RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 SNAPC2Q13487 334 aa14.08□□□□□ -0.16
APTX-227ENST00000485479 TREML2Q5T2D2 321 aa14.08□□□□□ -0.16
APTX-227ENST00000485479 MFSD6Q6ZSS7 791 aa14.08□□□□□ -0.16
APTX-227ENST00000485479 TMEM179Q6ZVK1 233 aa14.08□□□□□ -0.16
APTX-227ENST00000485479 RASGRP2Q7LDG7 609 aa14.08□□□□□ -0.16
APTX-227ENST00000485479 SIAH1Q8IUQ4 282 aa14.08□□□□□ -0.16
APTX-227ENST00000485479 SPICE1Q8N0Z3 855 aa14.08□□□□□ -0.16
APTX-227ENST00000485479 STAG1Q8WVM7 1258 aa14.08□□□□□ -0.16
APTX-227ENST00000485479 CEP95Q96GE4 821 aa14.08□□□□□ -0.16
APTX-227ENST00000485479 MTMR7Q9Y216 660 aa14.08□□□□□ -0.16
APTX-227ENST00000485479 UNCXA6NJT0 531 aa14.07□□□□□ -0.16
APTX-227ENST00000485479 BTBD19C9JJ37 291 aa14.07□□□□□ -0.16
APTX-227ENST00000485479 TRPA1O75762 1119 aa14.07□□□□□ -0.16
APTX-227ENST00000485479 SEC24BO95487 1268 aa14.07□□□□□ -0.16
APTX-227ENST00000485479 EEF2P13639 858 aaKnown RBP14.07□□□□□ -0.16
APTX-227ENST00000485479 GTF2A2P52657 109 aa14.07□□□□□ -0.16
APTX-227ENST00000485479 MOGSQ13724 837 aa14.07□□□□□ -0.16
APTX-227ENST00000485479 KIAA1755Q5JYT7 1200 aa14.07□□□□□ -0.16
APTX-227ENST00000485479 CHST3Q7LGC8 479 aa14.07□□□□□ -0.16
APTX-227ENST00000485479 R3HDMLQ9H3Y0 253 aa14.07□□□□□ -0.16
APTX-227ENST00000485479 CTNNA3Q9UI47 895 aa14.07□□□□□ -0.16
APTX-227ENST00000485479 KCNH4Q9UQ05 1017 aa14.07□□□□□ -0.16
APTX-227ENST00000485479 U3KPZ7 1027 aaPredicted RBP14.07□□□□□ -0.16
APTX-227ENST00000485479 A0A0G2JLL6 359 aaPredicted RBP14.07□□□□□ -0.16
APTX-227ENST00000485479 SLC27A2O14975 620 aa14.07□□□□□ -0.16
APTX-227ENST00000485479 KDM4AO75164 1064 aa14.07□□□□□ -0.16
APTX-227ENST00000485479 MAP2K2P36507 400 aa14.07□□□□□ -0.16
APTX-227ENST00000485479 PRRT2Q7Z6L0 340 aaPredicted RBP14.07□□□□□ -0.16
APTX-227ENST00000485479 IFNL1Q8IU54 200 aa14.07□□□□□ -0.16
APTX-227ENST00000485479 LRRC47Q8N1G4 583 aaKnown RBP14.07□□□□□ -0.16
APTX-227ENST00000485479 IL17RBQ9NRM6 502 aa14.07□□□□□ -0.16
APTX-227ENST00000485479 MYH4Q9Y623 1939 aa14.06□□□□□ -0.16
APTX-227ENST00000485479 BRCA2P51587 3418 aa14.06□□□□□ -0.16
APTX-227ENST00000485479 MANSC4A6NHS7 340 aaPredicted RBP14.06□□□□□ -0.16
APTX-227ENST00000485479 USP17L10C9JJH3 530 aa14.06□□□□□ -0.16
APTX-227ENST00000485479 CREB3L3Q68CJ9 461 aa14.06□□□□□ -0.16
APTX-227ENST00000485479 CCDC17Q96LX7 622 aa14.06□□□□□ -0.16
APTX-227ENST00000485479 PEX10O60683 326 aa14.05□□□□□ -0.16
APTX-227ENST00000485479 TBC1D8O95759 1140 aa14.05□□□□□ -0.16
APTX-227ENST00000485479 HSPA1AP0DMV8 641 aaKnown RBP14.05□□□□□ -0.16
APTX-227ENST00000485479 HSPA1BP0DMV9 641 aaKnown RBP14.05□□□□□ -0.16
APTX-227ENST00000485479 BACE1P56817 501 aa14.05□□□□□ -0.16
APTX-227ENST00000485479 NECTIN1Q15223 517 aa14.05□□□□□ -0.16
APTX-227ENST00000485479 SAMD1Q6SPF0 538 aaPredicted RBP14.05□□□□□ -0.16
APTX-227ENST00000485479 RASEFQ8IZ41 740 aa14.05□□□□□ -0.16
APTX-227ENST00000485479 JMYQ8N9B5 988 aa14.05□□□□□ -0.16
APTX-227ENST00000485479 AS3MTQ9HBK9 375 aa14.05□□□□□ -0.16
APTX-227ENST00000485479 EMILIN3Q9NT22 766 aa14.05□□□□□ -0.16
APTX-227ENST00000485479 STX8Q9UNK0 236 aa14.05□□□□□ -0.16
APTX-227ENST00000485479 HTTP42858 3142 aa14.05□□□□□ -0.16
APTX-227ENST00000485479 E7EWF7 191 aa14.05□□□□□ -0.16
APTX-227ENST00000485479 ORC4O43929 436 aa14.05□□□□□ -0.16
APTX-227ENST00000485479 FGRP09769 529 aa14.05□□□□□ -0.16
APTX-227ENST00000485479 CYP2C8P10632 490 aa14.05□□□□□ -0.16
APTX-227ENST00000485479 CETPP11597 493 aa14.05□□□□□ -0.16
APTX-227ENST00000485479 SREBF2Q12772 1141 aa14.05□□□□□ -0.16
APTX-227ENST00000485479 C8orf34Q49A92 452 aa14.05□□□□□ -0.16
APTX-227ENST00000485479 ZNF287Q9HBT7 754 aa14.05□□□□□ -0.16
APTX-227ENST00000485479 RNF186Q9NXI6 227 aa14.05□□□□□ -0.16
APTX-227ENST00000485479 CLIP2Q9UDT6 1046 aa14.05□□□□□ -0.16
APTX-227ENST00000485479 LOC285556D6RIA3 1793 aa14.04□□□□□ -0.16
APTX-227ENST00000485479 IGKV6D-41A0A0C4DH26 115 aa14.04□□□□□ -0.16
APTX-227ENST00000485479 TM4SF4P48230 202 aa14.04□□□□□ -0.16
APTX-227ENST00000485479 GPAT2Q6NUI2 795 aa14.04□□□□□ -0.16
APTX-227ENST00000485479 CYB5R4Q7L1T6 521 aa14.04□□□□□ -0.16
APTX-227ENST00000485479 NEDD1Q8NHV4 660 aa14.04□□□□□ -0.16
APTX-227ENST00000485479 NUP88Q99567 741 aaPredicted RBP14.04□□□□□ -0.16
APTX-227ENST00000485479 WDR18Q9BV38 432 aa14.04□□□□□ -0.16
APTX-227ENST00000485479 WBP1LQ9NX94 342 aa14.04□□□□□ -0.16
APTX-227ENST00000485479 ZSWIM5Q9P217 1185 aa14.04□□□□□ -0.16
APTX-227ENST00000485479 PDHXO00330 501 aa14.03□□□□□ -0.16
APTX-227ENST00000485479 CXCL11O14625 94 aa14.03□□□□□ -0.16
APTX-227ENST00000485479 FOXN1O15353 648 aa14.03□□□□□ -0.16
APTX-227ENST00000485479 ADCK5Q3MIX3 580 aa14.03□□□□□ -0.16
APTX-227ENST00000485479 TCEANC2Q96MN5 208 aa14.03□□□□□ -0.16
APTX-227ENST00000485479 RNF41Q9H4P4 317 aaPredicted RBP14.03□□□□□ -0.16
APTX-227ENST00000485479 KANSL2Q9H9L4 492 aa14.03□□□□□ -0.16
APTX-227ENST00000485479 MTMR4Q9NYA4 1195 aa14.03□□□□□ -0.16
APTX-227ENST00000485479 CPA1P15085 419 aa14.03□□□□□ -0.16
APTX-227ENST00000485479 VCAM1P19320 739 aa14.03□□□□□ -0.16
APTX-227ENST00000485479 MAP2K1Q02750 393 aaPredicted RBP14.03□□□□□ -0.16
APTX-227ENST00000485479 CRHR2Q13324 411 aa14.03□□□□□ -0.16
APTX-227ENST00000485479 ESR2Q92731 530 aa14.03□□□□□ -0.16
APTX-227ENST00000485479 BEGAINQ9BUH8 593 aa14.03□□□□□ -0.16
APTX-227ENST00000485479 LRRC2Q9BYS8 371 aa14.03□□□□□ -0.16
APTX-227ENST00000485479 ARHGEF10LQ9HCE6 1279 aa14.03□□□□□ -0.16
APTX-227ENST00000485479 GPHNQ9NQX3 736 aaPredicted RBP14.03□□□□□ -0.16
APTX-227ENST00000485479 PLIN4Q96Q06 1357 aa14.03□□□□□ -0.16
APTX-227ENST00000485479 TESPA1A2RU30 521 aaPredicted RBP14.02□□□□□ -0.16
APTX-227ENST00000485479 REC8O95072 547 aa14.02□□□□□ -0.16
APTX-227ENST00000485479 TAF1CQ15572 869 aaPredicted RBP14.02□□□□□ -0.16
APTX-227ENST00000485479 SENP2Q9HC62 589 aa14.02□□□□□ -0.16
APTX-227ENST00000485479 TTLL1O95922 423 aa14.02□□□□□ -0.17
APTX-227ENST00000485479 KIAA1683Q9H0B3 1180 aa14.02□□□□□ -0.17
APTX-227ENST00000485479 TMOD4Q9NZQ9 345 aa14.02□□□□□ -0.17
APTX-227ENST00000485479 ISY1Q9ULR0 285 aaKnown RBP14.02□□□□□ -0.17
APTX-227ENST00000485479 ANTXR2P58335 489 aa14.01□□□□□ -0.17
APTX-227ENST00000485479 RCSD1Q6JBY9 416 aa14.01□□□□□ -0.17
APTX-227ENST00000485479 RALYLQ86SE5 291 aaKnown RBP14.01□□□□□ -0.17
APTX-227ENST00000485479 USP26Q9BXU7 913 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms