RNA–Protein interactions for RNA: ENST00000484988.2

SGIP1-211, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 3

Gene SGIP1, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-211ENST00000484988 ETV3P41162 512 aa5.01□□□□□ -1.61
SGIP1-211ENST00000484988 TXKP42681 527 aa5.01□□□□□ -1.61
SGIP1-211ENST00000484988 YARSP54577 528 aaKnown RBP5.01□□□□□ -1.61
SGIP1-211ENST00000484988 ZP2Q05996 745 aa5.01□□□□□ -1.61
SGIP1-211ENST00000484988 TNK2Q07912 1038 aa5.01□□□□□ -1.61
SGIP1-211ENST00000484988 IKZF1Q13422 519 aa5.01□□□□□ -1.61
SGIP1-211ENST00000484988 CDKAL1Q5VV42 579 aa5.01□□□□□ -1.61
SGIP1-211ENST00000484988 THAP5Q7Z6K1 395 aa5.01□□□□□ -1.61
SGIP1-211ENST00000484988 SLFN12Q8IYM2 578 aa5.01□□□□□ -1.61
SGIP1-211ENST00000484988 FAM13CQ8NE31 585 aa5.01□□□□□ -1.61
SGIP1-211ENST00000484988 CYB5D2Q8WUJ1 264 aa5.01□□□□□ -1.61
SGIP1-211ENST00000484988 ASIC4Q96FT7 647 aa5.01□□□□□ -1.61
SGIP1-211ENST00000484988 Q96M66 194 aa5.01□□□□□ -1.61
SGIP1-211ENST00000484988 RC3H2Q9HBD1 1191 aaKnown RBP5.01□□□□□ -1.61
SGIP1-211ENST00000484988 ATP13A1Q9HD20 1204 aa5.01□□□□□ -1.61
SGIP1-211ENST00000484988 REV1Q9UBZ9 1251 aa5.01□□□□□ -1.61
SGIP1-211ENST00000484988 CARMIL2Q6F5E8 1435 aa5□□□□□ -1.61
SGIP1-211ENST00000484988 H3BS24 57 aa5□□□□□ -1.61
SGIP1-211ENST00000484988 GRIN3BO60391 1043 aa5□□□□□ -1.61
SGIP1-211ENST00000484988 DNAJA2O60884 412 aa5□□□□□ -1.61
SGIP1-211ENST00000484988 HS2ST1Q7LGA3 356 aa5□□□□□ -1.61
SGIP1-211ENST00000484988 PIWIL2Q8TC59 973 aaKnown RBP5□□□□□ -1.61
SGIP1-211ENST00000484988 ZNF296Q8WUU4 475 aaPredicted RBP5□□□□□ -1.61
SGIP1-211ENST00000484988 PRDM7Q9NQW5 492 aa5□□□□□ -1.61
SGIP1-211ENST00000484988 ADAMTS1Q9UHI8 967 aa5□□□□□ -1.61
SGIP1-211ENST00000484988 GGT7Q9UJ14 662 aa5□□□□□ -1.61
SGIP1-211ENST00000484988 SUPT16HQ9Y5B9 1047 aaKnown RBP5□□□□□ -1.61
SGIP1-211ENST00000484988 KRTAP4-8A0A0G2JLE6 195 aa4.99□□□□□ -1.61
SGIP1-211ENST00000484988 RBM47A0AV96 593 aaKnown RBP4.99□□□□□ -1.61
SGIP1-211ENST00000484988 BIN1O00499 593 aa4.99□□□□□ -1.61
SGIP1-211ENST00000484988 TLR3O15455 904 aaKnown RBP4.99□□□□□ -1.61
SGIP1-211ENST00000484988 ATE1O95260 518 aa4.99□□□□□ -1.61
SGIP1-211ENST00000484988 SRFP11831 508 aa4.99□□□□□ -1.61
SGIP1-211ENST00000484988 KRTAP19-1Q8IUB9 90 aa4.99□□□□□ -1.61
SGIP1-211ENST00000484988 TMEM87AQ8NBN3 555 aa4.99□□□□□ -1.61
SGIP1-211ENST00000484988 FLAD1Q8NFF5 587 aa4.99□□□□□ -1.61
SGIP1-211ENST00000484988 UBE2FQ969M7 185 aa4.99□□□□□ -1.61
SGIP1-211ENST00000484988 KRTAP9-9Q9BYP9 154 aa4.99□□□□□ -1.61
SGIP1-211ENST00000484988 KRTAP9-4Q9BYQ2 154 aa4.99□□□□□ -1.61
SGIP1-211ENST00000484988 BCL11AQ9H165 835 aa4.99□□□□□ -1.61
SGIP1-211ENST00000484988 DUSP15Q9H1R2 295 aaPredicted RBP4.99□□□□□ -1.61
SGIP1-211ENST00000484988 CARS2Q9HA77 564 aaKnown RBP4.99□□□□□ -1.61
SGIP1-211ENST00000484988 BRMS1Q9HCU9 246 aa4.99□□□□□ -1.61
SGIP1-211ENST00000484988 SLC22A31A6NKX4 558 aa4.98□□□□□ -1.61
SGIP1-211ENST00000484988 CRKP46108 304 aa4.98□□□□□ -1.61
SGIP1-211ENST00000484988 CWF19L2Q2TBE0 894 aaKnown RBP4.98□□□□□ -1.61
SGIP1-211ENST00000484988 BAHD1Q8TBE0 780 aaPredicted RBP4.98□□□□□ -1.61
SGIP1-211ENST00000484988 CCDC74BQ96LY2 380 aa4.98□□□□□ -1.61
SGIP1-211ENST00000484988 BACH2Q9BYV9 841 aa4.98□□□□□ -1.61
SGIP1-211ENST00000484988 EHMT1Q9H9B1 1298 aa4.98□□□□□ -1.61
SGIP1-211ENST00000484988 GOLGA2P5Q9HBQ8 144 aa4.98□□□□□ -1.61
SGIP1-211ENST00000484988 ZSWIM5Q9P217 1185 aa4.98□□□□□ -1.61
SGIP1-211ENST00000484988 CTNND2Q9UQB3 1225 aa4.98□□□□□ -1.61
SGIP1-211ENST00000484988 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.98□□□□□ -1.61
SGIP1-211ENST00000484988 ESR1P03372 595 aa4.97□□□□□ -1.61
SGIP1-211ENST00000484988 DTWD2Q8NBA8 298 aa4.97□□□□□ -1.61
SGIP1-211ENST00000484988 RNF141Q8WVD5 230 aa4.97□□□□□ -1.61
SGIP1-211ENST00000484988 VWCEQ96DN2 955 aa4.97□□□□□ -1.61
SGIP1-211ENST00000484988 NT5C1AQ9BXI3 368 aa4.97□□□□□ -1.61
SGIP1-211ENST00000484988 GPR62Q9BZJ7 368 aa4.97□□□□□ -1.61
SGIP1-211ENST00000484988 C19orf73Q9NVV2 129 aa4.97□□□□□ -1.61
SGIP1-211ENST00000484988 KLHL3Q9UH77 587 aa4.97□□□□□ -1.61
SGIP1-211ENST00000484988 PCDHB14Q9Y5E9 798 aa4.97□□□□□ -1.61
SGIP1-211ENST00000484988 WASH4PA8MWX3 477 aa4.96□□□□□ -1.62
SGIP1-211ENST00000484988 RGS13O14921 159 aa4.96□□□□□ -1.62
SGIP1-211ENST00000484988 LRRN2O75325 713 aa4.96□□□□□ -1.62
SGIP1-211ENST00000484988 GAB4Q2WGN9 574 aa4.96□□□□□ -1.62
SGIP1-211ENST00000484988 TMPRSS7Q7RTY8 843 aa4.96□□□□□ -1.62
SGIP1-211ENST00000484988 SLITRK4Q8IW52 837 aa4.96□□□□□ -1.62
SGIP1-211ENST00000484988 REXO1Q8N1G1 1221 aaKnown RBP4.96□□□□□ -1.62
SGIP1-211ENST00000484988 EAF1Q96JC9 268 aaPredicted RBP4.96□□□□□ -1.62
SGIP1-211ENST00000484988 KREMEN1Q96MU8 473 aa4.96□□□□□ -1.62
SGIP1-211ENST00000484988 KIF2CQ99661 725 aa4.96□□□□□ -1.62
SGIP1-211ENST00000484988 METTL5Q9NRN9 209 aaKnown RBP4.96□□□□□ -1.62
SGIP1-211ENST00000484988 UBP1Q9NZI7 540 aa4.96□□□□□ -1.62
SGIP1-211ENST00000484988 VAMP1P23763 118 aa4.95□□□□□ -1.62
SGIP1-211ENST00000484988 ZNF76P36508 570 aa4.95□□□□□ -1.62
SGIP1-211ENST00000484988 GDNFP39905 211 aa4.95□□□□□ -1.62
SGIP1-211ENST00000484988 FANCCQ00597 558 aa4.95□□□□□ -1.62
SGIP1-211ENST00000484988 CLCQ05315 142 aa4.95□□□□□ -1.62
SGIP1-211ENST00000484988 MLECQ14165 292 aa4.95□□□□□ -1.62
SGIP1-211ENST00000484988 SEZ6Q53EL9 994 aa4.95□□□□□ -1.62
SGIP1-211ENST00000484988 ARSHQ5FYA8 562 aa4.95□□□□□ -1.62
SGIP1-211ENST00000484988 CDCP2Q5VXM1 449 aa4.95□□□□□ -1.62
SGIP1-211ENST00000484988 OGFOD2Q6N063 350 aa4.95□□□□□ -1.62
SGIP1-211ENST00000484988 POU5F2Q8N7G0 328 aa4.95□□□□□ -1.62
SGIP1-211ENST00000484988 TMEM40Q8WWA1 233 aa4.95□□□□□ -1.62
SGIP1-211ENST00000484988 FAM168AQ92567 244 aa4.95□□□□□ -1.62
SGIP1-211ENST00000484988 ASPNQ9BXN1 380 aa4.95□□□□□ -1.62
SGIP1-211ENST00000484988 TRIT1Q9H3H1 467 aaKnown RBP4.95□□□□□ -1.62
SGIP1-211ENST00000484988 GMIPQ9P107 970 aa4.95□□□□□ -1.62
SGIP1-211ENST00000484988 KCNH3Q9ULD8 1083 aa4.95□□□□□ -1.62
SGIP1-211ENST00000484988 UBOX5O94941 541 aa4.94□□□□□ -1.62
SGIP1-211ENST00000484988 TPP2P29144 1249 aaPredicted RBP4.94□□□□□ -1.62
SGIP1-211ENST00000484988 AFMP43652 599 aa4.94□□□□□ -1.62
SGIP1-211ENST00000484988 TNNI2P48788 182 aa4.94□□□□□ -1.62
SGIP1-211ENST00000484988 APOBRQ0VD83 1088 aa4.94□□□□□ -1.62
SGIP1-211ENST00000484988 TRIM26Q12899 539 aaPredicted RBP4.94□□□□□ -1.62
SGIP1-211ENST00000484988 TSPYL5Q86VY4 417 aaPredicted RBP4.94□□□□□ -1.62
SGIP1-211ENST00000484988 PHACTR4Q8IZ21 702 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms