 TSPYL1Q9H0U9 437 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 GOLPH3LQ9H4A5 285 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 DNAAF2Q9NVR5 837 aaKnown RBP5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 TMEM51Q9NW97 253 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 PHF24Q9UPV7 400 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 KIAA1024Q9UPX6 916 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.44□□□□□ -1.544e-14■■■■□ 21.2
SMARCC1-206ENST00000485737 USP16Q9Y5T5 823 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 USP3Q9Y6I4 520 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 TAF6LQ9Y6J9 622 aa5.44□□□□□ -1.54
SMARCC1-206ENST00000485737 TMEM94Q12767 1356 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 PTPDC1A2A3K4 754 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 IKBKBO14920 756 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 NRDCO43847 1150 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 ZRANB2O95218 330 aaKnown RBP eCLIP5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 THBS1P07996 1170 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 TATP17735 454 aaPredicted RBP5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 EVCP57679 992 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 CLDN10P78369 228 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 SCRN1Q12765 414 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 G3BP1Q13283 466 aaKnown RBP eCLIP5.43□□□□□ -1.545e-8■■□□□ 11.7
SMARCC1-206ENST00000485737 MUM1L1Q5H9M0 696 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 AKAP4Q5JQC9 854 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 FILIP1Q7Z7B0 1213 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 SLC9A9Q8IVB4 645 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 FMR1NBQ8N0W7 255 aaPredicted RBP5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 AOPEPQ8N6M6 819 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 FSIP1Q8NA03 581 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 ABHD17AQ96GS6 310 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 SUCLG2Q96I99 432 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 COPRSQ9NQ92 184 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 TLR7Q9NYK1 1049 aaKnown RBP5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 C9orf78Q9NZ63 289 aaPredicted RBP5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 RTEL1Q9NZ71 1219 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 DNAI1Q9UI46 699 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 ZNF232Q9UNY5 417 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 PA2G4Q9UQ80 394 aaKnown RBP5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 MAP3K2Q9Y2U5 619 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 CHMP3Q9Y3E7 222 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 TBX22Q9Y458 520 aa5.43□□□□□ -1.54
SMARCC1-206ENST00000485737 FHOD1Q9Y613 1164 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms