RNA–Protein interactions for RNA: ENST00000484954.1

VPS50-216, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-216ENST00000484954 SIAH1Q8IUQ4 282 aa5.86□□□□□ -1.47
VPS50-216ENST00000484954 FLAD1Q8NFF5 587 aa5.86□□□□□ -1.47
VPS50-216ENST00000484954 FBXO27Q8NI29 283 aa5.86□□□□□ -1.47
VPS50-216ENST00000484954 ACSF2Q96CM8 615 aaPredicted RBP5.86□□□□□ -1.47
VPS50-216ENST00000484954 HRASLS5Q96KN8 279 aa5.86□□□□□ -1.47
VPS50-216ENST00000484954 TMEM74Q96NL1 305 aa5.86□□□□□ -1.47
VPS50-216ENST00000484954 PPP1R16BQ96T49 567 aa5.86□□□□□ -1.47
VPS50-216ENST00000484954 UPK3BL1B0FP48 263 aa5.85□□□□□ -1.47
VPS50-216ENST00000484954 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.85□□□□□ -1.47
VPS50-216ENST00000484954 UPK3BL2E5RIL1 263 aa5.85□□□□□ -1.47
VPS50-216ENST00000484954 INHBBP09529 407 aa5.85□□□□□ -1.47
VPS50-216ENST00000484954 C1QTNF9P0C862 333 aa5.85□□□□□ -1.47
VPS50-216ENST00000484954 GARTP22102 1010 aa5.85□□□□□ -1.47
VPS50-216ENST00000484954 SLC23A3Q6PIS1 610 aa5.85□□□□□ -1.47
VPS50-216ENST00000484954 CDH24Q86UP0 819 aa5.85□□□□□ -1.47
VPS50-216ENST00000484954 MRPL41Q8IXM3 137 aaKnown RBP5.85□□□□□ -1.47
VPS50-216ENST00000484954 MFSD2AQ8NA29 543 aa5.85□□□□□ -1.47
VPS50-216ENST00000484954 TMEM87BQ96K49 555 aa5.85□□□□□ -1.47
VPS50-216ENST00000484954 RSRP1Q9BUV0 290 aa5.85□□□□□ -1.47
VPS50-216ENST00000484954 KBTBD4Q9NVX7 518 aa5.85□□□□□ -1.47
VPS50-216ENST00000484954 TPX2Q9ULW0 747 aaKnown RBP5.85□□□□□ -1.47
VPS50-216ENST00000484954 MAPK8IP1Q9UQF2 711 aa5.85□□□□□ -1.47
VPS50-216ENST00000484954 POLR3KQ9Y2Y1 108 aaPredicted RBP5.85□□□□□ -1.47
VPS50-216ENST00000484954 TACC3Q9Y6A5 838 aa5.85□□□□□ -1.47
VPS50-216ENST00000484954 PITPNM2Q9BZ72 1349 aa5.84□□□□□ -1.47
VPS50-216ENST00000484954 GNAT3A8MTJ3 354 aa5.84□□□□□ -1.47
VPS50-216ENST00000484954 GRIN3BO60391 1043 aa5.84□□□□□ -1.47
VPS50-216ENST00000484954 LDLRAD1Q5T700 205 aa5.84□□□□□ -1.47
VPS50-216ENST00000484954 FYB2Q5VWT5 728 aa5.84□□□□□ -1.47
VPS50-216ENST00000484954 ERMP1Q7Z2K6 904 aa5.84□□□□□ -1.47
VPS50-216ENST00000484954 GATAD2BQ8WXI9 593 aa5.84□□□□□ -1.47
VPS50-216ENST00000484954 CAPN6Q9Y6Q1 641 aa5.84□□□□□ -1.47
VPS50-216ENST00000484954 DNAJA2O60884 412 aa5.83□□□□□ -1.48
VPS50-216ENST00000484954 CBX7O95931 251 aa5.83□□□□□ -1.48
VPS50-216ENST00000484954 ZNF16P17020 682 aaPredicted RBP5.83□□□□□ -1.48
VPS50-216ENST00000484954 SFRP5Q5T4F7 317 aa5.83□□□□□ -1.48
VPS50-216ENST00000484954 TMCO4Q5TGY1 634 aa5.83□□□□□ -1.48
VPS50-216ENST00000484954 CDKAL1Q5VV42 579 aa5.83□□□□□ -1.48
VPS50-216ENST00000484954 CCDC84Q86UT8 332 aaPredicted RBP5.83□□□□□ -1.48
VPS50-216ENST00000484954 RELL1Q8IUW5 271 aa5.83□□□□□ -1.48
VPS50-216ENST00000484954 MCATQ8IVS2 390 aaKnown RBP5.83□□□□□ -1.48
VPS50-216ENST00000484954 GOLM1Q8NBJ4 401 aa5.83□□□□□ -1.48
VPS50-216ENST00000484954 DNAJB8Q8NHS0 232 aa5.83□□□□□ -1.48
VPS50-216ENST00000484954 HSPA12BQ96MM6 686 aa5.83□□□□□ -1.48
VPS50-216ENST00000484954 ATP13A1Q9HD20 1204 aa5.83□□□□□ -1.48
VPS50-216ENST00000484954 SEMA3GQ9NS98 782 aa5.83□□□□□ -1.48
VPS50-216ENST00000484954 JAG2Q9Y219 1238 aa5.83□□□□□ -1.48
VPS50-216ENST00000484954 SNX11Q9Y5W9 270 aa5.83□□□□□ -1.48
VPS50-216ENST00000484954 NPIPB6E9PJ23 425 aa5.82□□□□□ -1.48
VPS50-216ENST00000484954 TLR3O15455 904 aaKnown RBP5.82□□□□□ -1.48
VPS50-216ENST00000484954 PLCG1P19174 1290 aa5.82□□□□□ -1.48
VPS50-216ENST00000484954 CTSWP56202 376 aa5.82□□□□□ -1.48
VPS50-216ENST00000484954 IKZF1Q13422 519 aa5.82□□□□□ -1.48
VPS50-216ENST00000484954 SNAP47Q5SQN1 464 aa5.82□□□□□ -1.48
VPS50-216ENST00000484954 SLC6A19Q695T7 634 aa5.82□□□□□ -1.48
VPS50-216ENST00000484954 FBXL19Q6PCT2 694 aa5.82□□□□□ -1.48
VPS50-216ENST00000484954 MPZL3Q6UWV2 235 aa5.82□□□□□ -1.48
VPS50-216ENST00000484954 MFSD4AQ8N468 514 aa5.82□□□□□ -1.48
VPS50-216ENST00000484954 PPP1R13LQ8WUF5 828 aa5.82□□□□□ -1.48
VPS50-216ENST00000484954 ST14Q9Y5Y6 855 aa5.82□□□□□ -1.48
VPS50-216ENST00000484954 WASH4PA8MWX3 477 aa5.81□□□□□ -1.48
VPS50-216ENST00000484954 FAM155AB1AL88 458 aaPredicted RBP5.81□□□□□ -1.48
VPS50-216ENST00000484954 H3BS24 57 aa5.81□□□□□ -1.48
VPS50-216ENST00000484954 NFIBO00712 420 aa5.81□□□□□ -1.48
VPS50-216ENST00000484954 BPNT1O95861 308 aa5.81□□□□□ -1.48
VPS50-216ENST00000484954 CLCN7P51798 805 aa5.81□□□□□ -1.48
VPS50-216ENST00000484954 PDE4BQ07343 736 aa5.81□□□□□ -1.48
VPS50-216ENST00000484954 TNK2Q07912 1038 aa5.81□□□□□ -1.48
VPS50-216ENST00000484954 ZNF326Q5BKZ1 582 aaKnown RBP5.81□□□□□ -1.48
VPS50-216ENST00000484954 C22orf34Q6ZV56 151 aa5.81□□□□□ -1.48
VPS50-216ENST00000484954 Q96M66 194 aa5.81□□□□□ -1.48
VPS50-216ENST00000484954 REV1Q9UBZ9 1251 aa5.81□□□□□ -1.48
VPS50-216ENST00000484954 RAPGEFL1Q9UHV5 662 aa5.81□□□□□ -1.48
VPS50-216ENST00000484954 ADAM30Q9UKF2 790 aa5.81□□□□□ -1.48
VPS50-216ENST00000484954 CTNND2Q9UQB3 1225 aa5.81□□□□□ -1.48
VPS50-216ENST00000484954 ZBTB7CA1YPR0 619 aa5.8□□□□□ -1.48
VPS50-216ENST00000484954 CHURC1-FNTBB4DL54 471 aa5.8□□□□□ -1.48
VPS50-216ENST00000484954 HTR3BO95264 441 aa5.8□□□□□ -1.48
VPS50-216ENST00000484954 KRT1P04264 644 aa5.8□□□□□ -1.48
VPS50-216ENST00000484954 CRKP46108 304 aa5.8□□□□□ -1.48
VPS50-216ENST00000484954 MFAP1P55081 439 aaKnown RBP5.8□□□□□ -1.48
VPS50-216ENST00000484954 ZP2Q05996 745 aa5.8□□□□□ -1.48
VPS50-216ENST00000484954 TMEM201Q5SNT2 666 aa5.8□□□□□ -1.48
VPS50-216ENST00000484954 REC114Q7Z4M0 266 aa5.8□□□□□ -1.48
VPS50-216ENST00000484954 FAM13CQ8NE31 585 aa5.8□□□□□ -1.48
VPS50-216ENST00000484954 ASB11Q8WXH4 323 aa5.8□□□□□ -1.48
VPS50-216ENST00000484954 KCNK12Q9HB15 430 aa5.8□□□□□ -1.48
VPS50-216ENST00000484954 ADAMTS1Q9UHI8 967 aa5.8□□□□□ -1.48
VPS50-216ENST00000484954 PRR36Q9H6K5 1346 aa5.79□□□□□ -1.48
VPS50-216ENST00000484954 PWP1Q13610 501 aa5.79□□□□□ -1.48
VPS50-216ENST00000484954 FAM196AQ6ZSG2 479 aa5.79□□□□□ -1.48
VPS50-216ENST00000484954 DIRC2Q96SL1 478 aa5.79□□□□□ -1.48
VPS50-216ENST00000484954 CARS2Q9HA77 564 aaKnown RBP5.79□□□□□ -1.48
VPS50-216ENST00000484954 KCNQ5Q9NR82 932 aa5.79□□□□□ -1.48
VPS50-216ENST00000484954 KLHL3Q9UH77 587 aa5.79□□□□□ -1.48
VPS50-216ENST00000484954 GGT7Q9UJ14 662 aa5.79□□□□□ -1.48
VPS50-216ENST00000484954 GREM1O60565 184 aa5.78□□□□□ -1.48
VPS50-216ENST00000484954 LRRN2O75325 713 aa5.78□□□□□ -1.48
VPS50-216ENST00000484954 GLI1P08151 1106 aa5.78□□□□□ -1.48
VPS50-216ENST00000484954 EIF4A3P38919 411 aaKnown RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms