RNA–Protein interactions for RNA: ENST00000485324.1

SLC6A8-210, Transcript of solute carrier family 6 member 8, humanhuman

TSL 2

Gene SLC6A8, Length 2,401 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-210ENST00000485324 SYCP1Q15431 976 aa23.25■■□□□ 1.31
SLC6A8-210ENST00000485324 NT5DC1Q5TFE4 455 aa23.25■■□□□ 1.31
SLC6A8-210ENST00000485324 IQCA1Q86XH1 822 aa23.25■■□□□ 1.31
SLC6A8-210ENST00000485324 DHX58Q96C10 678 aa23.25■■□□□ 1.31
SLC6A8-210ENST00000485324 HOOK1Q9UJC3 728 aaKnown RBP23.25■■□□□ 1.31
SLC6A8-210ENST00000485324 PRPF3O43395 683 aaKnown RBP23.25■■□□□ 1.31
SLC6A8-210ENST00000485324 VEGFAP15692 232 aaPredicted RBP23.25■■□□□ 1.31
SLC6A8-210ENST00000485324 ELOA2Q8IYF1 753 aaPredicted RBP23.25■■□□□ 1.31
SLC6A8-210ENST00000485324 CEP131Q9UPN4 1083 aa23.25■■□□□ 1.31
SLC6A8-210ENST00000485324 PSDA5PKW4 1024 aaPredicted RBP23.24■■□□□ 1.31
SLC6A8-210ENST00000485324 ADAMTS3O15072 1205 aa23.24■■□□□ 1.31
SLC6A8-210ENST00000485324 TOP1P11387 765 aaKnown RBP23.24■■□□□ 1.31
SLC6A8-210ENST00000485324 NPY5RQ15761 445 aa23.24■■□□□ 1.31
SLC6A8-210ENST00000485324 BARGINQ6ZT62 677 aa23.24■■□□□ 1.31
SLC6A8-210ENST00000485324 TXNRD3Q86VQ6 643 aa23.24■■□□□ 1.31
SLC6A8-210ENST00000485324 FGRP09769 529 aa23.24■■□□□ 1.31
SLC6A8-210ENST00000485324 AFMP43652 599 aa23.24■■□□□ 1.31
SLC6A8-210ENST00000485324 RPS8P62241 208 aaKnown RBP23.24■■□□□ 1.31
SLC6A8-210ENST00000485324 ZNF174Q15697 407 aa23.24■■□□□ 1.31
SLC6A8-210ENST00000485324 DCP1AQ9NPI6 582 aaPredicted RBP23.24■■□□□ 1.31
SLC6A8-210ENST00000485324 SRBD1Q8N5C6 995 aaKnown RBP23.23■■□□□ 1.31
SLC6A8-210ENST00000485324 SAMSN1Q9NSI8 373 aaKnown RBP23.23■■□□□ 1.31
SLC6A8-210ENST00000485324 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.23■■□□□ 1.31
SLC6A8-210ENST00000485324 XBP1P17861 261 aa23.23■■□□□ 1.31
SLC6A8-210ENST00000485324 TMTC3Q6ZXV5 915 aa23.23■■□□□ 1.31
SLC6A8-210ENST00000485324 LRRN4CLQ8ND94 238 aa23.23■■□□□ 1.31
SLC6A8-210ENST00000485324 PPP2R5BQ15173 497 aa23.22■■□□□ 1.31
SLC6A8-210ENST00000485324 TMX1Q9H3N1 280 aa23.22■■□□□ 1.31
SLC6A8-210ENST00000485324 CNTNAP5Q8WYK1 1306 aa23.22■■□□□ 1.31
SLC6A8-210ENST00000485324 ZNF18P17022 549 aa23.22■■□□□ 1.31
SLC6A8-210ENST00000485324 KCNJ6P48051 423 aa23.22■■□□□ 1.31
SLC6A8-210ENST00000485324 SLC10A5Q5PT55 438 aa23.22■■□□□ 1.31
SLC6A8-210ENST00000485324 SYMPKQ92797 1274 aaKnown RBP23.22■■□□□ 1.31
SLC6A8-210ENST00000485324 HIBADHP31937 336 aaKnown RBP23.21■■□□□ 1.31
SLC6A8-210ENST00000485324 AMIGO3Q86WK7 504 aa23.21■■□□□ 1.31
SLC6A8-210ENST00000485324 MLKLQ8NB16 471 aa23.21■■□□□ 1.31
SLC6A8-210ENST00000485324 DLEC1Q9Y238 1755 aa23.21■■□□□ 1.31
SLC6A8-210ENST00000485324 NRDCO43847 1150 aa23.21■■□□□ 1.31
SLC6A8-210ENST00000485324 CDK11BP21127 795 aaKnown RBP23.21■■□□□ 1.31
SLC6A8-210ENST00000485324 TMEM139Q8IV31 216 aa23.21■■□□□ 1.31
SLC6A8-210ENST00000485324 TNFRSF25Q93038 417 aa23.21■■□□□ 1.31
SLC6A8-210ENST00000485324 RBM28Q9NW13 759 aaKnown RBP23.21■■□□□ 1.31
SLC6A8-210ENST00000485324 NPHP1O15259 732 aa23.2■■□□□ 1.3
SLC6A8-210ENST00000485324 NBPF5PQ86XG9 351 aaPredicted RBP23.2■■□□□ 1.3
SLC6A8-210ENST00000485324 SPATA20Q8TB22 786 aa23.2■■□□□ 1.3
SLC6A8-210ENST00000485324 ENOX1Q8TC92 643 aaKnown RBP23.2■■□□□ 1.3
SLC6A8-210ENST00000485324 KIF2AO00139 706 aaPredicted RBP23.2■■□□□ 1.3
SLC6A8-210ENST00000485324 ELF2Q15723 593 aa23.2■■□□□ 1.3
SLC6A8-210ENST00000485324 HOMER1Q86YM7 354 aa23.2■■□□□ 1.3
SLC6A8-210ENST00000485324 STAMQ92783 540 aa23.2■■□□□ 1.3
SLC6A8-210ENST00000485324 NLRP3Q96P20 1036 aa23.2■■□□□ 1.3
SLC6A8-210ENST00000485324 FANCGO15287 622 aa23.19■■□□□ 1.3
SLC6A8-210ENST00000485324 CD44P16070 742 aaKnown RBP23.19■■□□□ 1.3
SLC6A8-210ENST00000485324 SMYD4Q8IYR2 804 aaPredicted RBP23.19■■□□□ 1.3
SLC6A8-210ENST00000485324 SETDB2Q96T68 719 aa23.19■■□□□ 1.3
SLC6A8-210ENST00000485324 CRNKL1Q9BZJ0 848 aaKnown RBP23.19■■□□□ 1.3
SLC6A8-210ENST00000485324 DDAH1O94760 285 aa23.19■■□□□ 1.3
SLC6A8-210ENST00000485324 SLU7O95391 586 aaKnown RBP23.19■■□□□ 1.3
SLC6A8-210ENST00000485324 TBX2Q13207 712 aaPredicted RBP23.19■■□□□ 1.3
SLC6A8-210ENST00000485324 KLHL10Q6JEL2 608 aa23.19■■□□□ 1.3
SLC6A8-210ENST00000485324 PAGE5Q96GU1 130 aa23.19■■□□□ 1.3
SLC6A8-210ENST00000485324 VWA3AA6NCI4 1184 aa23.18■■□□□ 1.3
SLC6A8-210ENST00000485324 MYO1BO43795 1136 aa23.18■■□□□ 1.3
SLC6A8-210ENST00000485324 ADKP55263 362 aaKnown RBP23.18■■□□□ 1.3
SLC6A8-210ENST00000485324 STX17P56962 302 aa23.18■■□□□ 1.3
SLC6A8-210ENST00000485324 CNTNAP4Q9C0A0 1308 aa23.18■■□□□ 1.3
SLC6A8-210ENST00000485324 ORC4O43929 436 aa23.18■■□□□ 1.3
SLC6A8-210ENST00000485324 USP17L8P0C7I0 530 aa23.18■■□□□ 1.3
SLC6A8-210ENST00000485324 CALM1P0DP23 149 aa23.18■■□□□ 1.3
SLC6A8-210ENST00000485324 CALM2P0DP24 149 aa23.18■■□□□ 1.3
SLC6A8-210ENST00000485324 CALM3P0DP25 149 aa23.18■■□□□ 1.3
SLC6A8-210ENST00000485324 PLCD1P51178 756 aa23.18■■□□□ 1.3
SLC6A8-210ENST00000485324 PTGDRQ13258 359 aa23.18■■□□□ 1.3
SLC6A8-210ENST00000485324 DHX8Q14562 1220 aaKnown RBP23.18■■□□□ 1.3
SLC6A8-210ENST00000485324 TTC38Q5R3I4 469 aa23.18■■□□□ 1.3
SLC6A8-210ENST00000485324 KANK3Q6NY19 840 aa23.18■■□□□ 1.3
SLC6A8-210ENST00000485324 REXO1L1PQ8IX06 675 aa23.18■■□□□ 1.3
SLC6A8-210ENST00000485324 CTCFLQ8NI51 663 aaPredicted RBP23.18■■□□□ 1.3
SLC6A8-210ENST00000485324 ERO1AQ96HE7 468 aa23.18■■□□□ 1.3
SLC6A8-210ENST00000485324 SEMA3EO15041 775 aa23.17■■□□□ 1.3
SLC6A8-210ENST00000485324 GNPATO15228 680 aa23.17■■□□□ 1.3
SLC6A8-210ENST00000485324 FAM182BQ5T319 152 aa23.17■■□□□ 1.3
SLC6A8-210ENST00000485324 TRIML1Q8N9V2 468 aa23.17■■□□□ 1.3
SLC6A8-210ENST00000485324 CGNQ9P2M7 1197 aaKnown RBP23.17■■□□□ 1.3
SLC6A8-210ENST00000485324 NARFQ9UHQ1 456 aa23.17■■□□□ 1.3
SLC6A8-210ENST00000485324 DNAI1Q9UI46 699 aa23.17■■□□□ 1.3
SLC6A8-210ENST00000485324 SLFN14P0C7P3 912 aa23.17■■□□□ 1.3
SLC6A8-210ENST00000485324 TRIM65Q6PJ69 517 aa23.17■■□□□ 1.3
SLC6A8-210ENST00000485324 PIK3AP1Q6ZUJ8 805 aa23.17■■□□□ 1.3
SLC6A8-210ENST00000485324 L2HGDHQ9H9P8 463 aa23.17■■□□□ 1.3
SLC6A8-210ENST00000485324 DACH1Q9UI36 760 aa23.17■■□□□ 1.3
SLC6A8-210ENST00000485324 COBLO75128 1261 aa23.16■■□□□ 1.3
SLC6A8-210ENST00000485324 PIP4K2BP78356 416 aa23.16■■□□□ 1.3
SLC6A8-210ENST00000485324 KMT5BQ4FZB7 885 aa23.16■■□□□ 1.3
SLC6A8-210ENST00000485324 RCSD1Q6JBY9 416 aa23.16■■□□□ 1.3
SLC6A8-210ENST00000485324 SH3RF1Q7Z6J0 888 aa23.16■■□□□ 1.3
SLC6A8-210ENST00000485324 LAMB1P07942 1786 aa23.16■■□□□ 1.3
SLC6A8-210ENST00000485324 TSPY2A6NKD2 308 aa23.16■■□□□ 1.3
SLC6A8-210ENST00000485324 PCP11498 1178 aaKnown RBP23.16■■□□□ 1.3
SLC6A8-210ENST00000485324 ETF1P62495 437 aaKnown RBP23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms